RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 SAMSN1Q9NSI8 373 aaKnown RBP7.32□□□□□ -1.24
SPIDR-218ENST00000522222 HSPBP1Q9NZL4 362 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 FNIP2Q9P278 1114 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 PRKAG3Q9UGI9 489 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.32□□□□□ -1.24
SPIDR-218ENST00000522222 FBXW11Q9UKB1 542 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 CTNND2Q9UQB3 1225 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 FHOD1Q9Y613 1164 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 C2orf16Q68DN1 1984 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 PTPRJQ12913 1337 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 ANO9A1A5B4 782 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 KCNJ18B7U540 433 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 TULP1O00294 542 aaPredicted RBP7.31□□□□□ -1.24
SPIDR-218ENST00000522222 SYN3O14994 580 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 KIAA0391O15091 583 aaKnown RBP7.31□□□□□ -1.24
SPIDR-218ENST00000522222 SPTLC1O15269 473 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 TGM5O43548 720 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 RFPL2O75678 378 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 SPATA31D3P0C874 917 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 SP100P23497 879 aaPredicted RBP7.31□□□□□ -1.24
SPIDR-218ENST00000522222 SSTR3P32745 418 aaPredicted RBP7.31□□□□□ -1.24
SPIDR-218ENST00000522222 CYLC1P35663 651 aaPredicted RBP7.31□□□□□ -1.24
SPIDR-218ENST00000522222 COPB1P53618 953 aaKnown RBP7.31□□□□□ -1.24
SPIDR-218ENST00000522222 ADKP55263 362 aaKnown RBP7.31□□□□□ -1.24
SPIDR-218ENST00000522222 TFAMQ00059 246 aaKnown RBP7.31□□□□□ -1.24
SPIDR-218ENST00000522222 POU5F1Q01860 360 aaKnown RBP7.31□□□□□ -1.24
SPIDR-218ENST00000522222 ITIH3Q06033 890 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 CKAP4Q07065 602 aaKnown RBP7.31□□□□□ -1.24
SPIDR-218ENST00000522222 STK4Q13043 487 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 KCNJ12Q14500 433 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 KRT31Q15323 416 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 KNOP1Q1ED39 458 aaKnown RBP7.31□□□□□ -1.24
SPIDR-218ENST00000522222 TCP11X2Q5H9J9 407 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 FIGNQ5HY92 759 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 C9orf57Q5W0N0 161 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 CCDC70Q6NSX1 233 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 CES5AQ6NT32 575 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 CC2D1AQ6P1N0 951 aaPredicted RBP7.31□□□□□ -1.24
SPIDR-218ENST00000522222 PDXDC1Q6P996 788 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 ELMSAN1Q6PJG2 1045 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 RSPO2Q6UXX9 243 aaPredicted RBP7.31□□□□□ -1.24
SPIDR-218ENST00000522222 TMC5Q6UXY8 1006 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 SPATA31D4Q6ZUB0 917 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 TOGARAM2Q6ZUX3 1019 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 ANKS3Q6ZW76 656 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 HS2ST1Q7LGA3 356 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 PALB2Q86YC2 1186 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 CCDC170Q8IYT3 715 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 GJD3Q8N144 294 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 GPD1LQ8N335 351 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 MSANTD4Q8NCY6 345 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 NELFBQ8WX92 580 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 POP1Q99575 1024 aaKnown RBP7.31□□□□□ -1.24
SPIDR-218ENST00000522222 PHF7Q9BWX1 381 aaPredicted RBP7.31□□□□□ -1.24
SPIDR-218ENST00000522222 TSGA10Q9BZW7 698 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 MTMR12Q9C0I1 747 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 TSPYL1Q9H0U9 437 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 POMKQ9H5K3 350 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 HAUS4Q9H6D7 363 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 PDE11AQ9HCR9 933 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 ABHD10Q9NUJ1 306 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 PSD3Q9NYI0 1048 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 BACE2Q9Y5Z0 518 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 CDY1Q9Y6F8 540 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 MUC3AQ02505 3323 aa7.31□□□□□ -1.24
SPIDR-218ENST00000522222 SCN1AP35498 2009 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 A0A1W2PQJ5 194 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 CTAGE15A4D2H0 777 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 LGALS16A8MUM7 142 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 M0QZQ0 153 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 CLIC2O15247 247 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 KRT86O43790 486 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 RHOBTB3O94955 611 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 LDHAP00338 332 aaKnown RBP7.3□□□□□ -1.24
SPIDR-218ENST00000522222 GYPCP04921 128 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 CTAGE8P0CG41 777 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 POLR2BP30876 1174 aaKnown RBP7.3□□□□□ -1.24
SPIDR-218ENST00000522222 CASP14P31944 242 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 OR1D2P34982 312 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 MTHFRP42898 656 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 ROR1Q01973 937 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 RAB33AQ14088 237 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 NAA30Q147X3 362 aaPredicted RBP7.3□□□□□ -1.24
SPIDR-218ENST00000522222 SNRNP35Q16560 246 aaKnown RBP7.3□□□□□ -1.24
SPIDR-218ENST00000522222 CTXN3Q4LDR2 81 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 LIN9Q5TKA1 542 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 LMBRD2Q68DH5 695 aaPredicted RBP7.3□□□□□ -1.24
SPIDR-218ENST00000522222 SLC8B1Q6J4K2 584 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 KLHL10Q6JEL2 608 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 ZNF280DQ6N043 979 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 LILRA6Q6PI73 481 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 HDXQ7Z353 690 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 GPR149Q86SP6 731 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 CTAGE6Q86UF2 777 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 NT5DC4Q86YG4 428 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 CTAGE4Q8IX94 777 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 C12orf56Q8IXR9 622 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 ADSSL1Q8N142 457 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 C1orf127Q8N9H9 656 aa7.3□□□□□ -1.24
SPIDR-218ENST00000522222 KREMEN2Q8NCW0 462 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms