RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 THEM5Q8N1Q8 247 aa14.29□□□□□ -0.12
VEGFA-219ENST00000518824 GPR152Q8TDT2 470 aa14.29□□□□□ -0.12
VEGFA-219ENST00000518824 ZSWIM3Q96MP5 696 aa14.29□□□□□ -0.12
VEGFA-219ENST00000518824 OXCT2Q9BYC2 517 aaPredicted RBP14.29□□□□□ -0.12
VEGFA-219ENST00000518824 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.29□□□□□ -0.121e-6■■□□□ 14
VEGFA-219ENST00000518824 ABI2Q9NYB9 513 aaPredicted RBP14.29□□□□□ -0.12
VEGFA-219ENST00000518824 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.29□□□□□ -0.124e-7■■■■■ 28.5
VEGFA-219ENST00000518824 GTF3C4Q9UKN8 822 aa14.29□□□□□ -0.12
VEGFA-219ENST00000518824 MRPS23Q9Y3D9 190 aaKnown RBP14.29□□□□□ -0.12
VEGFA-219ENST00000518824 NUMBLQ9Y6R0 609 aa14.29□□□□□ -0.12
VEGFA-219ENST00000518824 MYBPHLA2RUH7 354 aa14.28□□□□□ -0.12
VEGFA-219ENST00000518824 PRR33A8MZF0 331 aa14.28□□□□□ -0.12
VEGFA-219ENST00000518824 ANHXE9PGG2 379 aa14.28□□□□□ -0.12
VEGFA-219ENST00000518824 PDGFRBP09619 1106 aa14.28□□□□□ -0.12
VEGFA-219ENST00000518824 MYL4P12829 197 aa14.28□□□□□ -0.12
VEGFA-219ENST00000518824 RAP1GAPP47736 663 aa14.28□□□□□ -0.12
VEGFA-219ENST00000518824 PSMC1P62191 440 aaKnown RBP14.28□□□□□ -0.12
VEGFA-219ENST00000518824 SIGLEC14Q08ET2 396 aa14.28□□□□□ -0.12
VEGFA-219ENST00000518824 MTMR3Q13615 1198 aa14.28□□□□□ -0.12
VEGFA-219ENST00000518824 NFIL3Q16649 462 aa14.28□□□□□ -0.12
VEGFA-219ENST00000518824 INTS6LQ5JSJ4 861 aaKnown RBP14.28□□□□□ -0.12
VEGFA-219ENST00000518824 ZNF658Q5TYW1 1059 aaPredicted RBP14.28□□□□□ -0.12
VEGFA-219ENST00000518824 SLC44A3Q8N4M1 653 aa14.28□□□□□ -0.12
VEGFA-219ENST00000518824 TOP6BLQ8N6T0 577 aa14.28□□□□□ -0.12
VEGFA-219ENST00000518824 GIPC2Q8TF65 315 aa14.28□□□□□ -0.12
VEGFA-219ENST00000518824 SMARCE1Q969G3 411 aa14.28□□□□□ -0.12
VEGFA-219ENST00000518824 GSDMAQ96QA5 445 aa14.28□□□□□ -0.12
VEGFA-219ENST00000518824 SEPT5Q99719 369 aaPredicted RBP14.28□□□□□ -0.12
VEGFA-219ENST00000518824 PI4K2AQ9BTU6 479 aa14.28□□□□□ -0.12
VEGFA-219ENST00000518824 PLA2G2FQ9BZM2 168 aa14.28□□□□□ -0.12
VEGFA-219ENST00000518824 SDCBP2Q9H190 292 aa14.28□□□□□ -0.12
VEGFA-219ENST00000518824 CRTAC1Q9NQ79 661 aa14.28□□□□□ -0.12
VEGFA-219ENST00000518824 NCANO14594 1321 aa14.27□□□□□ -0.12
VEGFA-219ENST00000518824 BIN1O00499 593 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 PRPF40AO75400 957 aaKnown RBP14.27□□□□□ -0.13
VEGFA-219ENST00000518824 HAPLN1P10915 354 aaPredicted RBP14.27□□□□□ -0.13
VEGFA-219ENST00000518824 CYP2F1P24903 491 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 EPHA5P54756 1037 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 CDH8P55286 799 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 PPP3CAQ08209 521 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 MYO1EQ12965 1108 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 ADAM9Q13443 819 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 BIRC3Q13489 604 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 TDGQ13569 410 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 WDR72Q3MJ13 1102 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 MGAT5BQ3V5L5 792 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 STXBP5Q5T5C0 1151 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 ANKRD40Q6AI12 368 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 SPOPLQ6IQ16 392 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 SV2AQ7L0J3 742 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 DNAJB7Q7Z6W7 309 aaPredicted RBP14.27□□□□□ -0.13
VEGFA-219ENST00000518824 GPIHBP1Q8IV16 184 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 TMEM86AQ8N2M4 240 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 SHKBP1Q8TBC3 707 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 TMC2Q8TDI7 906 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 ZNF512Q96ME7 567 aaPredicted RBP14.27□□□□□ -0.13
VEGFA-219ENST00000518824 MMS19Q96T76 1030 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 KXD1Q9BQD3 176 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 ACBD6Q9BR61 282 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 DPEP3Q9H4B8 488 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 SMYD3Q9H7B4 428 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 AVENQ9NQS1 362 aaPredicted RBP14.27□□□□□ -0.13
VEGFA-219ENST00000518824 NXF1Q9UBU9 619 aaKnown RBP14.27□□□□□ -0.13
VEGFA-219ENST00000518824 MAFFQ9ULX9 164 aa14.27□□□□□ -0.13
VEGFA-219ENST00000518824 PTPRDP23468 1912 aa14.26□□□□□ -0.13
VEGFA-219ENST00000518824 KINO60870 393 aaKnown RBP14.26□□□□□ -0.13
VEGFA-219ENST00000518824 PHACTR2O75167 634 aa14.26□□□□□ -0.13
VEGFA-219ENST00000518824 WARSP23381 471 aaKnown RBP14.26□□□□□ -0.13
VEGFA-219ENST00000518824 FCARP24071 287 aa14.26□□□□□ -0.13
VEGFA-219ENST00000518824 GCLMP48507 274 aa14.26□□□□□ -0.13
VEGFA-219ENST00000518824 VAMP7P51809 220 aa14.26□□□□□ -0.13
VEGFA-219ENST00000518824 TRPC3Q13507 836 aa14.26□□□□□ -0.13
VEGFA-219ENST00000518824 NCOA4Q13772 614 aa14.26□□□□□ -0.13
VEGFA-219ENST00000518824 TEAD2Q15562 447 aa14.26□□□□□ -0.13
VEGFA-219ENST00000518824 ZACNQ401N2 412 aa14.26□□□□□ -0.13
VEGFA-219ENST00000518824 SCARA5Q6ZMJ2 495 aa14.26□□□□□ -0.13
VEGFA-219ENST00000518824 GAREM2Q75VX8 874 aa14.26□□□□□ -0.13
VEGFA-219ENST00000518824 PDZD4Q76G19 769 aaPredicted RBP14.26□□□□□ -0.13
VEGFA-219ENST00000518824 FAM186BQ8IYM0 893 aa14.26□□□□□ -0.13
VEGFA-219ENST00000518824 ADSSL1Q8N142 457 aa14.26□□□□□ -0.13
VEGFA-219ENST00000518824 PBXIP1Q96AQ6 731 aa14.26□□□□□ -0.13
VEGFA-219ENST00000518824 SYT15Q9BQS2 421 aa14.26□□□□□ -0.13
VEGFA-219ENST00000518824 MMRN2Q9H8L6 949 aa14.26□□□□□ -0.13
VEGFA-219ENST00000518824 RMND1Q9NWS8 449 aa14.26□□□□□ -0.13
VEGFA-219ENST00000518824 IGSF9Q9P2J2 1179 aa14.26□□□□□ -0.13
VEGFA-219ENST00000518824 DUSP12Q9UNI6 340 aa14.26□□□□□ -0.13
VEGFA-219ENST00000518824 FRMD4BQ9Y2L6 1034 aa14.26□□□□□ -0.13
VEGFA-219ENST00000518824 KMT2EQ8IZD2 1858 aa14.25□□□□□ -0.13
VEGFA-219ENST00000518824 A0A1W2PRU2 124 aa14.25□□□□□ -0.13
VEGFA-219ENST00000518824 PPP1R3GB7ZBB8 358 aa14.25□□□□□ -0.13
VEGFA-219ENST00000518824 KIF20AO95235 890 aa14.25□□□□□ -0.13
VEGFA-219ENST00000518824 SMC2O95347 1197 aa14.25□□□□□ -0.13
VEGFA-219ENST00000518824 HLA-DRAP01903 254 aa14.25□□□□□ -0.13
VEGFA-219ENST00000518824 CFHP08603 1231 aa14.25□□□□□ -0.13
VEGFA-219ENST00000518824 ALDH1A3P47895 512 aa14.25□□□□□ -0.13
VEGFA-219ENST00000518824 LHX1P48742 406 aa14.25□□□□□ -0.13
VEGFA-219ENST00000518824 EPHB3P54753 998 aa14.25□□□□□ -0.13
VEGFA-219ENST00000518824 VCPP55072 806 aaKnown RBP14.25□□□□□ -0.13
VEGFA-219ENST00000518824 MYL7Q01449 175 aa14.25□□□□□ -0.13
VEGFA-219ENST00000518824 TSPY1Q01534 308 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms