RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 CCDC94Q9BW85 323 aaPredicted RBP13.08□□□□□ -0.32
COPS4-210ENST00000511708 CDT1Q9H211 546 aa13.08□□□□□ -0.32
COPS4-210ENST00000511708 NCOA5Q9HCD5 579 aaKnown RBP13.08□□□□□ -0.32
COPS4-210ENST00000511708 FSCN3Q9NQT6 498 aa13.08□□□□□ -0.32
COPS4-210ENST00000511708 CNTN3Q9P232 1028 aa13.08□□□□□ -0.32
COPS4-210ENST00000511708 HSFX1Q9UBD0 423 aa13.08□□□□□ -0.32
COPS4-210ENST00000511708 SLC6A14Q9UN76 642 aa13.08□□□□□ -0.32
COPS4-210ENST00000511708 TNFSF13BQ9Y275 285 aa13.08□□□□□ -0.32
COPS4-210ENST00000511708 TSC2P49815 1807 aa13.08□□□□□ -0.32
COPS4-210ENST00000511708 A0A087WV48 116 aa13.07□□□□□ -0.32
COPS4-210ENST00000511708 OR6C75A6NL08 312 aa13.07□□□□□ -0.32
COPS4-210ENST00000511708 SOAT2O75908 522 aa13.07□□□□□ -0.32
COPS4-210ENST00000511708 LIG1P18858 919 aa13.07□□□□□ -0.32
COPS4-210ENST00000511708 PDGFRLQ15198 375 aa13.07□□□□□ -0.32
COPS4-210ENST00000511708 ARMCX6Q7L4S7 300 aa13.07□□□□□ -0.32
COPS4-210ENST00000511708 MINDY1Q8N5J2 469 aa13.07□□□□□ -0.32
COPS4-210ENST00000511708 DEPTORQ8TB45 409 aa13.07□□□□□ -0.32
COPS4-210ENST00000511708 RLN3Q8WXF3 142 aa13.07□□□□□ -0.32
COPS4-210ENST00000511708 SLC39A7Q92504 469 aa13.07□□□□□ -0.32
COPS4-210ENST00000511708 AIFM3Q96NN9 605 aa13.07□□□□□ -0.32
COPS4-210ENST00000511708 NAP1L4Q99733 375 aaKnown RBP13.07□□□□□ -0.32
COPS4-210ENST00000511708 ECT2Q9H8V3 914 aa13.07□□□□□ -0.32
COPS4-210ENST00000511708 KIF9Q9HAQ2 790 aa13.07□□□□□ -0.32
COPS4-210ENST00000511708 PTPRHQ9HD43 1115 aa13.07□□□□□ -0.32
COPS4-210ENST00000511708 DNAAF2Q9NVR5 837 aaKnown RBP13.07□□□□□ -0.32
COPS4-210ENST00000511708 MMP17Q9ULZ9 603 aa13.07□□□□□ -0.32
COPS4-210ENST00000511708 RAI2Q9Y5P3 530 aa13.07□□□□□ -0.32
COPS4-210ENST00000511708 COL6A6A6NMZ7 2263 aa13.07□□□□□ -0.32
COPS4-210ENST00000511708 ATXN2Q99700 1313 aaKnown RBP13.07□□□□□ -0.32
COPS4-210ENST00000511708 KNTC1P50748 2209 aa13.07□□□□□ -0.32
COPS4-210ENST00000511708 ATMQ13315 3056 aa13.07□□□□□ -0.32
COPS4-210ENST00000511708 GJB3O75712 270 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 DEXIO95424 95 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 CFIP05156 583 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 SERPINF2P08697 491 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 HNRNPLP14866 589 aaKnown RBP eCLIP13.06□□□□□ -0.32
COPS4-210ENST00000511708 ATP2B1P20020 1258 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 ITPKAP23677 461 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 MARCKSP29966 332 aaPredicted RBP13.06□□□□□ -0.32
COPS4-210ENST00000511708 AARSP49588 968 aaKnown RBP eCLIP13.06□□□□□ -0.32
COPS4-210ENST00000511708 EFNA5P52803 228 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 ATXN3P54252 364 aaPredicted RBP13.06□□□□□ -0.32
COPS4-210ENST00000511708 EVCP57679 992 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 OSTNP61366 133 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 PSMD2Q13200 908 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 MYBPC2Q14324 1141 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 CRY1Q16526 586 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 DUOXA1Q1HG43 343 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 LYSMD4Q5XG99 296 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 LARP1BQ659C4 914 aaKnown RBP13.06□□□□□ -0.32
COPS4-210ENST00000511708 APBB1IPQ7Z5R6 666 aaPredicted RBP13.06□□□□□ -0.32
COPS4-210ENST00000511708 TMEM150AQ86TG1 271 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 SCUBE3Q8IX30 993 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 TRIM22Q8IYM9 498 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 FRMD1Q8N878 549 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 PNPLA1Q8N8W4 532 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 CCDC26Q8TAB7 109 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 CEP76Q8TAP6 659 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 CAMK1GQ96NX5 476 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 LPIN3Q9BQK8 851 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 KIFC3Q9BVG8 833 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 GTPBP2Q9BX10 602 aaKnown RBP13.06□□□□□ -0.32
COPS4-210ENST00000511708 TDP1Q9NUW8 608 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 TIMM13Q9Y5L4 95 aaPredicted RBP13.06□□□□□ -0.32
COPS4-210ENST00000511708 MGAQ8IWI9 3026 aa13.06□□□□□ -0.32
COPS4-210ENST00000511708 ANAPC1Q9H1A4 1944 aa13.05□□□□□ -0.32
COPS4-210ENST00000511708 ANTXRLA6NF34 631 aa13.05□□□□□ -0.32
COPS4-210ENST00000511708 K7EQS6 105 aa13.05□□□□□ -0.32
COPS4-210ENST00000511708 ATXN7O15265 892 aaPredicted RBP13.05□□□□□ -0.32
COPS4-210ENST00000511708 SH3BP5O60239 455 aa13.05□□□□□ -0.32
COPS4-210ENST00000511708 BAG4O95429 457 aaKnown RBP13.05□□□□□ -0.32
COPS4-210ENST00000511708 LARGE1O95461 756 aa13.05□□□□□ -0.32
COPS4-210ENST00000511708 SPATA31C1P0DKV0 1188 aa13.05□□□□□ -0.32
COPS4-210ENST00000511708 ATF6P18850 670 aa13.05□□□□□ -0.32
COPS4-210ENST00000511708 PDIA3P30101 505 aaKnown RBP13.05□□□□□ -0.32
COPS4-210ENST00000511708 AVPR1AP37288 418 aa13.05□□□□□ -0.32
COPS4-210ENST00000511708 CCT2P78371 535 aaKnown RBP13.05□□□□□ -0.32
COPS4-210ENST00000511708 GFPT1Q06210 699 aaPredicted RBP13.05□□□□□ -0.32
COPS4-210ENST00000511708 SSRP1Q08945 709 aaKnown RBP13.05□□□□□ -0.32
COPS4-210ENST00000511708 SLC14A1Q13336 389 aa13.05□□□□□ -0.32
COPS4-210ENST00000511708 ZNF268Q14587 947 aaPredicted RBP13.05□□□□□ -0.32
COPS4-210ENST00000511708 MAP7D1Q3KQU3 841 aa13.05□□□□□ -0.32
COPS4-210ENST00000511708 TMEM92Q6UXU6 159 aa13.05□□□□□ -0.32
COPS4-210ENST00000511708 CPA6Q8N4T0 437 aa13.05□□□□□ -0.32
COPS4-210ENST00000511708 OR2I1PQ8NGU4 316 aa13.05□□□□□ -0.32
COPS4-210ENST00000511708 GCNAQ96QF7 691 aa13.05□□□□□ -0.32
COPS4-210ENST00000511708 PCDHA12Q9UN75 941 aa13.05□□□□□ -0.32
COPS4-210ENST00000511708 KCNJ14Q9UNX9 436 aa13.05□□□□□ -0.32
COPS4-210ENST00000511708 PTPN13Q12923 2485 aa13.04□□□□□ -0.32
COPS4-210ENST00000511708 ABLIM1O14639 778 aa13.04□□□□□ -0.32
COPS4-210ENST00000511708 CHRM1P11229 460 aaPredicted RBP13.04□□□□□ -0.32
COPS4-210ENST00000511708 CYP11B2P19099 503 aa13.04□□□□□ -0.32
COPS4-210ENST00000511708 DDX6P26196 483 aaKnown RBP eCLIP13.04□□□□□ -0.32
COPS4-210ENST00000511708 BFSP1Q12934 665 aa13.04□□□□□ -0.32
COPS4-210ENST00000511708 PPP2R5AQ15172 486 aa13.04□□□□□ -0.32
COPS4-210ENST00000511708 C2orf27AQ580R0 203 aa13.04□□□□□ -0.32
COPS4-210ENST00000511708 CC2D1AQ6P1N0 951 aaPredicted RBP13.04□□□□□ -0.32
COPS4-210ENST00000511708 TOGARAM2Q6ZUX3 1019 aa13.04□□□□□ -0.32
COPS4-210ENST00000511708 GLRX5Q86SX6 157 aa13.04□□□□□ -0.32
COPS4-210ENST00000511708 SLCO6A1Q86UG4 719 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms