RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 ERICH1Q86X53 443 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 RAB11FIP4Q86YS3 637 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 EXD3Q8N9H8 876 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 LEO1Q8WVC0 666 aaPredicted RBP8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 PIBF1Q8WXW3 757 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 ESR2Q92731 530 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 FGF11Q92914 225 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 FAM83CQ9BQN1 747 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 MINDY3Q9H8M7 445 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 IL21RQ9HBE5 538 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 IFT122Q9HBG6 1241 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 SENP2Q9HC62 589 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 ZSWIM5Q9P217 1185 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 PCDHA6Q9UN73 950 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 CEP131Q9UPN4 1083 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 PCDHA8Q9Y5H6 950 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 MTORP42345 2549 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 IGKV6-21A0A0C4DH24 114 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 MEIS1O00470 390 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 SH2B2O14492 632 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 SUV39H1O43463 412 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 NR1I2O75469 434 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 PRAMEF12O95522 483 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 LRG1P02750 347 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 PCP11498 1178 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 FGFR3P22607 806 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 SLC19A1P41440 591 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 GUCY1B3Q02153 619 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 RTP5Q14D33 572 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 SEC23AQ15436 765 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 SPDYCQ5MJ68 293 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 MIS18BP1Q6P0N0 1132 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 DHRS13Q6UX07 377 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 CD300LGQ6UXG3 332 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 IGDCC4Q8TDY8 1250 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 SNRNP27Q8WVK2 155 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 BAP1Q92560 729 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 CUL5Q93034 780 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 NXPE2Q96DL1 559 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 PGBD1Q96JS3 809 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 LPIN3Q9BQK8 851 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 FUCA2Q9BTY2 467 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 POLR3CQ9BUI4 534 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 CXCL16Q9H2A7 254 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 ZSCAN16Q9H4T2 348 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 ZNF768Q9H5H4 540 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 UBN1Q9NPG3 1134 aa8.03□□□□□ -1.12
CTNNA1-227ENST00000521387 CELSR2Q9HCU4 2923 aa8.02□□□□□ -1.12
CTNNA1-227ENST00000521387 MYO16Q9Y6X6 1858 aa8.02□□□□□ -1.12
CTNNA1-227ENST00000521387 TDRD15B5MCY1 1934 aaKnown RBP8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 KIAA1549LQ6ZVL6 1849 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 BLACEA4D250 179 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 GOLGA8BA8MQT2 603 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 DGAT1O75907 488 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 LETM1O95202 739 aaPredicted RBP8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 SYPP08247 313 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 DRD1P21728 446 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 GGCXP38435 758 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 DPP6P42658 865 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 ROR1Q01973 937 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 TRDNQ13061 729 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 PREPLQ4J6C6 727 aaPredicted RBP8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 CCDC178Q5BJE1 867 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 TRIM68Q6AZZ1 485 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 ATG14Q6ZNE5 492 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 ZNF410Q86VK4 478 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 IQCA1Q86XH1 822 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 SLC41A1Q8IVJ1 513 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 TCEAL8Q8IYN2 117 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 RNF214Q8ND24 703 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 ZNF461Q8TAF7 563 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 SETD7Q8WTS6 366 aaKnown RBP8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 TMEM176AQ96HP8 235 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 SPATA32Q96LK8 384 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 SCAND2PQ9GZW5 306 aaPredicted RBP8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 GKN1Q9NS71 199 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 ORC3Q9UBD5 711 aaPredicted RBP8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 GABBR1Q9UBS5 961 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 TBX20Q9UMR3 447 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 BTBD3Q9Y2F9 522 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 INSL5Q9Y5Q6 135 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 BACE2Q9Y5Z0 518 aa8.02□□□□□ -1.13
CTNNA1-227ENST00000521387 MYH9P35579 1960 aaKnown RBP8.01□□□□□ -1.13
CTNNA1-227ENST00000521387 A0A1B0GTL3 188 aa8.01□□□□□ -1.13
CTNNA1-227ENST00000521387 A0A1W2PRU2 124 aa8.01□□□□□ -1.13
CTNNA1-227ENST00000521387 FAM187AA6NFU0 413 aa8.01□□□□□ -1.13
CTNNA1-227ENST00000521387 CASTOR2A6NHX0 329 aa8.01□□□□□ -1.13
CTNNA1-227ENST00000521387 STBD1O95210 358 aa8.01□□□□□ -1.13
CTNNA1-227ENST00000521387 ATF2P15336 505 aa8.01□□□□□ -1.13
CTNNA1-227ENST00000521387 AKAP5P24588 427 aa8.01□□□□□ -1.13
CTNNA1-227ENST00000521387 KIF5BP33176 963 aa8.01□□□□□ -1.13
CTNNA1-227ENST00000521387 GRIK2Q13002 908 aa8.01□□□□□ -1.13
CTNNA1-227ENST00000521387 RUNX3Q13761 415 aa8.01□□□□□ -1.13
CTNNA1-227ENST00000521387 UGCGQ16739 394 aa8.01□□□□□ -1.13
CTNNA1-227ENST00000521387 FBXO43Q4G163 708 aa8.01□□□□□ -1.13
CTNNA1-227ENST00000521387 CEP55Q53EZ4 464 aa8.01□□□□□ -1.13
CTNNA1-227ENST00000521387 KIAA1614Q5VZ46 1190 aa8.01□□□□□ -1.13
CTNNA1-227ENST00000521387 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.01□□□□□ -1.13
CTNNA1-227ENST00000521387 HAUS6Q7Z4H7 955 aa8.01□□□□□ -1.13
CTNNA1-227ENST00000521387 TMPRSS12Q86WS5 348 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms