RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 MYO7AQ13402 2215 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 CCDC171Q6TFL3 1326 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 RIF1Q5UIP0 2472 aaKnown RBP7.06□□□□□ -1.28
CCDC6-203ENST00000518638 ZFHX2Q9C0A1 2572 aaPredicted RBP7.06□□□□□ -1.28
CCDC6-203ENST00000518638 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.06□□□□□ -1.28
CCDC6-203ENST00000518638 PRDM1O75626 825 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 ARIH2O95376 493 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 LMNAP02545 664 aaKnown RBP7.06□□□□□ -1.28
CCDC6-203ENST00000518638 ZNF286BP0CG31 522 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 FGFR1P11362 822 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 HOXB8P17481 243 aaPredicted RBP7.06□□□□□ -1.28
CCDC6-203ENST00000518638 ARL4AP40617 200 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 NRIP1P48552 1158 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 RBM10P98175 930 aaKnown RBP7.06□□□□□ -1.28
CCDC6-203ENST00000518638 TFAP4Q01664 338 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 MVKQ03426 396 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 MAP4K2Q12851 820 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 IFRD2Q12894 506 aaPredicted RBP7.06□□□□□ -1.28
CCDC6-203ENST00000518638 BMS1Q14692 1282 aaKnown RBP7.06□□□□□ -1.28
CCDC6-203ENST00000518638 TESK1Q15569 626 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 LY6KQ17RY6 165 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 ACBD5Q5T8D3 534 aaPredicted RBP7.06□□□□□ -1.28
CCDC6-203ENST00000518638 CEP85Q6P2H3 762 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 SEPT14Q6ZU15 432 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 CPNE8Q86YQ8 564 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 TMEM105Q8N8V8 129 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 TMEM145Q8NBT3 493 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 CLEC4DQ8WXI8 215 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 KCTD13Q8WZ19 329 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 RMDN1Q96DB5 314 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 NECTIN4Q96NY8 510 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 RTP3Q9BQQ7 232 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 BRINP2Q9C0B6 783 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 BARX2Q9UMQ3 279 aaPredicted RBP7.06□□□□□ -1.28
CCDC6-203ENST00000518638 C5orf42Q9H799 3197 aa7.06□□□□□ -1.28
CCDC6-203ENST00000518638 TRAV20A0A0B4J274 112 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 A0A1W2PQ27 194 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 A0A1W2PQ64 194 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 A0A1W2PQC6 194 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 A0A1W2PQD8 194 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 ZC3H12DA2A288 527 aaKnown RBP7.05□□□□□ -1.28
CCDC6-203ENST00000518638 GPAA1O43292 621 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 EIF3JO75822 258 aaKnown RBP7.05□□□□□ -1.28
CCDC6-203ENST00000518638 KRT37O76014 449 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 GLP2RO95838 553 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 LINC00271P0C7V0 271 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 MSL3P1P0C860 447 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 STAG3L1P0CL83 205 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 TGFB3P10600 412 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 HSD3B2P26439 372 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 HOXC8P31273 242 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 ERVFRD-1P60508 538 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 SNAP25P60880 206 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 CYP4F8P98187 520 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 SSRP1Q08945 709 aaKnown RBP7.05□□□□□ -1.28
CCDC6-203ENST00000518638 PRSS53Q2L4Q9 553 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 SLC35F1Q5T1Q4 408 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 MBLAC2Q68D91 279 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 IQCEQ6IPM2 695 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 TMEM184AQ6ZMB5 413 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 RSPH3Q86UC2 560 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 KCNG4Q8TDN1 519 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 POF1BQ8WVV4 589 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 ZNF689Q96CS4 500 aaPredicted RBP7.05□□□□□ -1.28
CCDC6-203ENST00000518638 IER2Q9BTL4 223 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 FTHL17Q9BXU8 183 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 NAPBQ9H115 298 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 TLE6Q9H808 572 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 EPB41L4AQ9HCS5 686 aaPredicted RBP7.05□□□□□ -1.28
CCDC6-203ENST00000518638 TNFRSF12AQ9NP84 129 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 PFDN2Q9UHV9 154 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 ZNF215Q9UL58 517 aaPredicted RBP7.05□□□□□ -1.28
CCDC6-203ENST00000518638 MYH7BA7E2Y1 1941 aa7.05□□□□□ -1.28
CCDC6-203ENST00000518638 ABCB11O95342 1321 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 C7orf72A4D263 438 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 OR14I1A6ND48 311 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 MEFVO15553 781 aaPredicted RBP7.04□□□□□ -1.28
CCDC6-203ENST00000518638 MARCH6O60337 910 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 DLX3O60479 287 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 DGKIO75912 1065 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 ITGB1P05556 798 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 TOP1P11387 765 aaKnown RBP7.04□□□□□ -1.28
CCDC6-203ENST00000518638 INSRRP14616 1297 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 ZNF200P98182 395 aaPredicted RBP7.04□□□□□ -1.28
CCDC6-203ENST00000518638 ITIH3Q06033 890 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 PPARAQ07869 468 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 KCNAB2Q13303 367 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 CAMK1Q14012 370 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 GPATCH4Q5T3I0 446 aaKnown RBP7.04□□□□□ -1.28
CCDC6-203ENST00000518638 ADGRF1Q5T601 910 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 ARHGEF16Q5VV41 709 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 CES5AQ6NT32 575 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 TAF2Q6P1X5 1199 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 RBM23Q86U06 439 aaKnown RBP7.04□□□□□ -1.28
CCDC6-203ENST00000518638 IFNL3Q8IZI9 196 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 KBTBD3Q8NAB2 608 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 SPPL3Q8TCT6 385 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 SPATA33Q96N06 139 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 RMDN3Q96TC7 470 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 DLL3Q9NYJ7 618 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms