RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 SLC16A4O15374 487 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 ADRB2P07550 413 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 OR4Q2P0C623 313 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 PXNP49023 591 aaPredicted RBP10.72□□□□□ -0.69
NEDD9-210ENST00000505589 LIG4P49917 911 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 DGKEP52429 567 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 HMGN5P82970 282 aaKnown RBP10.72□□□□□ -0.69
NEDD9-210ENST00000505589 ZNF252P-AS1Q0IIN9 211 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 CCDC6Q16204 474 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 ECM1Q16610 540 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 SPDYCQ5MJ68 293 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 STXBP5Q5T5C0 1151 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 SH3PXD2AQ5TCZ1 1133 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 TAS1R3Q7RTX0 852 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 GPIHBP1Q8IV16 184 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 NECAB1Q8N987 351 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 TMEM161BQ8NDZ6 487 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 CD101Q93033 1021 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 ATP2A3Q93084 1043 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 ZBTB45Q96K62 511 aaPredicted RBP10.72□□□□□ -0.69
NEDD9-210ENST00000505589 LRRC3BQ96PB8 259 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 ADAM33Q9BZ11 813 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 EBF3Q9H4W6 596 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 ASB7Q9H672 318 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 CNOT1A5YKK6 2376 aaKnown RBP10.72□□□□□ -0.69
NEDD9-210ENST00000505589 CACNA1GO43497 2377 aa10.72□□□□□ -0.69
NEDD9-210ENST00000505589 SFI1A8K8P3 1242 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 LACTBL1A8MY62 500 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 E9PMD0 336 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 WNT7AO00755 349 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 CITO14578 2027 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 OGTO15294 1046 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 LARGE1O95461 756 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 CXCL8P10145 99 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 MAPTP10636 758 aaKnown RBP10.71□□□□□ -0.69
NEDD9-210ENST00000505589 PRPHP41219 470 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 RPL10AP62906 217 aaKnown RBP10.71□□□□□ -0.69
NEDD9-210ENST00000505589 TSPY1Q01534 308 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 FAM160A1Q05DH4 1040 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 FOXC1Q12948 553 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 PSMD2Q13200 908 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 COL9A2Q14055 689 aaPredicted RBP10.71□□□□□ -0.69
NEDD9-210ENST00000505589 HNRNPDQ14103 355 aaKnown RBP10.71□□□□□ -0.69
NEDD9-210ENST00000505589 DMC1Q14565 340 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 PDCD11Q14690 1871 aaKnown RBP10.71□□□□□ -0.69
NEDD9-210ENST00000505589 SLC39A12Q504Y0 691 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 FSTL4Q6MZW2 842 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 MON1AQ86VX9 555 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 NT5DC4Q86YG4 428 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 MAB21L3Q8N8X9 362 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 SYT2Q8N9I0 419 aaPredicted RBP10.71□□□□□ -0.69
NEDD9-210ENST00000505589 FAM184AQ8NB25 1140 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 TSTD1Q8NFU3 115 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 RPLP0P6Q8NHW5 317 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 OSCP1Q8WVF1 389 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 CDK5RAP3Q96JB5 506 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 ZCWPW1Q9H0M4 648 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 CRISPLD1Q9H336 500 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 ECT2Q9H8V3 914 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 C2orf42Q9NWW7 574 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 TUBGCP4Q9UGJ1 667 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 TBX20Q9UMR3 447 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 PCDHB5Q9Y5E4 795 aa10.71□□□□□ -0.69
NEDD9-210ENST00000505589 NCANO14594 1321 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 C1QTNF9BB2RNN3 333 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 PIRO00625 290 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 CYB561D2O14569 222 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 HNRNPDLO14979 420 aaKnown RBP10.7□□□□□ -0.7
NEDD9-210ENST00000505589 SLC26A4O43511 780 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 VNN2O95498 520 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 EGFP01133 1207 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 F11P03951 625 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 USP17L7P0C7H9 530 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 C1QTNF9P0C862 333 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 HAPLN1P10915 354 aaPredicted RBP10.7□□□□□ -0.7
NEDD9-210ENST00000505589 PFKLP17858 780 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 GJA4P35212 333 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 PNPLA4P41247 253 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 IFNAR2P48551 515 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 TAF6P49848 677 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 NLRP12P59046 1061 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 CYP4F8P98187 520 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 HSF5Q4G112 596 aaPredicted RBP10.7□□□□□ -0.7
NEDD9-210ENST00000505589 PREPLQ4J6C6 727 aaPredicted RBP10.7□□□□□ -0.7
NEDD9-210ENST00000505589 WDR44Q5JSH3 913 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 C9orf57Q5W0N0 161 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 SLFN12LQ6IEE8 588 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 LRSAM1Q6UWE0 723 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 NUDT18Q6ZVK8 323 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 DAW1Q8N136 415 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 C4orf32Q8N8J7 132 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 KIAA1958Q8N8K9 716 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 FBXO18Q8NFZ0 1043 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 FAM212AQ96EL1 285 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 SPACA7Q96KW9 195 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 HPS4Q9NQG7 708 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 DUS2Q9NX74 493 aaKnown RBP10.7□□□□□ -0.7
NEDD9-210ENST00000505589 EHD2Q9NZN4 543 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 EVLQ9UI08 416 aaPredicted RBP10.7□□□□□ -0.7
NEDD9-210ENST00000505589 ODF2LQ9ULJ1 636 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms