RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 ARHGEF3Q9NR81 526 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 LAMP5Q9UJQ1 280 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 RCOR1Q9UKL0 485 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 MAN1B1Q9UKM7 699 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 PACSIN2Q9UNF0 486 aaPredicted RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 KIAA1024Q9UPX6 916 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 CHMP2BQ9UQN3 213 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 CLEC11AQ9Y240 323 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 RABGAP1Q9Y3P9 1069 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 CACNG2Q9Y698 323 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ADAMTSL1Q8N6G6 1762 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 BRWD1Q9NSI6 2320 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 SNED1Q8TER0 1413 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 I3L4J1 428 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 PEX11AO75192 247 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 PCCAP05165 728 aaPredicted RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 GHRP10912 638 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 NCAM1P13591 858 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 RAC2P15153 192 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ATP5DP30049 168 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 CSTF2P33240 577 aaKnown RBP eCLIP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ALDH1A3P47895 512 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 RASSF2P50749 326 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 YWHAGP61981 247 aaKnown RBP eCLIP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 BASP1P80723 227 aaKnown RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 TBX2Q13207 712 aaPredicted RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ITGB3BPQ13352 177 aaPredicted RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 MTM1Q13496 603 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 MTMR3Q13615 1198 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 TUBB2AQ13885 445 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 TMEM95Q3KNT9 176 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 TRAF7Q6Q0C0 670 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 FAM124AQ86V42 546 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 CAND1Q86VP6 1230 aaKnown RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 HACE1Q8IYU2 909 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ZBED8Q8IZ13 594 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 PHTF2Q8N3S3 785 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 METTL25Q8N6Q8 603 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 PDCD7Q8N8D1 485 aaKnown RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ZUFSPQ96AP4 578 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 HAUS1Q96CS2 278 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 CFAP57Q96MR6 1250 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 CCT8L2Q96SF2 557 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 TUBB2BQ9BVA1 445 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 DSCC1Q9BVC3 393 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 NTN4Q9HB63 628 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 NCKIPSDQ9NZQ3 722 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 SLC7A8Q9UHI5 535 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 RWDD3Q9Y3V2 267 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 RIPK3Q9Y572 518 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 WDR90Q96KV7 1748 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 MYH3P11055 1940 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 USP42Q9H9J4 1324 aaKnown RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 SRCAPQ6ZRS2 3230 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 LRRD1A4D1F6 860 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 A6NCN8 305 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 OR5K3A6NET4 321 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ERVV-1B6SEH8 477 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 SLC9A3R1O14745 358 aaPredicted RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 CFLARO15519 480 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 HOXA2O43364 376 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 TLR2O60603 784 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 GMNNO75496 209 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 MAP3K6O95382 1288 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 FAM107AO95990 144 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ACADSP16219 412 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 PRKCAP17252 672 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 GABRB3P28472 473 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 KPNA1P52294 538 aaPredicted RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 SNX16P57768 344 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 CTBSQ01459 385 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 APBA1Q02410 837 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 C1QBPQ07021 282 aaKnown RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 GRM2Q14416 872 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 EFTUD2Q15029 972 aaKnown RBP eCLIP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 LRRC14Q15048 493 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ADRM1Q16186 407 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 PDCD4Q53EL6 469 aaKnown RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 LIN9Q5TKA1 542 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 TPGS2Q68CL5 300 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 HAUS3Q68CZ6 603 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 OR7E24Q6IFN5 339 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 PRR5LQ6MZQ0 368 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 C1orf228Q6PIY5 440 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 CEP128Q6ZU80 1094 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 KRT26Q7Z3Y9 468 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 TMC7Q7Z402 723 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 GALNT13Q8IUC8 556 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ELMOD1Q8N336 334 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 SH2D3CQ8N5H7 860 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 GALNT6Q8NCL4 622 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 RNF169Q8NCN4 708 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 CCDC197Q8NCU1 140 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 OR7D4Q8NG98 312 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 C7orf43Q8WVR3 580 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 SLC7A3Q8WY07 619 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 JDP2Q8WYK2 163 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 COA7Q96BR5 231 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 EYA3Q99504 573 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 HERC2P3Q9BVR0 1158 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms