RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 RNF40O75150 1001 aa15.12■□□□□ 0.01
SPCS3-204ENST00000513139 PAX3P23760 479 aa15.12■□□□□ 0.01
SPCS3-204ENST00000513139 CCT6AP40227 531 aaKnown RBP15.12■□□□□ 0.01
SPCS3-204ENST00000513139 TUFMP49411 452 aaKnown RBP15.12■□□□□ 0.01
SPCS3-204ENST00000513139 CREB5Q02930 508 aa15.12■□□□□ 0.01
SPCS3-204ENST00000513139 TRIM29Q14134 588 aa15.12■□□□□ 0.01
SPCS3-204ENST00000513139 NOLC1Q14978 699 aaKnown RBP eCLIP15.12■□□□□ 0.01
SPCS3-204ENST00000513139 VEPH1Q14D04 833 aa15.12■□□□□ 0.01
SPCS3-204ENST00000513139 ANKRD1Q15327 319 aa15.12■□□□□ 0.01
SPCS3-204ENST00000513139 ZBTB6Q15916 424 aa15.12■□□□□ 0.01
SPCS3-204ENST00000513139 ECM1Q16610 540 aa15.12■□□□□ 0.01
SPCS3-204ENST00000513139 SYT13Q7L8C5 426 aa15.12■□□□□ 0.01
SPCS3-204ENST00000513139 C11orf74Q86VG3 221 aa15.12■□□□□ 0.01
SPCS3-204ENST00000513139 CMTM8Q8IZV2 173 aa15.12■□□□□ 0.01
SPCS3-204ENST00000513139 CHFRQ96EP1 664 aa15.12■□□□□ 0.01
SPCS3-204ENST00000513139 GCNAQ96QF7 691 aa15.12■□□□□ 0.01
SPCS3-204ENST00000513139 TSPAN18Q96SJ8 248 aa15.12■□□□□ 0.01
SPCS3-204ENST00000513139 NTPCRQ9BSD7 190 aaKnown RBP15.12■□□□□ 0.01
SPCS3-204ENST00000513139 HPS4Q9NQG7 708 aa15.12■□□□□ 0.01
SPCS3-204ENST00000513139 CACNA1EQ15878 2313 aa15.11■□□□□ 0.01
SPCS3-204ENST00000513139 TNRC6BQ9UPQ9 1833 aaKnown RBP15.11■□□□□ 0.01
SPCS3-204ENST00000513139 TTC26A0AVF1 554 aa15.11■□□□□ 0.01
SPCS3-204ENST00000513139 SOBPA7XYQ1 873 aa15.11■□□□□ 0.01
SPCS3-204ENST00000513139 APBB3O95704 486 aa15.11■□□□□ 0.01
SPCS3-204ENST00000513139 ARMCX5Q6P1M9 558 aa15.11■□□□□ 0.01
SPCS3-204ENST00000513139 LRSAM1Q6UWE0 723 aa15.11■□□□□ 0.01
SPCS3-204ENST00000513139 DSTYKQ6XUX3 929 aa15.11■□□□□ 0.01
SPCS3-204ENST00000513139 TTC9BQ8N6N2 239 aa15.11■□□□□ 0.01
SPCS3-204ENST00000513139 ZBTB45Q96K62 511 aaPredicted RBP15.11■□□□□ 0.01
SPCS3-204ENST00000513139 HHIPQ96QV1 700 aa15.11■□□□□ 0.01
SPCS3-204ENST00000513139 SLC46A2Q9BY10 475 aa15.11■□□□□ 0.01
SPCS3-204ENST00000513139 KIF9Q9HAQ2 790 aa15.11■□□□□ 0.01
SPCS3-204ENST00000513139 IL21Q9HBE4 155 aa15.11■□□□□ 0.01
SPCS3-204ENST00000513139 TMEM9BQ9NQ34 198 aa15.11■□□□□ 0.01
SPCS3-204ENST00000513139 KCNG1Q9UIX4 513 aa15.11■□□□□ 0.01
SPCS3-204ENST00000513139 UBQLN1Q9UMX0 589 aaKnown RBP15.11■□□□□ 0.01
SPCS3-204ENST00000513139 KIAA1024Q9UPX6 916 aa15.11■□□□□ 0.01
SPCS3-204ENST00000513139 ANAPC1Q9H1A4 1944 aa15.1■□□□□ 0.01
SPCS3-204ENST00000513139 PLXND1Q9Y4D7 1925 aa15.1■□□□□ 0.01
SPCS3-204ENST00000513139 OTOL1A6NHN0 477 aaPredicted RBP15.1■□□□□ 0.01
SPCS3-204ENST00000513139 KHNYNO15037 678 aaKnown RBP15.1■□□□□ 0.01
SPCS3-204ENST00000513139 XPOTO43592 962 aaKnown RBP15.1■□□□□ 0.01
SPCS3-204ENST00000513139 HIP1RO75146 1068 aa15.1■□□□□ 0.01
SPCS3-204ENST00000513139 GABBR2O75899 941 aa15.1■□□□□ 0.01
SPCS3-204ENST00000513139 LARGE1O95461 756 aa15.1■□□□□ 0.01
SPCS3-204ENST00000513139 EGFP01133 1207 aa15.1■□□□□ 0.01
SPCS3-204ENST00000513139 CLTAP09496 248 aa15.1■□□□□ 0.01
SPCS3-204ENST00000513139 HARSP12081 509 aaKnown RBP15.1■□□□□ 0.01
SPCS3-204ENST00000513139 DDX6P26196 483 aaKnown RBP eCLIP15.1■□□□□ 0.01
SPCS3-204ENST00000513139 CYP4F8P98187 520 aa15.1■□□□□ 0.01
SPCS3-204ENST00000513139 MCL1Q07820 350 aa15.1■□□□□ 0.01
SPCS3-204ENST00000513139 STRN3Q13033 797 aa15.1■□□□□ 0.01
SPCS3-204ENST00000513139 PDIA5Q14554 519 aa15.1■□□□□ 0.01
SPCS3-204ENST00000513139 ZPBP2Q6X784 338 aa15.1■□□□□ 0.01
SPCS3-204ENST00000513139 ACDQ96AP0 544 aa15.1■□□□□ 0.01
SPCS3-204ENST00000513139 SCNM1Q9BWG6 230 aa15.1■□□□□ 0.01
SPCS3-204ENST00000513139 EBF3Q9H4W6 596 aa15.1■□□□□ 0.01
SPCS3-204ENST00000513139 DDX19AQ9NUU7 478 aaKnown RBP15.1■□□□□ 0.01
SPCS3-204ENST00000513139 ANKFY1Q9P2R3 1169 aa15.1■□□□□ 0.01
SPCS3-204ENST00000513139 TBX20Q9UMR3 447 aa15.1■□□□□ 0.01
SPCS3-204ENST00000513139 GCN1Q92616 2671 aaKnown RBP15.1■□□□□ 0.01
SPCS3-204ENST00000513139 CEP192Q8TEP8 1941 aa15.09■□□□□ 0.01
SPCS3-204ENST00000513139 CDX4O14627 284 aaPredicted RBP15.09■□□□□ 0.01
SPCS3-204ENST00000513139 SLC16A4O15374 487 aa15.09■□□□□ 0.01
SPCS3-204ENST00000513139 CLDN3O15551 220 aa15.09■□□□□ 0.01
SPCS3-204ENST00000513139 SOAT2O75908 522 aa15.09■□□□□ 0.01
SPCS3-204ENST00000513139 CXCL8P10145 99 aa15.09■□□□□ 0.01
SPCS3-204ENST00000513139 ODC1P11926 461 aa15.09■□□□□ 0.01
SPCS3-204ENST00000513139 SPINK2P20155 84 aa15.09■□□□□ 0.01
SPCS3-204ENST00000513139 AVPR1AP37288 418 aa15.09■□□□□ 0.01
SPCS3-204ENST00000513139 GALK1P51570 392 aa15.09■□□□□ 0.01
SPCS3-204ENST00000513139 NEK4P51957 841 aa15.09■□□□□ 0.01
SPCS3-204ENST00000513139 SMARCB1Q12824 385 aa15.09■□□□□ 0.01
SPCS3-204ENST00000513139 MAPK7Q13164 816 aa15.09■□□□□ 0.01
SPCS3-204ENST00000513139 SEZ6Q53EL9 994 aa15.09■□□□□ 0.01
SPCS3-204ENST00000513139 NSUN7Q8NE18 718 aaKnown RBP15.09■□□□□ 0.01
SPCS3-204ENST00000513139 SPIRE2Q8WWL2 714 aa15.09■□□□□ 0.01
SPCS3-204ENST00000513139 GTF3C6Q969F1 213 aa15.09■□□□□ 0.01
SPCS3-204ENST00000513139 P2RY13Q9BPV8 354 aa15.09■□□□□ 0.01
SPCS3-204ENST00000513139 LPIN3Q9BQK8 851 aa15.09■□□□□ 0.01
SPCS3-204ENST00000513139 TIPINQ9BVW5 301 aa15.09■□□□□ 0.01
SPCS3-204ENST00000513139 SMG9Q9H0W8 520 aaKnown RBP15.09■□□□□ 0.01
SPCS3-204ENST00000513139 FBRSL1Q9HCM7 1045 aaKnown RBP15.09■□□□□ 0.01
SPCS3-204ENST00000513139 TDP1Q9NUW8 608 aa15.09■□□□□ 0.01
SPCS3-204ENST00000513139 LRWD1Q9UFC0 647 aa15.09■□□□□ 0.01
SPCS3-204ENST00000513139 DNM3Q9UQ16 869 aa15.09■□□□□ 0.01
SPCS3-204ENST00000513139 LOC400499M0QZD8 3231 aa15.08■□□□□ 0.01
SPCS3-204ENST00000513139 HELZP42694 1942 aaKnown RBP15.08■□□□□ 0
SPCS3-204ENST00000513139 ADAMTS20P59510 1910 aa15.08■□□□□ 0
SPCS3-204ENST00000513139 DCLK1O15075 740 aa15.08■□□□□ 0
SPCS3-204ENST00000513139 CYP11A1P05108 521 aa15.08■□□□□ 0
SPCS3-204ENST00000513139 ATF6P18850 670 aa15.08■□□□□ 0
SPCS3-204ENST00000513139 LILRA4P59901 499 aa15.08■□□□□ 0
SPCS3-204ENST00000513139 PPP2R3AQ06190 1150 aa15.08■□□□□ 0
SPCS3-204ENST00000513139 BFSP1Q12934 665 aa15.08■□□□□ 0
SPCS3-204ENST00000513139 DMC1Q14565 340 aa15.08■□□□□ 0
SPCS3-204ENST00000513139 PDGFRLQ15198 375 aa15.08■□□□□ 0
SPCS3-204ENST00000513139 SAFBQ15424 915 aaKnown RBP eCLIP15.08■□□□□ 0
SPCS3-204ENST00000513139 ZNF174Q15697 407 aa15.08■□□□□ 0
SPCS3-204ENST00000513139 TAF12Q16514 161 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 591 ms