RNA–Protein interactions for RNA: ENST00000522246.5

CD74-208, Transcript of CD74 molecule, human

TSL 4

Gene CD74, Length 563 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD74-208	ENST00000522246	KBTBD7	Q8WVZ9	684 aa		11.28	□□□□□ -0.6
CD74-208	ENST00000522246	TRIM11	Q96F44	468 aa		11.28	□□□□□ -0.6
CD74-208	ENST00000522246	VCPIP1	Q96JH7	1222 aa		11.28	□□□□□ -0.6
CD74-208	ENST00000522246	SLC9A7	Q96T83	725 aa		11.28	□□□□□ -0.6
CD74-208	ENST00000522246	ACBD6	Q9BR61	282 aa		11.28	□□□□□ -0.6
CD74-208	ENST00000522246	ELOVL4	Q9GZR5	314 aa		11.28	□□□□□ -0.6
CD74-208	ENST00000522246	MIS12	Q9H081	205 aa		11.28	□□□□□ -0.6
CD74-208	ENST00000522246	ISCU	Q9H1K1	167 aa		11.28	□□□□□ -0.6
CD74-208	ENST00000522246	SPTLC3	Q9NUV7	552 aa		11.28	□□□□□ -0.6
CD74-208	ENST00000522246	ADAM28	Q9UKQ2	775 aa		11.28	□□□□□ -0.6
CD74-208	ENST00000522246	CDH9	Q9ULB4	789 aa		11.28	□□□□□ -0.6
CD74-208	ENST00000522246	INSL6	Q9Y581	213 aa		11.28	□□□□□ -0.6
CD74-208	ENST00000522246	SLC4A7	Q9Y6M7	1214 aa		11.28	□□□□□ -0.6
CD74-208	ENST00000522246	ALPK3	Q96L96	1907 aa		11.28	□□□□□ -0.6
CD74-208	ENST00000522246	BTNL10	A8MVZ5	291 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	FTL	P02792	175 aa	Predicted RBP	11.27	□□□□□ -0.61
CD74-208	ENST00000522246	CYP1A1	P04798	512 aa	Predicted RBP	11.27	□□□□□ -0.61
CD74-208	ENST00000522246	MME	P08473	750 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	PDGFRB	P09619	1106 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	LAG3	P18627	525 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	BCAR1	P56945	870 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	BTG3	Q14201	252 aa	Predicted RBP	11.27	□□□□□ -0.61
CD74-208	ENST00000522246	MAPRE1	Q15691	268 aa	Known RBP	11.27	□□□□□ -0.61
CD74-208	ENST00000522246	IFI16	Q16666	785 aa	Known RBP	11.27	□□□□□ -0.61
CD74-208	ENST00000522246	CLEC16A	Q2KHT3	1053 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	SPOUT1	Q5T280	376 aa	Known RBP	11.27	□□□□□ -0.61
CD74-208	ENST00000522246	ARHGAP17	Q68EM7	881 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	REXO1L1P	Q8IX06	675 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	TMEM130	Q8N3G9	435 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	C3orf58	Q8NDZ4	430 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	ACRBP	Q8NEB7	543 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	LNX1	Q8TBB1	728 aa	Predicted RBP	11.27	□□□□□ -0.61
CD74-208	ENST00000522246	SLC20A1	Q8WUM9	679 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	UBE2Q2	Q8WVN8	375 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	NOX5	Q96PH1	765 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	YME1L1	Q96TA2	773 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	PAAF1	Q9BRP4	392 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	DESI2	Q9BSY9	194 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	ZBED2	Q9BTP6	218 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	TRMT1	Q9NXH9	659 aa	Known RBP	11.27	□□□□□ -0.61
CD74-208	ENST00000522246	MYO1A	Q9UBC5	1043 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	HESX1	Q9UBX0	185 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	DNAJB4	Q9UDY4	337 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	NENF	Q9UMX5	172 aa		11.27	□□□□□ -0.61
CD74-208	ENST00000522246	SF3B1	O75533	1304 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
CD74-208	ENST00000522246		H7C4K7	107 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	ZNF263	O14978	683 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	OAZ2	O95190	189 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	GJB5	O95377	273 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	TMEM253	P0C7T8	217 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	SETSIP	P0DME0	302 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	MYBL1	P10243	752 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	UNG	P13051	313 aa	Predicted RBP	11.26	□□□□□ -0.61
CD74-208	ENST00000522246	PTPN1	P18031	435 aa	Known RBP	11.26	□□□□□ -0.61
CD74-208	ENST00000522246	CDH5	P33151	784 aa	Predicted RBP	11.26	□□□□□ -0.61
CD74-208	ENST00000522246	NSF	P46459	744 aa	Known RBP	11.26	□□□□□ -0.61
CD74-208	ENST00000522246	BRCC3	P46736	316 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	SLC11A1	P49279	550 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	GATM	P50440	423 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	SLC8A3	P57103	927 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	GPC5	P78333	572 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	DEFB103A	P81534	67 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	HTRA4	P83105	476 aa	Predicted RBP	11.26	□□□□□ -0.61
CD74-208	ENST00000522246	TSPY1	Q01534	308 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	CENPC	Q03188	943 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	PAN2	Q504Q3	1202 aa	Known RBP	11.26	□□□□□ -0.61
CD74-208	ENST00000522246	LIN9	Q5TKA1	542 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	OVOS1	Q6IE37	1185 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.26	□□□□□ -0.61
CD74-208	ENST00000522246	ACOT1	Q86TX2	421 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	GPIHBP1	Q8IV16	184 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	11.26	□□□□□ -0.61
CD74-208	ENST00000522246	CYFIP2	Q96F07	1278 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	PPP1R13B	Q96KQ4	1090 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	ZNF558	Q96NG5	402 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	TWNK	Q96RR1	684 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	PCDHB18P	Q96TA0	734 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	RAD9A	Q99638	391 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
CD74-208	ENST00000522246	CWH43	Q9H720	699 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	RC3H2	Q9HBD1	1191 aa	Known RBP	11.26	□□□□□ -0.61
CD74-208	ENST00000522246	ACP6	Q9NPH0	428 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246	DDX43	Q9NXZ2	648 aa	Known RBP	11.26	□□□□□ -0.61
CD74-208	ENST00000522246	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.26	□□□□□ -0.61
CD74-208	ENST00000522246	PRG3	Q9Y2Y8	225 aa	Predicted RBP	11.26	□□□□□ -0.61
CD74-208	ENST00000522246	REXO2	Q9Y3B8	237 aa	Known RBP	11.26	□□□□□ -0.61
CD74-208	ENST00000522246	PCDHB12	Q9Y5F1	795 aa		11.26	□□□□□ -0.61
CD74-208	ENST00000522246		A0A0A6YYK5	440 aa	Predicted RBP	11.25	□□□□□ -0.61
CD74-208	ENST00000522246	OR6C75	A6NL08	312 aa		11.25	□□□□□ -0.61
CD74-208	ENST00000522246		O00370	1275 aa		11.25	□□□□□ -0.61
CD74-208	ENST00000522246	KIF5C	O60282	957 aa		11.25	□□□□□ -0.61
CD74-208	ENST00000522246	CALB1	P05937	261 aa		11.25	□□□□□ -0.61
CD74-208	ENST00000522246	SYN1	P17600	705 aa		11.25	□□□□□ -0.61
CD74-208	ENST00000522246	FGFR3	P22607	806 aa		11.25	□□□□□ -0.61
CD74-208	ENST00000522246	BRD2	P25440	801 aa	Known RBP	11.25	□□□□□ -0.61
CD74-208	ENST00000522246	LMO2	P25791	158 aa		11.25	□□□□□ -0.61
CD74-208	ENST00000522246	PPM1A	P35813	382 aa		11.25	□□□□□ -0.61
CD74-208	ENST00000522246	GALC	P54803	685 aa		11.25	□□□□□ -0.61
CD74-208	ENST00000522246	YWHAH	Q04917	246 aa	Predicted RBP	11.25	□□□□□ -0.61
CD74-208	ENST00000522246	C1QBP	Q07021	282 aa	Known RBP	11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms