RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 HTTP42858 3142 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 ACKR2O00590 384 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 TREHO43280 583 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 ZEB2O60315 1214 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 FAM189A1O60320 539 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 PRKCBP05771 671 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 CYP2C9P11712 490 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 DRD2P14416 443 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 PROZP22891 400 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 GRK4P32298 578 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 LIG4P49917 911 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 FXR1P51114 621 aaKnown RBP eCLIP8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 GPC3P51654 580 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 NLRP11P59045 1033 aaKnown RBP8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 DLG4P78352 724 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 CCZ1BP86790 482 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 CCZ1P86791 482 aaPredicted RBP8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 PPP2R3AQ06190 1150 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 SNRNP35Q16560 246 aaKnown RBP8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 MAPK6Q16659 721 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 FAM187BQ17R55 369 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 FKBP15Q5T1M5 1219 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 SLFN12LQ6IEE8 588 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 CRELD2Q6UXH1 353 aaPredicted RBP8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 TSHZ1Q6ZSZ6 1077 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 SND1Q7KZF4 910 aaKnown RBP eCLIP8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 SESTD1Q86VW0 696 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 CBWD2Q8IUF1 395 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 ZBTB8OSQ8IWT0 167 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 PLEKHO2Q8TD55 490 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 POMGNT1Q8WZA1 660 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 SAAL1Q96ER3 474 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 MRPL4Q9BYD3 311 aaKnown RBP8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 TTYH3Q9C0H2 523 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 FAM49AQ9H0Q0 323 aaPredicted RBP8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 TMX1Q9H3N1 280 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 GTF2IRD1Q9UHL9 959 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 AKT3Q9Y243 479 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 PTPN22Q9Y2R2 807 aa8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 R3HCC1Q9Y3T6 440 aaKnown RBP8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.52□□□□□ -1.05
CTHRC1-203ENST00000520337 TTC26A0AVF1 554 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 C17orf102A2RUQ5 167 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 INO80B-WBP1J3KQ70 363 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 PES1O00541 588 aaKnown RBP8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 KIAA0391O15091 583 aaKnown RBP8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 EPHB6O15197 1021 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 B4GALT5O43286 388 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 EXTL3O43909 919 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 CSDE1O75534 798 aaKnown RBP8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 NOL4O94818 638 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 AFPP02771 609 aaKnown RBP8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 ASGR1P07306 291 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 CASP14P31944 242 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 VAMP7P51809 220 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 ADKP55263 362 aaKnown RBP8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 CDC42EP1Q00587 391 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 ENPEPQ07075 957 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 CYP24A1Q07973 514 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 BFSP1Q12934 665 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 FIGNQ5HY92 759 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 ZBTB41Q5SVQ8 909 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 CDPF1Q6NVV7 123 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 INTS8Q75QN2 995 aaKnown RBP8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 SRGAP1Q7Z6B7 1085 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 ZNF410Q86VK4 478 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 PPFIBP1Q86W92 1011 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 TMEM139Q8IV31 216 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 GPD1LQ8N335 351 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 C7orf31Q8N865 590 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 PCSK9Q8NBP7 692 aaKnown RBP8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 CCDC150Q8NCX0 1101 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 CPLX3Q8WVH0 158 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 DNAJB3Q8WWF6 145 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 BICD1Q96G01 975 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 PPP1R16BQ96T49 567 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 TRIM56Q9BRZ2 755 aaKnown RBP8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 NUP58Q9BVL2 599 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 INO80BQ9C086 356 aaPredicted RBP8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 NIF3L1Q9GZT8 377 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 ABCB6Q9NP58 842 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 AGO2Q9UKV8 859 aaKnown RBP8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 PYCARDQ9ULZ3 195 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 CAPN11Q9UMQ6 739 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 CENPFP49454 3210 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 RALGAPA2Q2PPJ7 1873 aa8.51□□□□□ -1.05
CTHRC1-203ENST00000520337 GTPBP10A4D1E9 387 aaKnown RBP8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 AKR1B15C9JRZ8 316 aaPredicted RBP8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 PMM2O15305 246 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 MFAP3LO75121 409 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 TOM1L1O75674 476 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 TRIM49P0CI25 452 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 TRIM49CP0CI26 452 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 GNAT1P11488 350 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 KRT13P13646 458 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 SFPQP23246 707 aaKnown RBP eCLIP8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 PON1P27169 355 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 FMO5P49326 533 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 ACOT2P49753 483 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 ACLYP53396 1101 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms