RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 EZH1Q92800 747 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-206ENST00000520002 ABHD8Q96I13 439 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 FHDC1Q9C0D6 1143 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-206ENST00000520002 RAVER2Q9HCJ3 691 aaKnown RBP9.07□□□□□ -0.96
CSMD1-206ENST00000520002 SMG5Q9UPR3 1016 aaKnown RBP9.07□□□□□ -0.96
CSMD1-206ENST00000520002 KLHL41O60662 606 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 IMPDH2P12268 514 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 SLC9A1P19634 815 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 CRKP46108 304 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 ATAD3BQ5T9A4 648 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 SUSD4Q5VX71 490 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 ELMOD1Q8N336 334 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 RFFLQ8WZ73 363 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 SH3KBP1Q96B97 665 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 ZNF446Q9NWS9 450 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 WDR19Q8NEZ3 1342 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 BFSP2Q13515 415 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 DDI2Q5TDH0 399 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 RBBP8NLQ8NC74 664 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-206ENST00000520002 PACSIN1Q9BY11 444 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 KIAA1586Q9HCI6 787 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 ARHGEF3Q9NR81 526 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 SELENONQ9NZV5 590 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 UTYO14607 1347 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 CASZ1Q86V15 1759 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.07□□□□□ -0.96
CSMD1-206ENST00000520002 UBA6A0AVT1 1052 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-206ENST00000520002 MOCS2O96007 188 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-206ENST00000520002 CACNB2Q08289 660 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-206ENST00000520002 CDKL3Q8IVW4 592 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-206ENST00000520002 ANKZF1Q9H8Y5 726 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 FAM217BQ9NTX9 383 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-206ENST00000520002 RBAKQ9NYW8 714 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-206ENST00000520002 RABGEF1Q9UJ41 708 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 KCNN4O15554 427 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 PHF2O75151 1096 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 RAG1P15918 1043 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 TRAF2Q12933 501 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 ZNF618Q5T7W0 954 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 PPP1R18Q6NYC8 613 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 AGAP11Q8TF27 550 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 BARHL2Q9NY43 387 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 ROBO2Q9HCK4 1378 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 FAM58BPP0C7Q3 252 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 PTK7Q13308 1070 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 ZBTB46Q86UZ6 589 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 HPS3Q969F9 1004 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 EML4Q9HC35 981 aaKnown RBP9.07□□□□□ -0.96
CSMD1-206ENST00000520002 CLIC5Q9NZA1 410 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 TELO2Q9Y4R8 837 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 NCAPD2Q15021 1401 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 MYO1DO94832 1006 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 KLHL2O95198 593 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 CCDC130P13994 396 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 SERPINB5P36952 375 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 TRIP4Q15650 581 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-206ENST00000520002 STX19Q8N4C7 294 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 RBM15Q96T37 977 aaKnown RBP eCLIP9.07□□□□□ -0.96
CSMD1-206ENST00000520002 COA1Q9GZY4 146 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 TMBIM4Q9HC24 238 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 CACNA2D2Q9NY47 1150 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 PRELID1Q9Y255 219 aa9.07□□□□□ -0.96
CSMD1-206ENST00000520002 ADGRA3Q8IWK6 1321 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 NEK10Q6ZWH5 1172 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 MB21D2Q8IYB1 491 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-206ENST00000520002 EIF2AK1Q9BQI3 630 aaKnown RBP9.06□□□□□ -0.96
CSMD1-206ENST00000520002 PHTF1Q9UMS5 762 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 SNAP23O00161 211 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 CYTH3O43739 400 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 LRRC49Q8IUZ0 686 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 TINF2Q9BSI4 451 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 ROGDIQ9GZN7 287 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 GPBP1L1Q9HC44 474 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-206ENST00000520002 ARHGEF38Q9NXL2 777 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 CORO1CQ9ULV4 474 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-206ENST00000520002 TCHHL1Q5QJ38 904 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-206ENST00000520002 IL31Q6EBC2 164 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 SYNE4Q8N205 404 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 TCAIMQ8N3R3 496 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 SPATA33Q96N06 139 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 MMP10P09238 476 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 EIF3EP60228 445 aaKnown RBP9.06□□□□□ -0.96
CSMD1-206ENST00000520002 IRGCQ6NXR0 463 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 JAMLQ86YT9 394 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 DCP1AQ9NPI6 582 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-206ENST00000520002 ERBB3P21860 1342 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 ADCY6O43306 1168 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 APRTP07741 180 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 EGFL6Q8IUX8 553 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 KBTBD2Q8IY47 623 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 MRPL4Q9BYD3 311 aaKnown RBP9.06□□□□□ -0.96
CSMD1-206ENST00000520002 QTRT2Q9H974 415 aaKnown RBP9.06□□□□□ -0.96
CSMD1-206ENST00000520002 ZC3H7BQ9UGR2 993 aaKnown RBP9.06□□□□□ -0.96
CSMD1-206ENST00000520002 MAD2L2Q9UI95 211 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 PRG3Q9Y2Y8 225 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-206ENST00000520002 PRDX5P30044 214 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 QARSP47897 775 aaKnown RBP9.06□□□□□ -0.96
CSMD1-206ENST00000520002 SGSM1Q2NKQ1 1148 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 COBLL1Q53SF7 1204 aa9.06□□□□□ -0.96
CSMD1-206ENST00000520002 TRIM72Q6ZMU5 477 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms