RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 KCNF1Q9H3M0 494 aa12.65□□□□□ -0.38
ERGIC1-208ENST00000520399 AFF4Q9UHB7 1163 aaKnown RBP12.65□□□□□ -0.38
ERGIC1-208ENST00000520399 CNTNAP4Q9C0A0 1308 aa12.65□□□□□ -0.39
ERGIC1-208ENST00000520399 MYCP01106 439 aaPredicted RBP12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 FMO5P49326 533 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 CCZ1BP86790 482 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 CCZ1P86791 482 aaPredicted RBP12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 SLC18A3Q16572 532 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 PTGISQ16647 500 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 CENPPQ6IPU0 288 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 SLC35G2Q8TBE7 412 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 TUBE1Q9UJT0 475 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 MYMKA6NI61 221 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 TXNP10599 105 aaKnown RBP12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 SULT1E1P49888 294 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 CCNHP51946 323 aaPredicted RBP12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 VSNL1P62760 191 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 EIF2B5Q13144 721 aaKnown RBP12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 LRRC8EQ6NSJ5 796 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 FAM47EQ6ZV65 393 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 PEX5LQ8IYB4 626 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 PDCD6IPQ8WUM4 868 aaKnown RBP12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 RABGEF1Q9UJ41 708 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 SNX12Q9UMY4 172 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 FAM32AQ9Y421 112 aaKnown RBP12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 A0A1W2PQJ5 194 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 RSPH10B2B2RC85 870 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 KPNA4O00629 521 aaPredicted RBP12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 BIRC5O15392 142 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 RSPH10BP0C881 870 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 HOXD10P28358 340 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 NUP107P57740 925 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 NCAPHQ15003 741 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 PDIA6Q15084 440 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 RASGRP2Q7LDG7 609 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 FBXL5Q9UKA1 691 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 RASSF9O75901 435 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 ARSEP51690 589 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 CDH6P55285 790 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 CDC42EP1Q00587 391 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 TP53BP2Q13625 1128 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 INPP5AQ14642 412 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 ASZ1Q8WWH4 475 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 WDR24Q96S15 920 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 ADNPQ9H2P0 1102 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 NDFIP2Q9NV92 336 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 PRR12Q9ULL5 1215 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 SPATA31A6Q5VVP1 1343 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 FOXP2O15409 715 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 PHF2O75151 1096 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 RPS6KA5O75582 802 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 IRGCQ6NXR0 463 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 ELOA2Q8IYF1 753 aaPredicted RBP12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 FAM161BQ96MY7 647 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 BRD8Q9H0E9 1235 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 MAD2L2Q9UI95 211 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 KIF20BQ96Q89 1820 aa12.64□□□□□ -0.39
ERGIC1-208ENST00000520399 ABLIM1O14639 778 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 TBC1D4O60343 1298 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 RFC5P40937 340 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 FXR2P51116 673 aaKnown RBP eCLIP12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 SNRPFP62306 86 aaKnown RBP12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 CDH24Q86UP0 819 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 SPATA4Q8NEY3 305 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 TNIP3Q96KP6 325 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 CEMIPQ8WUJ3 1361 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 CACNA2D1P54289 1103 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 ABCE1P61221 599 aaKnown RBP12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 EMC2Q15006 297 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 STYK1Q6J9G0 422 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 KLHL24Q6TFL4 600 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 FUT8Q9BYC5 575 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 JMJD4Q9H9V9 463 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 UVRAGQ9P2Y5 699 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 SSU72P8A0A1W2PR75 194 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 CCDC189A1A4V9 331 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 RTN3O95197 1032 aaPredicted RBP12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 GHRP10912 638 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 BRAFP15056 766 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 SCTRP47872 440 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 MTA1Q13330 715 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 BTBD8Q5XKL5 378 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 TMEM143Q96AN5 459 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 QKIQ96PU8 341 aaKnown RBP eCLIP12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 SENP2Q9HC62 589 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 TRIM17Q9Y577 477 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 NRXN1Q9ULB1 1477 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 DFFAO00273 331 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 CTDNEP1O95476 244 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 FYNP06241 537 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 RALAP11233 206 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 NQO1P15559 274 aaKnown RBP12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 EIF3EP60228 445 aaKnown RBP12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 RAD51Q06609 339 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 BAATQ14032 418 aaPredicted RBP12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 STILQ15468 1287 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 ANO4Q32M45 955 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 TAS2R42Q7RTR8 314 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 KCTD17Q8N5Z5 321 aa12.63□□□□□ -0.39
ERGIC1-208ENST00000520399 SENP7Q9BQF6 1050 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms