RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 TNFSF13BQ9Y275 285 aa7.87□□□□□ -1.15
USP46-208ENST00000512656 TDRD15B5MCY1 1934 aaKnown RBP7.87□□□□□ -1.15
USP46-208ENST00000512656 CACNA1AO00555 2505 aa7.87□□□□□ -1.15
USP46-208ENST00000512656 MYO15AQ9UKN7 3530 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 FAM229AH3BQW9 127 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 CCL16O15467 120 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 RGS9O75916 674 aaPredicted RBP7.86□□□□□ -1.15
USP46-208ENST00000512656 MICAL2O94851 1124 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 MCF2P10911 925 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 U2AF2P26368 475 aaKnown RBP eCLIP7.86□□□□□ -1.15
USP46-208ENST00000512656 ELF1P32519 619 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 PRPHP41219 470 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 PEX3P56589 373 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 PFKPQ01813 784 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 NRG1Q02297 640 aaPredicted RBP7.86□□□□□ -1.15
USP46-208ENST00000512656 NAB2Q15742 525 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 SWI5Q1ZZU3 235 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 RSPO4Q2I0M5 234 aaPredicted RBP7.86□□□□□ -1.15
USP46-208ENST00000512656 ZNF568Q3ZCX4 644 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 NKAPLQ5M9Q1 402 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 AXDND1Q5T1B0 1012 aaPredicted RBP7.86□□□□□ -1.15
USP46-208ENST00000512656 PSAPL1Q6NUJ1 521 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 ZC3H14Q6PJT7 736 aaKnown RBP7.86□□□□□ -1.15
USP46-208ENST00000512656 DTHD1Q6ZMT9 781 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 ASCL5Q7RTU5 278 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 DTWD1Q8N5C7 304 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 C4orf32Q8N8J7 132 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 IGSF22Q8N9C0 903 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 SLC7A14Q8TBB6 771 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 GPR152Q8TDT2 470 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 TTC9Q92623 222 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 PPP1R10Q96QC0 940 aaKnown RBP7.86□□□□□ -1.15
USP46-208ENST00000512656 ACO2Q99798 780 aaKnown RBP7.86□□□□□ -1.15
USP46-208ENST00000512656 KIFC3Q9BVG8 833 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 C17orf75Q9HAS0 396 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 ARHGEF3Q9NR81 526 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 CACNG4Q9UBN1 327 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 USP20Q9Y2K6 914 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 SIT1Q9Y3P8 196 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 BACE2Q9Y5Z0 518 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 NUMBLQ9Y6R0 609 aa7.86□□□□□ -1.15
USP46-208ENST00000512656 C2orf16Q68DN1 1984 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 SMIM28A0A1B0GU29 152 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 H7C4K7 107 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 SYN3O14994 580 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 KCNE1P15382 129 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 ITGB7P26010 798 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 GRNP28799 593 aaKnown RBP7.85□□□□□ -1.15
USP46-208ENST00000512656 RPL9P32969 192 aaKnown RBP7.85□□□□□ -1.15
USP46-208ENST00000512656 NPTX2P47972 431 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 CLCNKBP51801 687 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 PRKCQQ04759 706 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 STRN3Q13033 797 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 ELOAQ14241 798 aaKnown RBP7.85□□□□□ -1.15
USP46-208ENST00000512656 ECM1Q16610 540 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 UPP1Q16831 310 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 PABPC1LQ4VXU2 614 aaKnown RBP7.85□□□□□ -1.15
USP46-208ENST00000512656 RILPL1Q5EBL4 403 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 GLRA4Q5JXX5 417 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 ZNF461Q8TAF7 563 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 KCNG4Q8TDN1 519 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 FGF13Q92913 245 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 ACAP3Q96P50 834 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 TARS2Q9BW92 718 aaKnown RBP7.85□□□□□ -1.15
USP46-208ENST00000512656 CDT1Q9H211 546 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 POLD4Q9HCU8 107 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 KMT5AQ9NQR1 393 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 TPSG1Q9NRR2 321 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 GDE1Q9NZC3 331 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 MRPS23Q9Y3D9 190 aaKnown RBP7.85□□□□□ -1.15
USP46-208ENST00000512656 NUB1Q9Y5A7 615 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 CDY1Q9Y6F8 540 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 DMDP11532 3685 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 PLXNA3P51805 1871 aa7.85□□□□□ -1.15
USP46-208ENST00000512656 MTCL1Q9Y4B5 1905 aaKnown RBP7.84□□□□□ -1.15
USP46-208ENST00000512656 DOCK8Q8NF50 2099 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 E9PMD0 336 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 H0YCG3 227 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 PODXLO00592 558 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 PRRG1O14668 218 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 ZNF197O14709 1029 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 ADAM12O43184 909 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 HIP1RO75146 1068 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 TOM1L1O75674 476 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 LRG1P02750 347 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 EDN1P05305 212 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 PTPN2P17706 415 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 SCP2P22307 547 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 GUCY2CP25092 1073 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 TKTP29401 623 aaKnown RBP7.84□□□□□ -1.15
USP46-208ENST00000512656 MAGEA9P43362 315 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 TOB1P50616 345 aaPredicted RBP7.84□□□□□ -1.15
USP46-208ENST00000512656 STARD6P59095 220 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 OSTNP61366 133 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 GPC5P78333 572 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 NTHL1P78549 312 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 GPLD1P80108 840 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 XKR4Q5GH76 650 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 SPECC1Q5M775 1068 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 TPGS2Q68CL5 300 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms