RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 CYP4A22Q5TCH4 519 aa12.47□□□□□ -0.41
SH3RF1-205ENST00000511421 MTSS1LQ765P7 747 aa12.47□□□□□ -0.41
SH3RF1-205ENST00000511421 DNAJB7Q7Z6W7 309 aaPredicted RBP12.47□□□□□ -0.41
SH3RF1-205ENST00000511421 ADGRF2Q8IZF7 708 aa12.47□□□□□ -0.41
SH3RF1-205ENST00000511421 LEMD2Q8NC56 503 aa12.47□□□□□ -0.41
SH3RF1-205ENST00000511421 SPPL2BQ8TCT7 592 aa12.47□□□□□ -0.41
SH3RF1-205ENST00000511421 C2orf15Q8WU43 125 aaKnown RBP12.47□□□□□ -0.41
SH3RF1-205ENST00000511421 KBTBD7Q8WVZ9 684 aa12.47□□□□□ -0.41
SH3RF1-205ENST00000511421 CCDC34Q96HJ3 373 aa12.47□□□□□ -0.41
SH3RF1-205ENST00000511421 TIGD1Q96MW7 591 aa12.47□□□□□ -0.41
SH3RF1-205ENST00000511421 ASAH2Q9NR71 780 aa12.47□□□□□ -0.41
SH3RF1-205ENST00000511421 HCN4Q9Y3Q4 1203 aa12.47□□□□□ -0.41
SH3RF1-205ENST00000511421 R3HCC1Q9Y3T6 440 aaKnown RBP12.47□□□□□ -0.41
SH3RF1-205ENST00000511421 ARIH1Q9Y4X5 557 aaPredicted RBP12.47□□□□□ -0.41
SH3RF1-205ENST00000511421 ASB3Q9Y575 518 aa12.47□□□□□ -0.41
SH3RF1-205ENST00000511421 MUC6Q6W4X9 2439 aa12.47□□□□□ -0.41
SH3RF1-205ENST00000511421 STAU1O95793 577 aaKnown RBP12.46□□□□□ -0.41
SH3RF1-205ENST00000511421 C4BPAP04003 597 aaKnown RBP12.46□□□□□ -0.41
SH3RF1-205ENST00000511421 HAPLN1P10915 354 aaPredicted RBP12.46□□□□□ -0.41
SH3RF1-205ENST00000511421 SRFP11831 508 aa12.46□□□□□ -0.41
SH3RF1-205ENST00000511421 MYL4P12829 197 aa12.46□□□□□ -0.41
SH3RF1-205ENST00000511421 ATF6P18850 670 aa12.46□□□□□ -0.41
SH3RF1-205ENST00000511421 ACAT1P24752 427 aaKnown RBP12.46□□□□□ -0.41
SH3RF1-205ENST00000511421 LHX1P48742 406 aa12.46□□□□□ -0.41
SH3RF1-205ENST00000511421 MYL7Q01449 175 aa12.46□□□□□ -0.41
SH3RF1-205ENST00000511421 ZCWPW2Q504Y3 356 aa12.46□□□□□ -0.41
SH3RF1-205ENST00000511421 INTS6LQ5JSJ4 861 aaKnown RBP12.46□□□□□ -0.41
SH3RF1-205ENST00000511421 TDRD10Q5VZ19 366 aaKnown RBP12.46□□□□□ -0.41
SH3RF1-205ENST00000511421 SMYD4Q8IYR2 804 aaPredicted RBP12.46□□□□□ -0.41
SH3RF1-205ENST00000511421 SPATA20Q8TB22 786 aa12.46□□□□□ -0.41
SH3RF1-205ENST00000511421 SHKBP1Q8TBC3 707 aa12.46□□□□□ -0.41
SH3RF1-205ENST00000511421 PSMG2Q969U7 264 aa12.46□□□□□ -0.41
SH3RF1-205ENST00000511421 SEPT5Q99719 369 aaPredicted RBP12.46□□□□□ -0.41
SH3RF1-205ENST00000511421 XYLT2Q9H1B5 865 aa12.46□□□□□ -0.41
SH3RF1-205ENST00000511421 ZNF334Q9HCZ1 680 aaPredicted RBP12.46□□□□□ -0.41
SH3RF1-205ENST00000511421 WNT16Q9UBV4 365 aa12.46□□□□□ -0.41
SH3RF1-205ENST00000511421 MAPK13O15264 365 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 GJA1P17302 382 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 WARSP23381 471 aaKnown RBP12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 LMO2P25791 158 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 AP3M2P53677 418 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 VCPP55072 806 aaKnown RBP12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 MYL6P60660 151 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 DLG4P78352 724 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 NFE2Q16621 373 aaPredicted RBP12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 CCDC142Q17RM4 750 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 MGAT5BQ3V5L5 792 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 C1orf220Q5T0J3 134 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 FAM171BQ6P995 826 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 SUGP1Q8IWZ8 645 aaKnown RBP12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 TMC2Q8TDI7 906 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 ZSWIM3Q96MP5 696 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 KXD1Q9BQD3 176 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 LPIN3Q9BQK8 851 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 SLC2A4RGQ9NR83 387 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 ABI2Q9NYB9 513 aaPredicted RBP12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 PCDHB5Q9Y5E4 795 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 MYBPHLA2RUH7 354 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 GADD45BO75293 160 aaPredicted RBP12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 ECI2O75521 394 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 VNN1O95497 513 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 CFHP08603 1231 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 FAM163BP0C2L3 166 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 NPR3P17342 541 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 FCARP24071 287 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 NR2F2P24468 414 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 PCSK1P29120 753 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 AVPR2P30518 371 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 ATICP31939 592 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 GPC5P78333 572 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 TRPC3Q13507 836 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 TEAD2Q15562 447 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 FAM78AQ5JUQ0 283 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 IER5LQ5T953 404 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 CEP135Q66GS9 1140 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 TANGO2Q6ICL3 276 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 GAREM2Q75VX8 874 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 ELOA2Q8IYF1 753 aaPredicted RBP12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 GPR152Q8TDT2 470 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 ERCC4Q92889 916 aaPredicted RBP12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 GSDMAQ96QA5 445 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 MMS19Q96T76 1030 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 MRPL45Q9BRJ2 306 aaKnown RBP12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 PI4K2AQ9BTU6 479 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 PLA2G2FQ9BZM2 168 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 VRTNQ9H8Y1 702 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 GTF3C4Q9UKN8 822 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 FBXL21Q9UKT6 434 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 FRMD4BQ9Y2L6 1034 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 NME7Q9Y5B8 376 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 PCDHA5Q9Y5H7 936 aa12.45□□□□□ -0.42
SH3RF1-205ENST00000511421 A0A1W2PRU2 124 aa12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 KRBA1A5PL33 1030 aa12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 ATP2C2O75185 946 aa12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 TACC1O75410 805 aa12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 AKAP3O75969 853 aa12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 PRCPP42785 496 aa12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 GPR15P49685 360 aa12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 MCCD1P59942 119 aaPredicted RBP12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 WDR72Q3MJ13 1102 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms