RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 RAB34Q9BZG1 259 aa12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 HPS4Q9NQG7 708 aa12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 DDX19AQ9NUU7 478 aaKnown RBP12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 ABCA7Q8IZY2 2146 aa12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 DCLK1O15075 740 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 MEFVO15553 781 aaPredicted RBP12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 CLTAP09496 248 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 FOSBP53539 338 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 RING1Q06587 406 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 DMC1Q14565 340 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 PDGFRLQ15198 375 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 KYAT1Q16773 422 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 SEZ6Q53EL9 994 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 PMS2CLQ68D20 193 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 TRIM68Q6AZZ1 485 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 ZPBP2Q6X784 338 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 CPA6Q8N4T0 437 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 TTC9BQ8N6N2 239 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 C2orf15Q8WU43 125 aaKnown RBP12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 ZBTB45Q96K62 511 aaPredicted RBP12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 TSPAN18Q96SJ8 248 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 LPIN3Q9BQK8 851 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 TIPINQ9BVW5 301 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 SLC46A2Q9BY10 475 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 SMG9Q9H0W8 520 aaKnown RBP12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 SLC32A1Q9H598 525 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 IL21Q9HBE4 155 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 TDP1Q9NUW8 608 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 LRWD1Q9UFC0 647 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 DNM3Q9UQ16 869 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 NEUROG3Q9Y4Z2 214 aa12.69□□□□□ -0.38
TMEM55A-202ENST00000518359 ASCC3Q8N3C0 2202 aaKnown RBP12.68□□□□□ -0.38
TMEM55A-202ENST00000518359 ITPR1Q14643 2758 aa12.68□□□□□ -0.38
TMEM55A-202ENST00000518359 TTC26A0AVF1 554 aa12.68□□□□□ -0.38
TMEM55A-202ENST00000518359 SLC16A4O15374 487 aa12.68□□□□□ -0.38
TMEM55A-202ENST00000518359 ATF6P18850 670 aa12.68□□□□□ -0.38
TMEM55A-202ENST00000518359 FXR2P51116 673 aaKnown RBP eCLIP12.68□□□□□ -0.38
TMEM55A-202ENST00000518359 GALK1P51570 392 aa12.68□□□□□ -0.38
TMEM55A-202ENST00000518359 SMTNP53814 917 aa12.68□□□□□ -0.38
TMEM55A-202ENST00000518359 SPAG1Q07617 926 aa12.68□□□□□ -0.38
TMEM55A-202ENST00000518359 SMARCB1Q12824 385 aa12.68□□□□□ -0.38
TMEM55A-202ENST00000518359 LMAN2Q12907 356 aa12.68□□□□□ -0.38
TMEM55A-202ENST00000518359 PSMD2Q13200 908 aa12.68□□□□□ -0.38
TMEM55A-202ENST00000518359 ZNF174Q15697 407 aa12.68□□□□□ -0.38
TMEM55A-202ENST00000518359 ECM1Q16610 540 aa12.68□□□□□ -0.38
TMEM55A-202ENST00000518359 UAP1L1Q3KQV9 507 aa12.68□□□□□ -0.38
TMEM55A-202ENST00000518359 SLC39A12Q504Y0 691 aa12.68□□□□□ -0.38
TMEM55A-202ENST00000518359 DAW1Q8N136 415 aa12.68□□□□□ -0.38
TMEM55A-202ENST00000518359 MAB21L3Q8N8X9 362 aa12.68□□□□□ -0.38
TMEM55A-202ENST00000518359 TSTD1Q8NFU3 115 aa12.68□□□□□ -0.38
TMEM55A-202ENST00000518359 SNX29Q8TEQ0 813 aa12.68□□□□□ -0.38
TMEM55A-202ENST00000518359 GTF3C6Q969F1 213 aa12.68□□□□□ -0.38
TMEM55A-202ENST00000518359 TNRC6BQ9UPQ9 1833 aaKnown RBP12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 HELZP42694 1942 aaKnown RBP12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 OTOL1A6NHN0 477 aaPredicted RBP12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 CDX4O14627 284 aaPredicted RBP12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 TOP3BO95985 862 aaKnown RBP12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 GJA4P35212 333 aa12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 RDXP35241 583 aaKnown RBP12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 LILRA4P59901 499 aa12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 MCL1Q07820 350 aa12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 ZBTB6Q15916 424 aa12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 METTL23Q86XA0 190 aa12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 NECAB1Q8N987 351 aa12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 NSUN7Q8NE18 718 aaKnown RBP12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 DEFB124Q8NES8 71 aa12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 SPPL2BQ8TCT7 592 aa12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 MRPS31Q92665 395 aaKnown RBP12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 USP13Q92995 863 aaPredicted RBP12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 CD101Q93033 1021 aa12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 CHFRQ96EP1 664 aa12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 BICD1Q96G01 975 aa12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 SENP8Q96LD8 212 aa12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 NTPCRQ9BSD7 190 aaKnown RBP12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 POLR3BQ9NW08 1133 aaPredicted RBP12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 DSEQ9UL01 958 aa12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 TBX20Q9UMR3 447 aa12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 CCL26Q9Y258 94 aa12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 PI4KAP42356 2102 aa12.67□□□□□ -0.38
TMEM55A-202ENST00000518359 PTPRDP23468 1912 aa12.66□□□□□ -0.38
TMEM55A-202ENST00000518359 E9PMD0 336 aa12.66□□□□□ -0.38
TMEM55A-202ENST00000518359 H0YCG3 227 aa12.66□□□□□ -0.38
TMEM55A-202ENST00000518359 CYP11A1P05108 521 aa12.66□□□□□ -0.38
TMEM55A-202ENST00000518359 ARSAP15289 507 aa12.66□□□□□ -0.38
TMEM55A-202ENST00000518359 DHPSP49366 369 aaPredicted RBP12.66□□□□□ -0.38
TMEM55A-202ENST00000518359 NLRP12P59046 1061 aa12.66□□□□□ -0.38
TMEM55A-202ENST00000518359 PDIA5Q14554 519 aa12.66□□□□□ -0.38
TMEM55A-202ENST00000518359 ZNF268Q14587 947 aaPredicted RBP12.66□□□□□ -0.38
TMEM55A-202ENST00000518359 TTC38Q5R3I4 469 aa12.66□□□□□ -0.38
TMEM55A-202ENST00000518359 KRT79Q5XKE5 535 aa12.66□□□□□ -0.38
TMEM55A-202ENST00000518359 RINT1Q6NUQ1 792 aa12.66□□□□□ -0.38
TMEM55A-202ENST00000518359 KIAA1211LQ6NV74 962 aa12.66□□□□□ -0.38
TMEM55A-202ENST00000518359 THEM5Q8N1Q8 247 aa12.66□□□□□ -0.38
TMEM55A-202ENST00000518359 OR10T2Q8NGX3 314 aa12.66□□□□□ -0.38
TMEM55A-202ENST00000518359 GIPC2Q8TF65 315 aa12.66□□□□□ -0.38
TMEM55A-202ENST00000518359 SPIRE2Q8WWL2 714 aa12.66□□□□□ -0.38
TMEM55A-202ENST00000518359 ATP2A3Q93084 1043 aa12.66□□□□□ -0.38
TMEM55A-202ENST00000518359 NUSAP1Q9BXS6 441 aaKnown RBP12.66□□□□□ -0.38
TMEM55A-202ENST00000518359 TPSD1Q9BZJ3 242 aa12.66□□□□□ -0.38
TMEM55A-202ENST00000518359 ZCWPW1Q9H0M4 648 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms