RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 TRADDQ15628 312 aa18.28■□□□□ 0.52
TRAPPC11-204ENST00000505676 RGMBQ6NW40 437 aa18.28■□□□□ 0.52
TRAPPC11-204ENST00000505676 DDX42Q86XP3 938 aaKnown RBP eCLIP18.28■□□□□ 0.52
TRAPPC11-204ENST00000505676 SLC4A11Q8NBS3 891 aa18.28■□□□□ 0.52
TRAPPC11-204ENST00000505676 ATL2Q8NHH9 583 aa18.28■□□□□ 0.52
TRAPPC11-204ENST00000505676 KAT2BQ92831 832 aa18.28■□□□□ 0.52
TRAPPC11-204ENST00000505676 SNX27Q96L92 541 aa18.28■□□□□ 0.52
TRAPPC11-204ENST00000505676 FRMD8P1Q9BZ68 369 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC11-204ENST00000505676 TXLNGYQ9BZA5 131 aa18.28■□□□□ 0.52
TRAPPC11-204ENST00000505676 PLEKHA4Q9H4M7 779 aa18.28■□□□□ 0.52
TRAPPC11-204ENST00000505676 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.28■□□□□ 0.52
TRAPPC11-204ENST00000505676 PLAAQ9Y263 795 aa18.28■□□□□ 0.52
TRAPPC11-204ENST00000505676 IGF2BP3O00425 579 aaKnown RBP eCLIP18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 MEFVO15553 781 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 IGHA2P01877 340 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 GABRB2P47870 512 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 CALCOCO2Q13137 446 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 ZNF394Q53GI3 561 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 TTC27Q6P3X3 843 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 DRICH1Q6PGQ1 229 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 WDTC1Q8N5D0 677 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 IPO4Q8TEX9 1081 aaKnown RBP18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 OSBPL8Q9BZF1 889 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 TRIM7Q9C029 511 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 FAM170AA1A519 330 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 RPS6KA5O75582 802 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 SETSIPP0DME0 302 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 LMAN1P49257 510 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 PTK6Q13882 451 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 PPP1R7Q15435 360 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 KIZQ2M2Z5 673 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 ODF2Q5BJF6 829 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 LEKR1Q6ZMV7 388 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 IFNL1Q8IU54 200 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 CCDC50Q8IVM0 306 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 ZDHHC14Q8IZN3 488 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 MCEEQ96PE7 176 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 DCLK3Q9C098 648 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 NEUROG2Q9H2A3 272 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 SMYD3Q9H7B4 428 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 CNTN3Q9P232 1028 aa18.27■□□□□ 0.52
TRAPPC11-204ENST00000505676 ADCY6O43306 1168 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 TJP3O95049 919 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 NPTXRO95502 500 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 CD4P01730 458 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 KRT7P08729 469 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 SLC10A3P09131 477 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 MYZAPP0CAP1 466 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 ITIH2P19823 946 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 HOXA11P31270 313 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 DHX9Q08211 1270 aaKnown RBP18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 HADHQ16836 314 aaKnown RBP18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 DENND1BQ6P3S1 775 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 ARFGAP2Q8N6H7 521 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 RIN2Q8WYP3 895 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 NT5C1AQ9BXI3 368 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 SDCBP2Q9H190 292 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 GRHL1Q9NZI5 618 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 NUDT17P0C025 328 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 KRT3P12035 628 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 SKOR1P84550 965 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 NFX1Q12986 1120 aaKnown RBP18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 UNC93AQ86WB7 457 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 CPNE8Q86YQ8 564 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 ART4Q93070 314 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 ATP6V1G3Q96LB4 118 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 PPP1R16BQ96T49 567 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 NCAPGQ9BPX3 1015 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 FOXP3Q9BZS1 431 aa18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 UBQLN1Q9UMX0 589 aaKnown RBP18.26■□□□□ 0.51
TRAPPC11-204ENST00000505676 CSDE1O75534 798 aaKnown RBP18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 AKR1A1P14550 325 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 HOXC8P31273 242 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 PNPLA4P41247 253 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 TAS2R40P59535 323 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 ZBTB6Q15916 424 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 PTPN20Q4JDL3 420 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 AGBL2Q5U5Z8 902 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 SCARA3Q6AZY7 606 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 TAF2Q6P1X5 1199 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 LCLAT1Q6UWP7 414 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 ZDHHC24Q6UX98 284 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 HOOK3Q86VS8 718 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 CCDC89Q8N998 374 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 UBLCP1Q8WVY7 318 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 TRIM6Q9C030 488 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 ELOVL4Q9GZR5 314 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 FAM49AQ9H0Q0 323 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 SYNCQ9H7C4 482 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 SNX24Q9Y343 169 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 C17orf102A2RUQ5 167 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 H0YGN5 161 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 O00370 1275 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 SHOX2O60902 331 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 MICAL2O94851 1124 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 RALAP11233 206 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 SSR1P43307 286 aaKnown RBP18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 CRYBB1P53674 252 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 RPL7AP62424 266 aaKnown RBP18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 C2CD6Q53TS8 623 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms