RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 H3BQF6 201 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 ADAMTS4O75173 837 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 VDRP11473 427 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 PTPN20Q4JDL3 420 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 XKR4Q5GH76 650 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 FAM228AQ86W67 206 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 EIF1ADQ8N9N8 165 aaKnown RBP16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 C3orf20Q8ND61 904 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 PLVAPQ9BX97 442 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 RNF19AQ9NV58 838 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 KLK14Q9P0G3 267 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 STRIP2Q9ULQ0 834 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 UBQLN1Q9UMX0 589 aaKnown RBP16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 TRIP11Q15643 1979 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 SMIM28A0A1B0GU29 152 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 PSTPIP1O43586 416 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 PHF2O75151 1096 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 MICAL2O94851 1124 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 TAP1Q03518 808 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 NNTQ13423 1086 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 CUL1Q13616 776 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 CNGA2Q16280 664 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 C9orf57Q5W0N0 161 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 RHOT1Q8IXI2 618 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 MCEEQ96PE7 176 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 ACBD3Q9H3P7 528 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 XPNPEP3Q9NQH7 507 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 PARP2Q9UGN5 583 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 IPPQ9Y573 584 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 CDY2AQ9Y6F7 541 aa16.36■□□□□ 0.21
THUMPD3-210ENST00000515662 O00370 1275 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 HMGCRP04035 888 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 KCNE1P15382 129 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 CCND3P30281 292 aaPredicted RBP16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 TAS2R40P59535 323 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 DR1Q01658 176 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 SP3Q02447 781 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 ZNF252P-AS1Q0IIN9 211 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 SIX1Q15475 284 aaPredicted RBP16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 SGO2Q562F6 1265 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 SMG8Q8ND04 991 aaKnown RBP16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 SEC14L1Q92503 715 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 WNT8BQ93098 351 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 TSPAN18Q96SJ8 248 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 NT5C1AQ9BXI3 368 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 RNF186Q9NXI6 227 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 LCMT1Q9UIC8 334 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 MTUS1Q9ULD2 1270 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 KIAA1257Q9ULG3 409 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 USTQ9Y2C2 406 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 TRPV2Q9Y5S1 764 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 SNX9Q9Y5X1 595 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 M0QZ92 97 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 FSCN2O14926 492 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 FAM153BP0C7A2 387 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 CHRNA3P32297 505 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 GPS2Q13227 327 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 CYP1B1Q16678 543 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 FAM153CQ494X1 144 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 DCUN1D2Q6PH85 259 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 SERINC5Q86VE9 423 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 CPXM1Q96SM3 734 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 MRPL45Q9BRJ2 306 aaKnown RBP16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 TJP2Q9UDY2 1190 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 FAM153AQ9UHL3 310 aa16.35■□□□□ 0.21
THUMPD3-210ENST00000515662 M0QYV0 167 aa16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 CD4P01730 458 aa16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 RARAP10276 462 aa16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 PRKAR2AP13861 404 aaKnown RBP16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 ELNP15502 786 aa16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 ECHS1P30084 290 aa16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 AARSP49588 968 aaKnown RBP eCLIP16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 OGDHQ02218 1023 aa16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 DHX34Q14147 1143 aaKnown RBP16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 FAM47CQ5HY64 1035 aa16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 TWF2Q6IBS0 349 aaKnown RBP16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 RSPH3Q86UC2 560 aa16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 DDX42Q86XP3 938 aaKnown RBP eCLIP16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 MAGOHBQ96A72 148 aaKnown RBP16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 C18orf8Q96DM3 657 aa16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 CAPNS2Q96L46 248 aa16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 CASP8AP2Q9UKL3 1982 aa16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 PIRO00625 290 aa16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 CYP3A5P20815 502 aa16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 GPD2P43304 727 aa16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 PDCD11Q14690 1871 aaKnown RBP16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 KCTD19Q17RG1 926 aaPredicted RBP16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 LCLAT1Q6UWP7 414 aa16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 KATNAL2Q8IYT4 538 aa16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 ARRDC4Q8NCT1 418 aa16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 KLHDC9Q8NEP7 349 aa16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 TRIM51Q9BSJ1 452 aa16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 PCYOX1Q9UHG3 505 aa16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 UTP11Q9Y3A2 253 aaKnown RBP16.34■□□□□ 0.21
THUMPD3-210ENST00000515662 FAM187AA6NFU0 413 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 SIGLEC16A6NMB1 481 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 ERBB2P04626 1255 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms