RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 LAYNQ6UX15 382 aa6.33□□□□□ -1.4
SKP1-208ENST00000521216 PPP1R32Q7Z5V6 425 aa6.33□□□□□ -1.4
SKP1-208ENST00000521216 Q8NA96 180 aa6.33□□□□□ -1.4
SKP1-208ENST00000521216 POC1BQ8TC44 478 aa6.33□□□□□ -1.4
SKP1-208ENST00000521216 PARD3BQ8TEW8 1205 aa6.33□□□□□ -1.4
SKP1-208ENST00000521216 RAPGEF4Q8WZA2 1011 aa6.33□□□□□ -1.4
SKP1-208ENST00000521216 SNX19Q92543 992 aa6.33□□□□□ -1.4
SKP1-208ENST00000521216 LENG9Q96B70 501 aa6.33□□□□□ -1.4
SKP1-208ENST00000521216 PTCD3Q96EY7 689 aaKnown RBP6.33□□□□□ -1.4
SKP1-208ENST00000521216 TBCBQ99426 244 aa6.33□□□□□ -1.4
SKP1-208ENST00000521216 AFF4Q9UHB7 1163 aaKnown RBP6.33□□□□□ -1.4
SKP1-208ENST00000521216 A0A1W2PS29 197 aa6.32□□□□□ -1.4
SKP1-208ENST00000521216 ITGAMP11215 1152 aa6.32□□□□□ -1.4
SKP1-208ENST00000521216 PHKG2P15735 406 aa6.32□□□□□ -1.4
SKP1-208ENST00000521216 MAKP20794 623 aa6.32□□□□□ -1.4
SKP1-208ENST00000521216 GCLCP48506 637 aaPredicted RBP6.32□□□□□ -1.4
SKP1-208ENST00000521216 NEK3P51956 506 aa6.32□□□□□ -1.4
SKP1-208ENST00000521216 VAV2P52735 878 aa6.32□□□□□ -1.4
SKP1-208ENST00000521216 IQCB1Q15051 598 aa6.32□□□□□ -1.4
SKP1-208ENST00000521216 PTPAQ15257 358 aa6.32□□□□□ -1.4
SKP1-208ENST00000521216 IGFL4Q6B9Z1 124 aa6.32□□□□□ -1.4
SKP1-208ENST00000521216 MRGPREQ86SM8 312 aa6.32□□□□□ -1.4
SKP1-208ENST00000521216 SESTD1Q86VW0 696 aa6.32□□□□□ -1.4
SKP1-208ENST00000521216 ADGRG5Q8IZF4 528 aa6.32□□□□□ -1.4
SKP1-208ENST00000521216 HEPHQ9BQS7 1158 aa6.32□□□□□ -1.4
SKP1-208ENST00000521216 SPATA5L1Q9BVQ7 753 aa6.32□□□□□ -1.4
SKP1-208ENST00000521216 WDR11Q9BZH6 1224 aa6.32□□□□□ -1.4
SKP1-208ENST00000521216 MS4A7Q9GZW8 240 aaPredicted RBP6.32□□□□□ -1.4
SKP1-208ENST00000521216 UNKLQ9H9P5 680 aaKnown RBP6.32□□□□□ -1.4
SKP1-208ENST00000521216 SMURF2Q9HAU4 748 aa6.32□□□□□ -1.4
SKP1-208ENST00000521216 TBCCD1Q9NVR7 557 aa6.32□□□□□ -1.4
SKP1-208ENST00000521216 HESX1Q9UBX0 185 aa6.32□□□□□ -1.4
SKP1-208ENST00000521216 KPNA5O15131 536 aa6.31□□□□□ -1.4
SKP1-208ENST00000521216 NARSO43776 548 aaKnown RBP6.31□□□□□ -1.4
SKP1-208ENST00000521216 GATA3P23771 443 aa6.31□□□□□ -1.4
SKP1-208ENST00000521216 PIK3CBP42338 1070 aa6.31□□□□□ -1.4
SKP1-208ENST00000521216 NPTX2P47972 431 aa6.31□□□□□ -1.4
SKP1-208ENST00000521216 NDUFV1P49821 464 aa6.31□□□□□ -1.4
SKP1-208ENST00000521216 TOB1P50616 345 aaPredicted RBP6.31□□□□□ -1.4
SKP1-208ENST00000521216 RPS16P62249 146 aaKnown RBP6.31□□□□□ -1.4
SKP1-208ENST00000521216 TMEM108Q6UXF1 575 aa6.31□□□□□ -1.4
SKP1-208ENST00000521216 MICALCLQ6ZW33 695 aa6.31□□□□□ -1.4
SKP1-208ENST00000521216 GPR149Q86SP6 731 aa6.31□□□□□ -1.4
SKP1-208ENST00000521216 ARHGEF19Q8IW93 802 aa6.31□□□□□ -1.4
SKP1-208ENST00000521216 FAM9AQ8IZU1 332 aaPredicted RBP6.31□□□□□ -1.4
SKP1-208ENST00000521216 LCORLQ8N3X6 602 aa6.31□□□□□ -1.4
SKP1-208ENST00000521216 MAML1Q92585 1016 aa6.31□□□□□ -1.4
SKP1-208ENST00000521216 PHKBQ93100 1093 aa6.31□□□□□ -1.4
SKP1-208ENST00000521216 MOGAT1Q96PD6 335 aa6.31□□□□□ -1.4
SKP1-208ENST00000521216 NAA15Q9BXJ9 866 aaKnown RBP6.31□□□□□ -1.4
SKP1-208ENST00000521216 STK31Q9BXU1 1019 aa6.31□□□□□ -1.4
SKP1-208ENST00000521216 DPH1Q9BZG8 443 aa6.31□□□□□ -1.4
SKP1-208ENST00000521216 ZNF518BQ9C0D4 1074 aa6.31□□□□□ -1.4
SKP1-208ENST00000521216 CASS4Q9NQ75 786 aa6.31□□□□□ -1.4
SKP1-208ENST00000521216 TMEM74BQ9NUR3 256 aa6.31□□□□□ -1.4
SKP1-208ENST00000521216 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.31□□□□□ -1.4
SKP1-208ENST00000521216 HS3ST3A1Q9Y663 406 aa6.31□□□□□ -1.4
SKP1-208ENST00000521216 A0A087WWL8 130 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 CCDC194A0A1B0GVG4 234 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 ANO9A1A5B4 782 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 E7ENX8 843 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 DCLK1O15075 740 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 RASSF9O75901 435 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 SLC5A1P13866 664 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 TNFRSF1AP19438 455 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 PXNP49023 591 aaPredicted RBP6.3□□□□□ -1.4
SKP1-208ENST00000521216 ZNF134P52741 427 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 LILRA4P59901 499 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 SATB1Q01826 763 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 TAP2Q03519 686 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 KRT17Q04695 432 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 TCF15Q12870 199 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 IFIT5Q13325 482 aaKnown RBP6.3□□□□□ -1.4
SKP1-208ENST00000521216 DCAF12L1Q5VU92 463 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 GGNQ86UU5 652 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 KRT78Q8N1N4 520 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 ASB10Q8WXI3 467 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 BTBD1Q9H0C5 482 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 SERHL2Q9H4I8 314 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 A1CFQ9NQ94 594 aaKnown RBP6.3□□□□□ -1.4
SKP1-208ENST00000521216 INTS13Q9NVM9 706 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 ZSCAN32Q9NX65 697 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 DKK2Q9UBU2 259 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 ITGB1BP2Q9UKP3 347 aa6.3□□□□□ -1.4
SKP1-208ENST00000521216 A0A0B4J269 797 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 TRIM43BA6NCK2 446 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 PYCARD-AS1I3L0S3 204 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 TRIAP1O43715 76 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 SOAT2O75908 522 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 ADH4P08319 380 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 ATXN1LP0C7T5 689 aaKnown RBP6.29□□□□□ -1.4
SKP1-208ENST00000521216 XRCC6P12956 609 aaKnown RBP eCLIP6.29□□□□□ -1.4
SKP1-208ENST00000521216 C6P13671 934 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 RPL17P18621 184 aaKnown RBP6.29□□□□□ -1.4
SKP1-208ENST00000521216 MCM7P33993 719 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 TUBB3Q13509 450 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 HLXQ14774 488 aaPredicted RBP6.29□□□□□ -1.4
SKP1-208ENST00000521216 LONRF1Q17RB8 773 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 SYCP2LQ5T4T6 812 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 SP5Q6BEB4 398 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms