RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 KRT9P35527 623 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 IGHMBP2P38935 993 aaKnown RBP7.6□□□□□ -1.19
NIPBL-208ENST00000514335 CCNFP41002 786 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 TM4SF4P48230 202 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 SEPT6Q14141 434 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 ERV3-1Q14264 604 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 CWF19L2Q2TBE0 894 aaKnown RBP7.6□□□□□ -1.19
NIPBL-208ENST00000514335 CEP55Q53EZ4 464 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 KCNT1Q5JUK3 1230 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 IYDQ6PHW0 289 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 GLRX5Q86SX6 157 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 PALM2Q8IXS6 379 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 FBXO30Q8TB52 745 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 BCAS4Q8TDM0 211 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 EXOC2Q96KP1 924 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 TRAPPC9Q96Q05 1148 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 VPS35Q96QK1 796 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 FRMD8P1Q9BZ68 369 aaPredicted RBP7.6□□□□□ -1.19
NIPBL-208ENST00000514335 SENP6Q9GZR1 1112 aaPredicted RBP7.6□□□□□ -1.19
NIPBL-208ENST00000514335 MTFR1LQ9H019 292 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 EPS8L2Q9H6S3 715 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 ZC3H11AO75152 810 aaKnown RBP eCLIP7.6□□□□□ -1.19
NIPBL-208ENST00000514335 F13A1P00488 732 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 ASGR1P07306 291 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 TYRP1P17643 537 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 GAP43P17677 238 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 HOXA6P31267 233 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 HOXD13P35453 343 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 CLK3P49761 638 aaKnown RBP7.6□□□□□ -1.19
NIPBL-208ENST00000514335 SLC26A5P58743 744 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 ZNF33BQ06732 778 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 NCF4Q15080 339 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 PPP6R3Q5H9R7 873 aaPredicted RBP7.6□□□□□ -1.19
NIPBL-208ENST00000514335 RPS26P11Q5JNZ5 115 aaPredicted RBP7.6□□□□□ -1.19
NIPBL-208ENST00000514335 SLFN13Q68D06 897 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 PDPK2PQ6A1A2 396 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 CEP85Q6P2H3 762 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 DRICH1Q6PGQ1 229 aaPredicted RBP7.6□□□□□ -1.19
NIPBL-208ENST00000514335 ZNF852Q6ZMS4 543 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 SULF1Q8IWU6 871 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 CDH26Q8IXH8 852 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 OR10Z1Q8NGY1 313 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 OR6S1Q8NH40 331 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 HDAC2Q92769 488 aaKnown RBP7.6□□□□□ -1.19
NIPBL-208ENST00000514335 NUDCD1Q96RS6 583 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 PIGSQ96S52 555 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 PI4K2AQ9BTU6 479 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 ETNK2Q9NVF9 386 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 TAS2R7Q9NYW3 318 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 CPNE7Q9UBL6 633 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 PCDHGA11Q9Y5H2 935 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 IKBKBO14920 756 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 IDH3BO43837 385 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 SSX5O60225 188 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 ZBED1O96006 694 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 CHRM5P08912 532 aaPredicted RBP7.59□□□□□ -1.19
NIPBL-208ENST00000514335 EEF2P13639 858 aaKnown RBP7.59□□□□□ -1.19
NIPBL-208ENST00000514335 TRIM27P14373 513 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 TCEA1P23193 301 aaKnown RBP7.59□□□□□ -1.19
NIPBL-208ENST00000514335 PTGS1P23219 599 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 KELP23276 732 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 RCVRNP35243 200 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 HNF4AP41235 474 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 NPTX2P47972 431 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 IFNAR2P48551 515 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 HNMTP50135 292 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 ARHGDIAP52565 204 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 YARSP54577 528 aaKnown RBP7.59□□□□□ -1.19
NIPBL-208ENST00000514335 HPCAP84074 193 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 RHAGQ02094 409 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 KCNAB2Q13303 367 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 SQSTM1Q13501 440 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 SGSM1Q2NKQ1 1148 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 AKAP4Q5JQC9 854 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 FOXB2Q5VYV0 432 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 C8orf74Q6P047 294 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 PGM2L1Q6PCE3 622 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 TRIM65Q6PJ69 517 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 USP43Q70EL4 1123 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 FAM186BQ8IYM0 893 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 ZGPATQ8N5A5 531 aaKnown RBP7.59□□□□□ -1.19
NIPBL-208ENST00000514335 PCSK9Q8NBP7 692 aaKnown RBP7.59□□□□□ -1.19
NIPBL-208ENST00000514335 NOA1Q8NC60 698 aaKnown RBP7.59□□□□□ -1.19
NIPBL-208ENST00000514335 GATA6Q92908 595 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 EMID1Q96A84 441 aaPredicted RBP7.59□□□□□ -1.19
NIPBL-208ENST00000514335 DNAJC1Q96KC8 554 aaKnown RBP7.59□□□□□ -1.19
NIPBL-208ENST00000514335 PHF12Q96QT6 1004 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 TUBGCP5Q96RT8 1024 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 SDF4Q9BRK5 362 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 BRIP1Q9BX63 1249 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 L2HGDHQ9H9P8 463 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 UCK1Q9HA47 277 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 OBP2AQ9NY56 170 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 AP3M1Q9Y2T2 418 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 PIAS3Q9Y6X2 628 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 SH3TC1Q8TE82 1336 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 SMCO2A6NFE2 343 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 CCDC69A6NI79 296 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 B4E1Z4 1266 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 WASLO00401 505 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms