RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 TANGO6Q9C0B7 1094 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 UPF3AQ9H1J1 476 aaKnown RBP4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 ABHD16BQ9H3Z7 469 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 HIPK3Q9H422 1215 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 RPAP3Q9H6T3 665 aaPredicted RBP4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 RIOX1Q9H6W3 641 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 BRWD1Q9NSI6 2320 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 CTNNA3Q9UI47 895 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 ADAMTS5Q9UNA0 930 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 SYNRGQ9UMZ2 1314 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 A0A0G2JMZ2 1700 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 ZAR1LA6NP61 321 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 NCK2O43639 380 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 GH2P01242 217 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 SSBP05455 408 aaKnown RBP eCLIP4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 C6orf222P0C671 652 aaPredicted RBP4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 CDK4P11802 303 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 MYOGP15173 224 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 NASPP49321 788 aaPredicted RBP4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 TIMM10P62072 90 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 TOB2Q14106 344 aaPredicted RBP4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 MVPQ14764 893 aaKnown RBP4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 ABCB5Q2M3G0 1257 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 WDR72Q3MJ13 1102 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 CERKLQ49MI3 558 aaPredicted RBP4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 HERC4Q5GLZ8 1057 aaPredicted RBP4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 TMED8Q6PL24 325 aaPredicted RBP4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 HERC6Q8IVU3 1022 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 WDR63Q8IWG1 891 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 RBM12BQ8IXT5 1001 aaKnown RBP4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 MAGEB6Q8N7X4 407 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 TGFBRAP1Q8WUH2 860 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 SREK1Q8WXA9 508 aaKnown RBP4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 ARNTL2Q8WYA1 636 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 USP44Q9H0E7 712 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 DNAJC18Q9H819 358 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 RAI14Q9P0K7 980 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 SERPINB13Q9UIV8 391 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 DSEQ9UL01 958 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 Q9Y3F1 56 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 WDFY4Q6ZS81 3184 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 TNKSO95271 1327 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 CDK5RAP2Q96SN8 1893 aa4.41□□□□□ -1.7
PDLIM5-218ENST00000513341 SIPA1L1O43166 1804 aa4.4□□□□□ -1.7
PDLIM5-218ENST00000513341 EPOPA6NHQ4 379 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 ZEB2O60315 1214 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 BAIAP3O94812 1187 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 PARNO95453 639 aaKnown RBP4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 SNAI1O95863 264 aaPredicted RBP4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 IL9P15248 144 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 KCNA5P22460 613 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 STAT3P40763 770 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 ID4P47928 161 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 CCL23P55773 120 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 ERVK-21P61565 698 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 TCF15Q12870 199 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 ITGA7Q13683 1181 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 ACVR2BQ13705 512 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 PLS1Q14651 629 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 TNNI3KQ59H18 835 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 ADGRG3Q86Y34 549 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 ADHFE1Q8IWW8 467 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 SUGP1Q8IWZ8 645 aaKnown RBP4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 FAM169BQ8N8A8 192 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 SPATA5Q8NB90 893 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 PRSS33Q8NF86 280 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 ACER1Q8TDN7 264 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 SH2D4AQ9H788 454 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 NRDE2Q9H7Z3 1164 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 CERS4Q9HA82 394 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 SLC39A2Q9NP94 309 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 HMG20BQ9P0W2 317 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 LRP2BPQ9P2M1 347 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 ZNHIT2Q9UHR6 403 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 RIF1Q5UIP0 2472 aaKnown RBP4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 FLT1P17948 1338 aa4.4□□□□□ -1.71
PDLIM5-218ENST00000513341 FOCADQ5VW36 1801 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 CFAP54Q96N23 3096 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 PPFIA4O75335 1185 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 FLOT1O75955 427 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 PGK2P07205 417 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 FGRP09769 529 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 UQCRFS1P1P0C7P4 283 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 GNAT1P11488 350 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 PDE6AP16499 860 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 ATP2B1P20020 1258 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 GRK2P25098 689 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 GRK3P35626 688 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 EXOSC9Q06265 439 aaKnown RBP4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 TMEM132BQ14DG7 1078 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 PTPROQ16827 1216 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 KIZQ2M2Z5 673 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 CCDC144BQ3MJ40 725 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 KRT40Q6A162 431 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 NAA16Q6N069 864 aaPredicted RBP4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 MAPKAPK5Q8IW41 473 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 KCTD13Q8WZ19 329 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 ATOH1Q92858 354 aaPredicted RBP4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 MIEF2Q96C03 454 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 PABPC5Q96DU9 382 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms