RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 PRSS36Q5K4E3 855 aa12.6□□□□□ -0.39
HMGXB3-203ENST00000510472 TRIML1Q8N9V2 468 aa12.6□□□□□ -0.39
HMGXB3-203ENST00000510472 ITFG1Q8TB96 612 aa12.6□□□□□ -0.39
HMGXB3-203ENST00000510472 C2orf15Q8WU43 125 aaKnown RBP12.6□□□□□ -0.39
HMGXB3-203ENST00000510472 SYAP1Q96A49 352 aaPredicted RBP12.6□□□□□ -0.39
HMGXB3-203ENST00000510472 ACSF2Q96CM8 615 aaPredicted RBP12.6□□□□□ -0.39
HMGXB3-203ENST00000510472 DDX43Q9NXZ2 648 aaKnown RBP12.6□□□□□ -0.39
HMGXB3-203ENST00000510472 SLC27A5Q9Y2P5 690 aa12.6□□□□□ -0.39
HMGXB3-203ENST00000510472 YIPF1Q9Y548 306 aa12.6□□□□□ -0.39
HMGXB3-203ENST00000510472 MYBPHLA2RUH7 354 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 ANHXE9PGG2 379 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 BIN1O00499 593 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 PSMA7O14818 248 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 SLC16A3O15427 465 aaKnown RBP12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 PHACTR2O75167 634 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 MOSPD3O75425 235 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 MICAL2O94851 1124 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 ASS1P00966 412 aaKnown RBP12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 LRG1P02750 347 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 HAPLN1P10915 354 aaPredicted RBP12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 PCSK1P29120 753 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 GTF2H1P32780 548 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 CCR2P41597 374 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 TUFMP49411 452 aaKnown RBP12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 PTPN21Q16825 1174 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 SLC5A9Q2M3M2 681 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 SGSM1Q2NKQ1 1148 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 PABPC1LQ4VXU2 614 aaKnown RBP12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 INTS6LQ5JSJ4 861 aaKnown RBP12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 DCP1BQ8IZD4 617 aaKnown RBP12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 SPPL2BQ8TCT7 592 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 TAF4BQ92750 862 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 EDAQ92838 391 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 FGF13Q92913 245 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 MED15Q96RN5 788 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 MRPL45Q9BRJ2 306 aaKnown RBP12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 CLSTN2Q9H4D0 955 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 ABCB6Q9NP58 842 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 GTF3C4Q9UKN8 822 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 CDH7Q9ULB5 785 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 POLIQ9UNA4 740 aa12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 R3HCC1Q9Y3T6 440 aaKnown RBP12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 ZFP37Q9Y6Q3 630 aaPredicted RBP12.59□□□□□ -0.39
HMGXB3-203ENST00000510472 MTCL1Q9Y4B5 1905 aaKnown RBP12.58□□□□□ -0.39
HMGXB3-203ENST00000510472 GPR37L1O60883 481 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 ATP2C2O75185 946 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 ASGR2P07307 311 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 TRIM49P0CI25 452 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 TRIM49CP0CI26 452 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 EPB41P11171 864 aaKnown RBP12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 KRT13P13646 458 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 ATF6P18850 670 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 ACAT1P24752 427 aaKnown RBP12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 GNL1P36915 607 aaPredicted RBP12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 GCLMP48507 274 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 ZXDAP98168 799 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 MYL7Q01449 175 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 TSPY1Q01534 308 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 BIRC3Q13489 604 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 STIM1Q13586 685 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 NFE2Q16621 373 aaPredicted RBP12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 CCDC142Q17RM4 750 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 FILIP1Q7Z7B0 1213 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 TMC8Q8IU68 726 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 NPAS3Q8IXF0 933 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 HS6ST3Q8IZP7 471 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 TAS1R2Q8TE23 839 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 NELFBQ8WX92 580 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 ELMO3Q96BJ8 720 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 ZNF512Q96ME7 567 aaPredicted RBP12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 CEP63Q96MT8 703 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 MMS19Q96T76 1030 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 TSG101Q99816 390 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 CORO1BQ9BR76 489 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 C1QTNF1Q9BXJ1 281 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 SDCBP2Q9H190 292 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 KCNK12Q9HB15 430 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 TMEM8AQ9HCN3 771 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 CRTAC1Q9NQ79 661 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 RAPGEFL1Q9UHV5 662 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 CDH9Q9ULB4 789 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 ASB3Q9Y575 518 aa12.58□□□□□ -0.4
HMGXB3-203ENST00000510472 LRRN2O75325 713 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 SOAT2O75908 522 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 HLA-DRAP01903 254 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 PDGFRBP09619 1106 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 GBP2P32456 591 aaPredicted RBP12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 ALDH1A3P47895 512 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 CDR1P51861 262 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 EPHB3P54753 998 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 CDH8P55286 799 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 PLD1Q13393 1074 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 ZNF699Q32M78 642 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 CFAP221Q4G0U5 840 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 ZNF667Q5HYK9 610 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 GET4Q7L5D6 327 aaPredicted RBP12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 DNAJB7Q7Z6W7 309 aaPredicted RBP12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 LEMD2Q8NC56 503 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 SEMA4DQ92854 862 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 PSMG2Q969U7 264 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms