RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 CEACAM1P13688 526 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 CSRP1P21291 193 aaKnown RBP9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 HOXC13P31276 330 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 AARSP49588 968 aaKnown RBP eCLIP9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 DGKEP52429 567 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 SPAG1Q07617 926 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 SMARCB1Q12824 385 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 DMC1Q14565 340 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 PDGFRLQ15198 375 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 SYT13Q7L8C5 426 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 TAS1R3Q7RTX0 852 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 CYP2U1Q7Z449 544 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 METTL23Q86XA0 190 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 CMTM8Q8IZV2 173 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 THEM5Q8N1Q8 247 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 CPA6Q8N4T0 437 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 RPLP0P6Q8NHW5 317 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 C2orf15Q8WU43 125 aaKnown RBP9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 ZCCHC14Q8WYQ9 949 aaKnown RBP9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 ZBTB45Q96K62 511 aaPredicted RBP9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 P2RY13Q9BPV8 354 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 LPIN3Q9BQK8 851 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 FAM83CQ9BQN1 747 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 SMG9Q9H0W8 520 aaKnown RBP9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 EBF3Q9H4W6 596 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 SLC32A1Q9H598 525 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 EBF1Q9UH73 591 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 DSEQ9UL01 958 aa9.83□□□□□ -0.84
LINCR-0001-201ENST00000517732 TNRC6BQ9UPQ9 1833 aaKnown RBP9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 PTPRDP23468 1912 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 PCNX2A6NKB5 2137 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 LNP1A1A4G5 178 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 E9PMD0 336 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 GIPC1O14908 333 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 LARGE1O95461 756 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 VASPP50552 380 aaPredicted RBP9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 GUCY1B3Q02153 619 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 MCL1Q07820 350 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 PDIA5Q14554 519 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 ECM1Q16610 540 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 SLC39A12Q504Y0 691 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 USP39Q53GS9 565 aaKnown RBP9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 RINT1Q6NUQ1 792 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 CD302Q8IX05 232 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 DAW1Q8N136 415 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 TTC9BQ8N6N2 239 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 MAB21L3Q8N8X9 362 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 TSTD1Q8NFU3 115 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 SPPL2BQ8TCT7 592 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 SPIRE2Q8WWL2 714 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 MRPS31Q92665 395 aaKnown RBP9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 CD101Q93033 1021 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 C8orf76Q96K31 380 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 SENP8Q96LD8 212 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 SCNM1Q9BWG6 230 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 SLC46A2Q9BY10 475 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 FOXP1Q9H334 677 aaPredicted RBP9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 RPF1Q9H9Y2 349 aaKnown RBP9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 HPS4Q9NQG7 708 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 TDP1Q9NUW8 608 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 CEP295Q9C0D2 2601 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 ADAMTS9Q9P2N4 1935 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 PLXND1Q9Y4D7 1925 aa9.82□□□□□ -0.84
LINCR-0001-201ENST00000517732 TTC26A0AVF1 554 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 SOBPA7XYQ1 873 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 SFI1A8K8P3 1242 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 DCLK1O15075 740 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 MEFVO15553 781 aaPredicted RBP9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 JAK2O60674 1132 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 PLS3P13797 630 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 ATF6P18850 670 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 SPINK2P20155 84 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 RDXP35241 583 aaKnown RBP9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 IFNAR2P48551 515 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 TRAPPC10P48553 1259 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 LIG4P49917 911 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 GALK1P51570 392 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 LILRA4P59901 499 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 ANAPC15P60006 121 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 LMAN2Q12907 356 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 NR1H3Q13133 447 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 ME3Q16798 604 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 UAP1L1Q3KQV9 507 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 PMS2CLQ68D20 193 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 TRIM68Q6AZZ1 485 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 DCP1BQ8IZD4 617 aaKnown RBP9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 GIPC2Q8TF65 315 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 FAM212AQ96EL1 285 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 NTPCRQ9BSD7 190 aaKnown RBP9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 RUSC1Q9BVN2 902 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 IL21Q9HBE4 155 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 UXTQ9UBK9 157 aaPredicted RBP9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 LHX6Q9UPM6 363 aa9.81□□□□□ -0.84
LINCR-0001-201ENST00000517732 IGF2RP11717 2491 aa9.8□□□□□ -0.84
LINCR-0001-201ENST00000517732 SRRM3A6NNA2 597 aaPredicted RBP9.8□□□□□ -0.84
LINCR-0001-201ENST00000517732 LACTBL1A8MY62 500 aa9.8□□□□□ -0.84
LINCR-0001-201ENST00000517732 HNRNPDLO14979 420 aaKnown RBP9.8□□□□□ -0.84
LINCR-0001-201ENST00000517732 CYP11A1P05108 521 aa9.8□□□□□ -0.84
LINCR-0001-201ENST00000517732 CSH1P0DML2 217 aa9.8□□□□□ -0.84
LINCR-0001-201ENST00000517732 CSH2P0DML3 217 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms