RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 ZNF200P98182 395 aaPredicted RBP23.51■■□□□ 1.35
RNF4-207ENST00000506706 INCA1Q0VD86 236 aa23.51■■□□□ 1.35
RNF4-207ENST00000506706 SNX17Q15036 470 aa23.51■■□□□ 1.35
RNF4-207ENST00000506706 PTPN20Q4JDL3 420 aa23.51■■□□□ 1.35
RNF4-207ENST00000506706 SGO2Q562F6 1265 aa23.51■■□□□ 1.35
RNF4-207ENST00000506706 CYP4A22Q5TCH4 519 aa23.51■■□□□ 1.35
RNF4-207ENST00000506706 CCDC50Q8IVM0 306 aa23.51■■□□□ 1.35
RNF4-207ENST00000506706 VDRP11473 427 aa23.5■■□□□ 1.35
RNF4-207ENST00000506706 GNAT1P11488 350 aa23.5■■□□□ 1.35
RNF4-207ENST00000506706 DMTNQ08495 405 aa23.5■■□□□ 1.35
RNF4-207ENST00000506706 LLGL1Q15334 1064 aa23.5■■□□□ 1.35
RNF4-207ENST00000506706 EXD1Q8NHP7 514 aa23.5■■□□□ 1.35
RNF4-207ENST00000506706 EXOC4Q96A65 974 aa23.5■■□□□ 1.35
RNF4-207ENST00000506706 HEXIM2Q96MH2 286 aaKnown RBP23.5■■□□□ 1.35
RNF4-207ENST00000506706 GOLGA8KD6RF30 607 aa23.5■■□□□ 1.35
RNF4-207ENST00000506706 O00370 1275 aa23.5■■□□□ 1.35
RNF4-207ENST00000506706 GBP1P32455 592 aa23.5■■□□□ 1.35
RNF4-207ENST00000506706 PURAQ00577 322 aaKnown RBP23.5■■□□□ 1.35
RNF4-207ENST00000506706 PIGHQ14442 188 aaPredicted RBP23.5■■□□□ 1.35
RNF4-207ENST00000506706 C7orf31Q8N865 590 aa23.5■■□□□ 1.35
RNF4-207ENST00000506706 PIK3R5Q8WYR1 880 aa23.5■■□□□ 1.35
RNF4-207ENST00000506706 ZMAT2Q96NC0 199 aaKnown RBP23.5■■□□□ 1.35
RNF4-207ENST00000506706 CYTH4Q9UIA0 394 aa23.5■■□□□ 1.35
RNF4-207ENST00000506706 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.5■■□□□ 1.356e-6■■■■■ 55.1
RNF4-207ENST00000506706 TLL2Q9Y6L7 1015 aa23.5■■□□□ 1.35
RNF4-207ENST00000506706 PASKQ96RG2 1323 aa23.49■■□□□ 1.35
RNF4-207ENST00000506706 TRIP11Q15643 1979 aa23.49■■□□□ 1.35
RNF4-207ENST00000506706 MICAL2O94851 1124 aa23.49■■□□□ 1.35
RNF4-207ENST00000506706 ZNF252P-AS1Q0IIN9 211 aa23.49■■□□□ 1.35
RNF4-207ENST00000506706 CNGA2Q16280 664 aa23.49■■□□□ 1.35
RNF4-207ENST00000506706 NME8Q8N427 588 aa23.49■■□□□ 1.35
RNF4-207ENST00000506706 BEST2Q8NFU1 509 aa23.49■■□□□ 1.35
RNF4-207ENST00000506706 TMEM40Q8WWA1 233 aa23.49■■□□□ 1.35
RNF4-207ENST00000506706 CXCL16Q9H2A7 254 aa23.49■■□□□ 1.35
RNF4-207ENST00000506706 FAM204AQ9H8W3 233 aa23.49■■□□□ 1.35
RNF4-207ENST00000506706 WDR35Q9P2L0 1181 aa23.49■■□□□ 1.35
RNF4-207ENST00000506706 PIN4Q9Y237 131 aaKnown RBP23.49■■□□□ 1.35
RNF4-207ENST00000506706 SNX24Q9Y343 169 aa23.49■■□□□ 1.35
RNF4-207ENST00000506706 HES2Q9Y543 173 aa23.49■■□□□ 1.35
RNF4-207ENST00000506706 GJC1P36383 396 aa23.48■■□□□ 1.35
RNF4-207ENST00000506706 NDST1P52848 882 aa23.48■■□□□ 1.35
RNF4-207ENST00000506706 ZBTB6Q15916 424 aa23.48■■□□□ 1.35
RNF4-207ENST00000506706 FMO2Q99518 471 aa23.48■■□□□ 1.35
RNF4-207ENST00000506706 CNTN3Q9P232 1028 aa23.48■■□□□ 1.35
RNF4-207ENST00000506706 KIAA1257Q9ULG3 409 aa23.48■■□□□ 1.35
RNF4-207ENST00000506706 TRIP12Q14669 1992 aaPredicted RBP23.48■■□□□ 1.35
RNF4-207ENST00000506706 DUSP11O75319 330 aaKnown RBP23.48■■□□□ 1.35
RNF4-207ENST00000506706 HMGCRP04035 888 aa23.48■■□□□ 1.35
RNF4-207ENST00000506706 CTGFP29279 349 aa23.48■■□□□ 1.35
RNF4-207ENST00000506706 CETN2P41208 172 aa23.48■■□□□ 1.35
RNF4-207ENST00000506706 CRYBB1P53674 252 aaPredicted RBP23.48■■□□□ 1.35
RNF4-207ENST00000506706 GSCP56915 257 aaPredicted RBP23.48■■□□□ 1.35
RNF4-207ENST00000506706 MTMR3Q13615 1198 aa23.48■■□□□ 1.35
RNF4-207ENST00000506706 LRRC38Q5VT99 294 aa23.48■■□□□ 1.35
RNF4-207ENST00000506706 ALKAL1Q6UXT8 129 aa23.48■■□□□ 1.35
RNF4-207ENST00000506706 NIPA2Q8N8Q9 360 aa23.48■■□□□ 1.35
RNF4-207ENST00000506706 C1orf54Q8WWF1 131 aa23.48■■□□□ 1.35
RNF4-207ENST00000506706 SLCO2A1Q92959 643 aa23.48■■□□□ 1.35
RNF4-207ENST00000506706 NXF3Q9H4D5 531 aaKnown RBP23.48■■□□□ 1.35
RNF4-207ENST00000506706 SYNCQ9H7C4 482 aa23.48■■□□□ 1.35
RNF4-207ENST00000506706 SIGLEC16A6NMB1 481 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 M0QYV0 167 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 KPNA6O60684 536 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 RECQL4O94761 1208 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 ECEL1O95672 775 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 RALAP11233 206 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 HOXC8P31273 242 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 FLT3P36888 993 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 HSD17B3P37058 310 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 KCNJ1P48048 391 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 PSMC1P62191 440 aaKnown RBP23.47■■□□□ 1.35
RNF4-207ENST00000506706 OGDHQ02218 1023 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 ZNF771Q7L3S4 317 aaPredicted RBP23.47■■□□□ 1.35
RNF4-207ENST00000506706 HERPUD2Q9BSE4 406 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 NT5C1AQ9BXI3 368 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 HOMER3Q9NSC5 361 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 ZDHHC18Q9NUE0 388 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 PSD3Q9NYI0 1048 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 PARP2Q9UGN5 583 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 F8VP50 259 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 GOLGA8SH3BPF8 625 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 KRT3P12035 628 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 TM4SF4P48230 202 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 TMC3Q7Z5M5 1100 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 RCOR2Q8IZ40 523 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 LRRC52Q8N7C0 313 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 RBM41Q96IZ5 413 aaKnown RBP23.47■■□□□ 1.35
RNF4-207ENST00000506706 CPXM1Q96SM3 734 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 APOL6Q9BWW8 343 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 OSBPL8Q9BZF1 889 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.47■■□□□ 1.35
RNF4-207ENST00000506706 TUBGCP4Q9UGJ1 667 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 PTPN22Q9Y2R2 807 aa23.47■■□□□ 1.35
RNF4-207ENST00000506706 GOLGA6CA6NDK9 693 aa23.46■■□□□ 1.35
RNF4-207ENST00000506706 CA12O43570 354 aa23.46■■□□□ 1.35
RNF4-207ENST00000506706 C6orf222P0C671 652 aaPredicted RBP23.46■■□□□ 1.35
RNF4-207ENST00000506706 GOLGA6DP0CG33 693 aa23.46■■□□□ 1.35
RNF4-207ENST00000506706 KLF1Q13351 362 aaPredicted RBP23.46■■□□□ 1.35
RNF4-207ENST00000506706 ZNF268Q14587 947 aaPredicted RBP23.46■■□□□ 1.35
RNF4-207ENST00000506706 TRPV1Q8NER1 839 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms