RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 BCL7CQ8WUZ0 217 aaPredicted RBP22.88■■□□□ 1.25
PTP4A3-203ENST00000520105 GPR62Q9BZJ7 368 aa22.88■■□□□ 1.25
PTP4A3-203ENST00000520105 LCA5LO95447 670 aa22.87■■□□□ 1.25
PTP4A3-203ENST00000520105 FAM163BP0C2L3 166 aa22.87■■□□□ 1.25
PTP4A3-203ENST00000520105 ACAT1P24752 427 aaKnown RBP22.87■■□□□ 1.25
PTP4A3-203ENST00000520105 HTRA4P83105 476 aaPredicted RBP22.87■■□□□ 1.25
PTP4A3-203ENST00000520105 C9orf50Q5SZB4 431 aa22.87■■□□□ 1.25
PTP4A3-203ENST00000520105 HERC6Q8IVU3 1022 aa22.87■■□□□ 1.25
PTP4A3-203ENST00000520105 RRAGDQ9NQL2 400 aaPredicted RBP22.87■■□□□ 1.25
PTP4A3-203ENST00000520105 TRMT1Q9NXH9 659 aaKnown RBP22.87■■□□□ 1.25
PTP4A3-203ENST00000520105 DDX43Q9NXZ2 648 aaKnown RBP22.87■■□□□ 1.25
PTP4A3-203ENST00000520105 NAGPAQ9UK23 515 aa22.87■■□□□ 1.25
PTP4A3-203ENST00000520105 RANBP2P49792 3224 aaKnown RBP22.86■■□□□ 1.25
PTP4A3-203ENST00000520105 A0A0U1RQJ8 604 aa22.86■■□□□ 1.25
PTP4A3-203ENST00000520105 TMCO5BA8MYB1 307 aa22.86■■□□□ 1.25
PTP4A3-203ENST00000520105 CYP11A1P05108 521 aa22.86■■□□□ 1.25
PTP4A3-203ENST00000520105 ATP2A2P16615 1042 aaKnown RBP22.86■■□□□ 1.25
PTP4A3-203ENST00000520105 SPA17Q15506 151 aa22.86■■□□□ 1.25
PTP4A3-203ENST00000520105 SMYD5Q6GMV2 418 aa22.86■■□□□ 1.25
PTP4A3-203ENST00000520105 ZNF677Q86XU0 584 aa22.86■■□□□ 1.25
PTP4A3-203ENST00000520105 ATRIPQ8WXE1 791 aa22.86■■□□□ 1.25
PTP4A3-203ENST00000520105 TAS2R14Q9NYV8 317 aa22.86■■□□□ 1.25
PTP4A3-203ENST00000520105 TFR2Q9UP52 801 aa22.86■■□□□ 1.25
PTP4A3-203ENST00000520105 PPP2R2CQ9Y2T4 447 aa22.86■■□□□ 1.25
PTP4A3-203ENST00000520105 USP27XA6NNY8 438 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 TRAPPC3O43617 180 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 ATP2C2O75185 946 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 ANXA13P27216 316 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 TKTP29401 623 aaKnown RBP22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 LHX1P48742 406 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 CCDC122Q5T0U0 273 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 ALKBH5Q6P6C2 394 aaKnown RBP22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 KCNT2Q6UVM3 1135 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 CRYBG2Q8N1P7 616 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 SLC9A7Q96T83 725 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 PDCL3Q9H2J4 239 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 PCDHB8Q9UN66 801 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 IPO7O95373 1038 aaKnown RBP22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 CCDC175P0C221 793 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 VDRP11473 427 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 CDR1P51861 262 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 PSMC1P62191 440 aaKnown RBP22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 RASIP1Q5U651 963 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 FAM171A1Q5VUB5 890 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 KIAA0319Q5VV43 1072 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 METTL23Q86XA0 190 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 PASD1Q8IV76 773 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 RTP3Q9BQQ7 232 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 FAM49BQ9NUQ9 324 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 DSEQ9UL01 958 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 INSL6Q9Y581 213 aa22.85■■□□□ 1.25
PTP4A3-203ENST00000520105 CCDC142Q17RM4 750 aa22.84■■□□□ 1.25
PTP4A3-203ENST00000520105 FUT10Q6P4F1 479 aa22.84■■□□□ 1.25
PTP4A3-203ENST00000520105 CEP57Q86XR8 500 aa22.84■■□□□ 1.25
PTP4A3-203ENST00000520105 PHOSPHO2Q8TCD6 241 aa22.84■■□□□ 1.25
PTP4A3-203ENST00000520105 CYFIP2Q96F07 1278 aa22.84■■□□□ 1.25
PTP4A3-203ENST00000520105 B3GALT6Q96L58 329 aa22.84■■□□□ 1.25
PTP4A3-203ENST00000520105 MTIF3Q9H2K0 278 aaKnown RBP22.84■■□□□ 1.25
PTP4A3-203ENST00000520105 NENFQ9UMX5 172 aa22.84■■□□□ 1.25
PTP4A3-203ENST00000520105 PCDHA13Q9Y5I0 950 aa22.84■■□□□ 1.25
PTP4A3-203ENST00000520105 TYMPP19971 482 aa22.83■■□□□ 1.25
PTP4A3-203ENST00000520105 KRT83P78385 493 aa22.83■■□□□ 1.25
PTP4A3-203ENST00000520105 SHHQ15465 462 aa22.83■■□□□ 1.25
PTP4A3-203ENST00000520105 SGO2Q562F6 1265 aa22.83■■□□□ 1.25
PTP4A3-203ENST00000520105 OVOS1Q6IE37 1185 aa22.83■■□□□ 1.25
PTP4A3-203ENST00000520105 TAS1R1Q7RTX1 841 aa22.83■■□□□ 1.25
PTP4A3-203ENST00000520105 CCAR2Q8N163 923 aaKnown RBP22.83■■□□□ 1.25
PTP4A3-203ENST00000520105 IGSF21Q96ID5 467 aa22.83■■□□□ 1.25
PTP4A3-203ENST00000520105 ZNF558Q96NG5 402 aa22.83■■□□□ 1.25
PTP4A3-203ENST00000520105 RAD9AQ99638 391 aa22.83■■□□□ 1.25
PTP4A3-203ENST00000520105 KIAA1257Q9ULG3 409 aa22.83■■□□□ 1.25
PTP4A3-203ENST00000520105 VWA8A3KMH1 1905 aa22.83■■□□□ 1.25
PTP4A3-203ENST00000520105 SF3B1O75533 1304 aaKnown RBP eCLIP22.83■■□□□ 1.251e-6■■■■■ 57.8
PTP4A3-203ENST00000520105 TLL1O43897 1013 aa22.83■■□□□ 1.24
PTP4A3-203ENST00000520105 MAGEA1P43355 309 aa22.83■■□□□ 1.24
PTP4A3-203ENST00000520105 PPP1R26Q5T8A7 1209 aaPredicted RBP22.83■■□□□ 1.24
PTP4A3-203ENST00000520105 B3GALNT2Q8NCR0 500 aa22.83■■□□□ 1.24
PTP4A3-203ENST00000520105 TNIP3Q96KP6 325 aa22.83■■□□□ 1.24
PTP4A3-203ENST00000520105 PACSIN1Q9BY11 444 aa22.83■■□□□ 1.24
PTP4A3-203ENST00000520105 TSC2P49815 1807 aa22.82■■□□□ 1.24
PTP4A3-203ENST00000520105 ARHGEF37A1IGU5 675 aa22.82■■□□□ 1.24
PTP4A3-203ENST00000520105 RCCD1A6NED2 376 aa22.82■■□□□ 1.24
PTP4A3-203ENST00000520105 O00370 1275 aa22.82■■□□□ 1.24
PTP4A3-203ENST00000520105 PTPN1P18031 435 aaKnown RBP22.82■■□□□ 1.24
PTP4A3-203ENST00000520105 MSNP26038 577 aaKnown RBP22.82■■□□□ 1.24
PTP4A3-203ENST00000520105 YWHAHQ04917 246 aaPredicted RBP22.82■■□□□ 1.24
PTP4A3-203ENST00000520105 FIBCD1Q8N539 461 aa22.82■■□□□ 1.24
PTP4A3-203ENST00000520105 COLGALT1Q8NBJ5 622 aa22.82■■□□□ 1.24
PTP4A3-203ENST00000520105 LCHNA4D1U4 455 aa22.81■■□□□ 1.24
PTP4A3-203ENST00000520105 MED7O43513 233 aa22.81■■□□□ 1.24
PTP4A3-203ENST00000520105 ABL1P00519 1130 aa22.81■■□□□ 1.24
PTP4A3-203ENST00000520105 CYP1A1P04798 512 aaPredicted RBP22.81■■□□□ 1.24
PTP4A3-203ENST00000520105 LAG3P18627 525 aa22.81■■□□□ 1.24
PTP4A3-203ENST00000520105 RABGGTBP53611 331 aa22.81■■□□□ 1.24
PTP4A3-203ENST00000520105 CNGA2Q16280 664 aa22.81■■□□□ 1.24
PTP4A3-203ENST00000520105 CLEC16AQ2KHT3 1053 aa22.81■■□□□ 1.24
PTP4A3-203ENST00000520105 DENND1BQ6P3S1 775 aa22.81■■□□□ 1.24
PTP4A3-203ENST00000520105 REXO1L1PQ8IX06 675 aa22.81■■□□□ 1.24
PTP4A3-203ENST00000520105 CPA5Q8WXQ8 436 aa22.81■■□□□ 1.24
PTP4A3-203ENST00000520105 SYT15Q9BQS2 421 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms