RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 RHOP08100 348 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 DRD4P21917 467 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 LPOP22079 712 aaPredicted RBP3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 NPTX2P47972 431 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 EPHB1P54762 984 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 AMPD3Q01432 767 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 TLE1Q04724 770 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 PPP2R5AQ15172 486 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 PREPLQ4J6C6 727 aaPredicted RBP3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 MORN5Q5VZ52 161 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 RNF219Q5W0B1 726 aaPredicted RBP3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 SLC9A4Q6AI14 798 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 ZNF66Q6ZN08 573 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 RSPH3Q86UC2 560 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 CBARPQ8N350 705 aaPredicted RBP3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 PPM1NQ8N819 430 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 B3GALNT2Q8NCR0 500 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 PNISRQ8TF01 805 aaKnown RBP3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 PACSIN1Q9BY11 444 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 BHMT2Q9H2M3 363 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 PRDM16Q9HAZ2 1276 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 NRIP3Q9NQ35 241 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 LIMCH1Q9UPQ0 1083 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 H3BNC9 293 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 HTRA2O43464 458 aaPredicted RBP3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 NDUFS2O75306 463 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 ANXA1P04083 346 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 MYL1P05976 194 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 C5AR1P21730 350 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 MPGP29372 298 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 RHBDL3P58872 404 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 SETQ01105 290 aaPredicted RBP3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 PIGFQ07326 219 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 RAPGEF1Q13905 1077 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 RAB39AQ14964 217 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 C3orf36Q3SXR2 165 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 SUPT20HL1Q3ZLR7 823 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 TAPT1Q6NXT6 567 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 MIGA2Q7L4E1 593 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 YTHDF3Q7Z739 585 aaKnown RBP3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 NEK8Q86SG6 692 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 FAM109AQ8N4B1 249 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 SLC17A8Q8NDX2 589 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 ADAMTS15Q8TE58 950 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 DENND1AQ8TEH3 1009 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 FBXO41Q8TF61 875 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 JADE3Q92613 823 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 PMM1Q92871 262 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 REPS1Q96D71 796 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 TRIB1Q96RU8 372 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 RPS6KC1Q96S38 1066 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 OSBPL9Q96SU4 736 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 NAP1L4Q99733 375 aaKnown RBP3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 ALG8Q9BVK2 526 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 IMPG2Q9BZV3 1241 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 SEMA4CQ9C0C4 833 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 ANLNQ9NQW6 1124 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 ETAA1Q9NY74 926 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 GABBR1Q9UBS5 961 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 PADI4Q9UM07 663 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 PCDHB1Q9Y5F3 818 aa3.01□□□□□ -1.93
DEPDC1B-204ENST00000509006 CCDC187A0A096LP49 1063 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 A0A0B4J269 797 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 GOLGA6CA6NDK9 693 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 GOLGA6BA6NDN3 693 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 PRSS29PA6NIE9 313 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 TARM1B6A8C7 271 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 TTLL1O95922 423 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 NHLRC4P0CG21 123 aaPredicted RBP3□□□□□ -1.93
DEPDC1B-204ENST00000509006 GOLGA6DP0CG33 693 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 U2AF1L5P0DN76 240 aaPredicted RBP3□□□□□ -1.93
DEPDC1B-204ENST00000509006 TOB1P50616 345 aaPredicted RBP3□□□□□ -1.93
DEPDC1B-204ENST00000509006 CCT8P50990 548 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 POLGP54098 1239 aaPredicted RBP3□□□□□ -1.93
DEPDC1B-204ENST00000509006 U2AF1Q01081 240 aaKnown RBP eCLIP3□□□□□ -1.93
DEPDC1B-204ENST00000509006 TUBB3Q13509 450 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 IL10RAQ13651 578 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 PROSER3Q2NL68 480 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 ZNF260Q3ZCT1 412 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 FAM153CQ494X1 144 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 SLC44A4Q53GD3 710 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 PPP4R4Q6NUP7 873 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 PDSS2Q86YH6 399 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 WDR75Q8IWA0 830 aaKnown RBP3□□□□□ -1.93
DEPDC1B-204ENST00000509006 CAMKK1Q8N5S9 505 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 SAMD3Q8N6K7 520 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 HDAC10Q969S8 669 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 SH2D3AQ9BRG2 576 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 AMBRA1Q9C0C7 1298 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 SPRTNQ9H040 489 aaPredicted RBP3□□□□□ -1.93
DEPDC1B-204ENST00000509006 SERTAD4Q9NUC0 356 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 MRPS18AQ9NVS2 196 aaKnown RBP3□□□□□ -1.93
DEPDC1B-204ENST00000509006 GOLGA6AQ9NYA3 693 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 ELOVL5Q9NYP7 299 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 CALCOCO1Q9P1Z2 691 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 DKK3Q9UBP4 350 aa3□□□□□ -1.93
DEPDC1B-204ENST00000509006 SAP30BPQ9UHR5 308 aaKnown RBP3□□□□□ -1.93
DEPDC1B-204ENST00000509006 ATP8A1Q9Y2Q0 1164 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms