RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 KIF12Q96FN5 646 aa9.14□□□□□ -0.95
CTNNA1-215ENST00000519309 GCNAQ96QF7 691 aa9.14□□□□□ -0.95
CTNNA1-215ENST00000519309 P2RY13Q9BPV8 354 aa9.14□□□□□ -0.95
CTNNA1-215ENST00000519309 LARP6Q9BRS8 491 aaKnown RBP9.14□□□□□ -0.95
CTNNA1-215ENST00000519309 SLC46A2Q9BY10 475 aa9.14□□□□□ -0.95
CTNNA1-215ENST00000519309 TMEM60Q9H2L4 133 aa9.14□□□□□ -0.95
CTNNA1-215ENST00000519309 EBF3Q9H4W6 596 aa9.14□□□□□ -0.95
CTNNA1-215ENST00000519309 SLC32A1Q9H598 525 aa9.14□□□□□ -0.95
CTNNA1-215ENST00000519309 BRMS1Q9HCU9 246 aa9.14□□□□□ -0.95
CTNNA1-215ENST00000519309 GKN1Q9NS71 199 aa9.14□□□□□ -0.95
CTNNA1-215ENST00000519309 PTPRBP23467 1997 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 ARSAP15289 507 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 CYP3A5P20815 502 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 BCKDHBP21953 392 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 GJA4P35212 333 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 HOXD12P35452 270 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 DPP6P42658 865 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 NPTX2P47972 431 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 IRX4P78413 519 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 USP4Q13107 963 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 STK3Q13188 491 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 SEMA3BQ13214 749 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 NOLC1Q14978 699 aaKnown RBP eCLIP9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 VEPH1Q14D04 833 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 PDGFRLQ15198 375 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 SLC10A6Q3KNW5 377 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 USP39Q53GS9 565 aaKnown RBP9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 HAUS3Q68CZ6 603 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 NAIF1Q69YI7 327 aaPredicted RBP9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 TRIM68Q6AZZ1 485 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 OVOS1Q6IE37 1185 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 RAB44Q7Z6P3 723 aaPredicted RBP9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 USP37Q86T82 979 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 TMEM150AQ86TG1 271 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 PDZD3Q86UT5 571 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 GPIHBP1Q8IV16 184 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 DAW1Q8N136 415 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 TSTD1Q8NFU3 115 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 OLIG1Q8TAK6 271 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 ERMNQ8TAM6 284 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 WASF1Q92558 559 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 USP13Q92995 863 aaPredicted RBP9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 LPIN3Q9BQK8 851 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 TARS2Q9BW92 718 aaKnown RBP9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 TM6SF1Q9BZW5 370 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 SMG9Q9H0W8 520 aaKnown RBP9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 FBRSL1Q9HCM7 1045 aaKnown RBP9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 CCL26Q9Y258 94 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 CYP46A1Q9Y6A2 500 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 NAV2Q8IVL1 2488 aa9.13□□□□□ -0.95
CTNNA1-215ENST00000519309 KALRNO60229 2985 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 CFAP46Q8IYW2 2715 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 TTC26A0AVF1 554 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 TNFRSF10BO14763 440 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 TOM1L1O75674 476 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 SOAT2O75908 522 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 REC8O95072 547 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 NEFLP07196 543 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 CHRM1P11229 460 aaPredicted RBP9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 ODC1P11926 461 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 AVPR1AP37288 418 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 TUFMP49411 452 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 DGKEP52429 567 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 SIM1P81133 766 aaPredicted RBP9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 BFSP1Q12934 665 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 DMP1Q13316 513 aaPredicted RBP9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 ORC2Q13416 577 aaPredicted RBP9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 ZBTB6Q15916 424 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 ZNF423Q2M1K9 1284 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 UAP1L1Q3KQV9 507 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 TRIM61Q5EBN2 209 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 SLC23A3Q6PIS1 610 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 CPA6Q8N4T0 437 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 MDGA1Q8NFP4 955 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 OR10T2Q8NGX3 314 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 CCDC26Q8TAB7 109 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 C2orf15Q8WU43 125 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 CD101Q93033 1021 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 TPSD1Q9BZJ3 242 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 BHMT2Q9H2M3 363 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 ECT2Q9H8V3 914 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 C17orf75Q9HAS0 396 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 PLEKHA5Q9HAU0 1116 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 TDP1Q9NUW8 608 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 PPP4R2Q9NY27 417 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 UBQLN1Q9UMX0 589 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 SLC27A5Q9Y2P5 690 aa9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 TIMM13Q9Y5L4 95 aaPredicted RBP9.12□□□□□ -0.95
CTNNA1-215ENST00000519309 SPAARA0A1B0GVQ0 90 aa9.11□□□□□ -0.95
CTNNA1-215ENST00000519309 PFKFB2O60825 505 aa9.11□□□□□ -0.95
CTNNA1-215ENST00000519309 TADA3O75528 432 aa9.11□□□□□ -0.95
CTNNA1-215ENST00000519309 CTDNEP1O95476 244 aa9.11□□□□□ -0.95
CTNNA1-215ENST00000519309 CYP11A1P05108 521 aa9.11□□□□□ -0.95
CTNNA1-215ENST00000519309 CXCL8P10145 99 aa9.11□□□□□ -0.95
CTNNA1-215ENST00000519309 HMGA1P17096 107 aaKnown RBP9.11□□□□□ -0.95
CTNNA1-215ENST00000519309 ENGP17813 658 aa9.11□□□□□ -0.95
CTNNA1-215ENST00000519309 PAX3P23760 479 aa9.11□□□□□ -0.95
CTNNA1-215ENST00000519309 P2RY2P41231 377 aa9.11□□□□□ -0.95
CTNNA1-215ENST00000519309 GALK1P51570 392 aa9.11□□□□□ -0.95
CTNNA1-215ENST00000519309 PEX3P56589 373 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms