RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 TWNKQ96RR1 684 aa15.99■□□□□ 0.15
TRAPPC9-205ENST00000518839 MRPL45Q9BRJ2 306 aaKnown RBP15.99■□□□□ 0.15
TRAPPC9-205ENST00000518839 C11orf70Q9BRQ4 267 aa15.99■□□□□ 0.15
TRAPPC9-205ENST00000518839 ELAC1Q9H777 363 aaKnown RBP15.99■□□□□ 0.15
TRAPPC9-205ENST00000518839 GOLGA2P5Q9HBQ8 144 aa15.99■□□□□ 0.15
TRAPPC9-205ENST00000518839 KANSL3Q9P2N6 904 aa15.99■□□□□ 0.15
TRAPPC9-205ENST00000518839 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.99■□□□□ 0.15
TRAPPC9-205ENST00000518839 CTAGE15A4D2H0 777 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 A8MXQ7 604 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 MIF4GDA9UHW6 222 aaKnown RBP15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 O00370 1275 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 CTAGE8P0CG41 777 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 SETSIPP0DME0 302 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 GNL1P36915 607 aaPredicted RBP15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 PAFAH1B1P43034 410 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 SNX16P57768 344 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 ARHGAP17Q68EM7 881 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 LCLAT1Q6UWP7 414 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 CTAGE6Q86UF2 777 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 NT5DC3Q86UY8 548 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 ERICH1Q86X53 443 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 CTAGE4Q8IX94 777 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 ADGRF2Q8IZF7 708 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 CRYBG2Q8N1P7 616 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 C1orf131Q8NDD1 294 aaKnown RBP15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 TNIP3Q96KP6 325 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 ZSWIM1Q9BR11 485 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 SELENOOQ9BVL4 669 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 RNF19AQ9NV58 838 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 PARVAQ9NVD7 372 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 TMEM161AQ9NX61 479 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 MIOSQ9NXC5 875 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 WDR35Q9P2L0 1181 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 HMGXB4Q9UGU5 601 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 COG5Q9UP83 839 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 STXBP5LQ9Y2K9 1186 aa15.98■□□□□ 0.15
TRAPPC9-205ENST00000518839 CYB561D2O14569 222 aa15.97■□□□□ 0.15
TRAPPC9-205ENST00000518839 SPTLC1O15269 473 aa15.97■□□□□ 0.15
TRAPPC9-205ENST00000518839 TADA3O75528 432 aa15.97■□□□□ 0.15
TRAPPC9-205ENST00000518839 MICAL2O94851 1124 aa15.97■□□□□ 0.15
TRAPPC9-205ENST00000518839 CFHP08603 1231 aa15.97■□□□□ 0.15
TRAPPC9-205ENST00000518839 RRM1P23921 792 aa15.97■□□□□ 0.15
TRAPPC9-205ENST00000518839 GSCP56915 257 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC9-205ENST00000518839 PTP4A2Q12974 167 aa15.97■□□□□ 0.15
TRAPPC9-205ENST00000518839 CCDC181Q5TID7 509 aa15.97■□□□□ 0.15
TRAPPC9-205ENST00000518839 PLEKHA7Q6IQ23 1121 aa15.97■□□□□ 0.15
TRAPPC9-205ENST00000518839 DENND1BQ6P3S1 775 aa15.97■□□□□ 0.15
TRAPPC9-205ENST00000518839 MMS22LQ6ZRQ5 1243 aa15.97■□□□□ 0.15
TRAPPC9-205ENST00000518839 GOLGA1Q92805 767 aa15.97■□□□□ 0.15
TRAPPC9-205ENST00000518839 HIPK3Q9H422 1215 aa15.97■□□□□ 0.15
TRAPPC9-205ENST00000518839 HESX1Q9UBX0 185 aa15.97■□□□□ 0.15
TRAPPC9-205ENST00000518839 L1RE1Q9UN81 338 aa15.97■□□□□ 0.15
TRAPPC9-205ENST00000518839 M0QYV0 167 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 ATMINO43313 823 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 HOXA2O43364 376 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 NCK2O43639 380 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 NBNO60934 754 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 SLC1A1P43005 524 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 GJA8P48165 433 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 LHX1P48742 406 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 AARSP49588 968 aaKnown RBP eCLIP15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 CTCFP49711 727 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 MNX1P50219 401 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 ITIH3Q06033 890 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 CLUL1Q15846 466 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 UPP1Q16831 310 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 CFAP221Q4G0U5 840 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 DSTYKQ6XUX3 929 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 ZNF572Q7Z3I7 529 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 RTN4RL1Q86UN2 441 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 UBL4BQ8N7F7 174 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 IPO4Q8TEX9 1081 aaKnown RBP15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 KBTBD7Q8WVZ9 684 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 LINC01599Q8WXQ3 324 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 UBXN4Q92575 508 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 HES6Q96HZ4 224 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 SENP8Q96LD8 212 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 WNT8AQ9H1J5 351 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 ANAPC7Q9UJX3 599 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 TSPAN16Q9UKR8 245 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 ALG6Q9Y672 507 aa15.96■□□□□ 0.15
TRAPPC9-205ENST00000518839 MYO1FO00160 1098 aa15.95■□□□□ 0.14
TRAPPC9-205ENST00000518839 SRGAP2O75044 1071 aa15.95■□□□□ 0.14
TRAPPC9-205ENST00000518839 POMCP01189 267 aa15.95■□□□□ 0.14
TRAPPC9-205ENST00000518839 CXCL10P02778 98 aa15.95■□□□□ 0.14
TRAPPC9-205ENST00000518839 ODC1P11926 461 aa15.95■□□□□ 0.14
TRAPPC9-205ENST00000518839 SSTR3P32745 418 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC9-205ENST00000518839 CLCNKBP51801 687 aa15.95■□□□□ 0.14
TRAPPC9-205ENST00000518839 ATN1P54259 1190 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC9-205ENST00000518839 ORC1Q13415 861 aa15.95■□□□□ 0.14
TRAPPC9-205ENST00000518839 ZNF268Q14587 947 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC9-205ENST00000518839 MESDQ14696 234 aa15.95■□□□□ 0.14
TRAPPC9-205ENST00000518839 NOMO2Q5JPE7 1267 aa15.95■□□□□ 0.14
TRAPPC9-205ENST00000518839 DNAJC24Q6P3W2 148 aa15.95■□□□□ 0.14
TRAPPC9-205ENST00000518839 DCLRE1AQ6PJP8 1040 aa15.95■□□□□ 0.14
TRAPPC9-205ENST00000518839 ACOT1Q86TX2 421 aa15.95■□□□□ 0.14
TRAPPC9-205ENST00000518839 PDCL2Q8N4E4 241 aa15.95■□□□□ 0.14
TRAPPC9-205ENST00000518839 WDTC1Q8N5D0 677 aa15.95■□□□□ 0.14
TRAPPC9-205ENST00000518839 DBF4BQ8NFT6 615 aa15.95■□□□□ 0.14
TRAPPC9-205ENST00000518839 FEZF2Q8TBJ5 459 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms