RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 LMO2P25791 158 aa26.87■■□□□ 1.89
LSM6-202ENST00000502781 PCSK1P29120 753 aa26.87■■□□□ 1.89
LSM6-202ENST00000502781 HOXA9P31269 272 aa26.87■■□□□ 1.89
LSM6-202ENST00000502781 SMARCB1Q12824 385 aa26.87■■□□□ 1.89
LSM6-202ENST00000502781 INTS6LQ5JSJ4 861 aaKnown RBP26.87■■□□□ 1.89
LSM6-202ENST00000502781 FEZF2Q8TBJ5 459 aa26.87■■□□□ 1.89
LSM6-202ENST00000502781 ZNF707Q96C28 371 aaPredicted RBP26.87■■□□□ 1.89
LSM6-202ENST00000502781 NIF3L1Q9GZT8 377 aa26.87■■□□□ 1.89
LSM6-202ENST00000502781 SDCBP2Q9H190 292 aa26.87■■□□□ 1.89
LSM6-202ENST00000502781 SYCE3A1L190 88 aa26.86■■□□□ 1.89
LSM6-202ENST00000502781 MTMR11A4FU01 709 aa26.86■■□□□ 1.89
LSM6-202ENST00000502781 POU2F2P09086 479 aa26.86■■□□□ 1.89
LSM6-202ENST00000502781 KCNQ1P51787 676 aa26.86■■□□□ 1.89
LSM6-202ENST00000502781 ADCY1Q08828 1119 aa26.86■■□□□ 1.89
LSM6-202ENST00000502781 RARS2Q5T160 578 aaKnown RBP26.86■■□□□ 1.89
LSM6-202ENST00000502781 LIN9Q5TKA1 542 aa26.86■■□□□ 1.89
LSM6-202ENST00000502781 CDKAL1Q5VV42 579 aa26.86■■□□□ 1.89
LSM6-202ENST00000502781 PTCRAQ6ISU1 281 aaPredicted RBP26.86■■□□□ 1.89
LSM6-202ENST00000502781 CCDC149Q6ZUS6 474 aa26.86■■□□□ 1.89
LSM6-202ENST00000502781 GPR149Q86SP6 731 aa26.86■■□□□ 1.89
LSM6-202ENST00000502781 CCDC150Q8NCX0 1101 aa26.86■■□□□ 1.89
LSM6-202ENST00000502781 LMO3Q8TAP4 145 aa26.86■■□□□ 1.89
LSM6-202ENST00000502781 SLC7A14Q8TBB6 771 aa26.86■■□□□ 1.89
LSM6-202ENST00000502781 HSFX1Q9UBD0 423 aa26.86■■□□□ 1.89
LSM6-202ENST00000502781 HNRNPA1P09651 372 aaKnown RBP eCLIP26.85■■□□□ 1.89
LSM6-202ENST00000502781 ACAT1P24752 427 aaKnown RBP26.85■■□□□ 1.89
LSM6-202ENST00000502781 GNL1P36915 607 aaPredicted RBP26.85■■□□□ 1.89
LSM6-202ENST00000502781 CDH8P55286 799 aa26.85■■□□□ 1.89
LSM6-202ENST00000502781 TSPY1Q01534 308 aa26.85■■□□□ 1.89
LSM6-202ENST00000502781 MYL5Q02045 173 aa26.85■■□□□ 1.89
LSM6-202ENST00000502781 NCAPHQ15003 741 aa26.85■■□□□ 1.89
LSM6-202ENST00000502781 SMAD2Q15796 467 aaKnown RBP26.85■■□□□ 1.89
LSM6-202ENST00000502781 ANO6Q4KMQ2 910 aa26.85■■□□□ 1.89
LSM6-202ENST00000502781 SLC39A12Q504Y0 691 aa26.85■■□□□ 1.89
LSM6-202ENST00000502781 FAM171BQ6P995 826 aa26.85■■□□□ 1.89
LSM6-202ENST00000502781 TMC5Q6UXY8 1006 aa26.85■■□□□ 1.89
LSM6-202ENST00000502781 CYP26C1Q6V0L0 522 aa26.85■■□□□ 1.89
LSM6-202ENST00000502781 DCP1BQ8IZD4 617 aaKnown RBP26.85■■□□□ 1.89
LSM6-202ENST00000502781 BPIFA3Q9BQP9 254 aa26.85■■□□□ 1.89
LSM6-202ENST00000502781 APOL5Q9BWW9 433 aa26.85■■□□□ 1.89
LSM6-202ENST00000502781 PRKD2Q9BZL6 878 aa26.85■■□□□ 1.89
LSM6-202ENST00000502781 CRISPLD1Q9H336 500 aa26.85■■□□□ 1.89
LSM6-202ENST00000502781 CYP3A43Q9HB55 503 aa26.85■■□□□ 1.89
LSM6-202ENST00000502781 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.85■■□□□ 1.89
LSM6-202ENST00000502781 CDH9Q9ULB4 789 aa26.85■■□□□ 1.89
LSM6-202ENST00000502781 USP15Q9Y4E8 981 aaPredicted RBP26.85■■□□□ 1.89
LSM6-202ENST00000502781 CCDC195A0A1B0GUA6 201 aa26.84■■□□□ 1.89
LSM6-202ENST00000502781 BMP1P13497 986 aa26.84■■□□□ 1.89
LSM6-202ENST00000502781 ELF1P32519 619 aa26.84■■□□□ 1.89
LSM6-202ENST00000502781 RAP1GAPP47736 663 aa26.84■■□□□ 1.89
LSM6-202ENST00000502781 SCARA5Q6ZMJ2 495 aa26.84■■□□□ 1.89
LSM6-202ENST00000502781 ATAD1Q8NBU5 361 aa26.84■■□□□ 1.89
LSM6-202ENST00000502781 C2orf15Q8WU43 125 aaKnown RBP26.84■■□□□ 1.89
LSM6-202ENST00000502781 PGLYRP2Q96PD5 576 aa26.84■■□□□ 1.89
LSM6-202ENST00000502781 SNX25Q9H3E2 840 aa26.84■■□□□ 1.89
LSM6-202ENST00000502781 CYP4F11Q9HBI6 524 aa26.84■■□□□ 1.89
LSM6-202ENST00000502781 TMLHEQ9NVH6 421 aa26.84■■□□□ 1.89
LSM6-202ENST00000502781 EEF1GP26641 437 aaKnown RBP26.84■■□□□ 1.89
LSM6-202ENST00000502781 MTIF2P46199 727 aaKnown RBP26.84■■□□□ 1.89
LSM6-202ENST00000502781 INCA1Q0VD86 236 aa26.84■■□□□ 1.89
LSM6-202ENST00000502781 MAN2A1Q16706 1144 aa26.84■■□□□ 1.89
LSM6-202ENST00000502781 ZSCAN23Q3MJ62 389 aa26.84■■□□□ 1.89
LSM6-202ENST00000502781 WDR44Q5JSH3 913 aa26.84■■□□□ 1.89
LSM6-202ENST00000502781 PPM1LQ5SGD2 360 aa26.84■■□□□ 1.89
LSM6-202ENST00000502781 CES5AQ6NT32 575 aa26.84■■□□□ 1.89
LSM6-202ENST00000502781 OR6B3Q8NGW1 331 aa26.84■■□□□ 1.89
LSM6-202ENST00000502781 TATDN2Q93075 761 aa26.84■■□□□ 1.89
LSM6-202ENST00000502781 SYT15Q9BQS2 421 aa26.84■■□□□ 1.89
LSM6-202ENST00000502781 NAT10Q9H0A0 1025 aaKnown RBP26.84■■□□□ 1.89
LSM6-202ENST00000502781 MAGEC2Q9UBF1 373 aaPredicted RBP26.84■■□□□ 1.89
LSM6-202ENST00000502781 CDH22Q9UJ99 828 aa26.84■■□□□ 1.89
LSM6-202ENST00000502781 INSL5Q9Y5Q6 135 aa26.84■■□□□ 1.89
LSM6-202ENST00000502781 SPDYE4A6NLX3 237 aa26.83■■□□□ 1.88
LSM6-202ENST00000502781 KCNJ18B7U540 433 aa26.83■■□□□ 1.88
LSM6-202ENST00000502781 CLSTN1O94985 981 aa26.83■■□□□ 1.88
LSM6-202ENST00000502781 WEE2P0C1S8 567 aa26.83■■□□□ 1.88
LSM6-202ENST00000502781 CETN1Q12798 172 aa26.83■■□□□ 1.88
LSM6-202ENST00000502781 DUSP4Q13115 394 aa26.83■■□□□ 1.88
LSM6-202ENST00000502781 KCNJ12Q14500 433 aa26.83■■□□□ 1.88
LSM6-202ENST00000502781 NFE2Q16621 373 aaPredicted RBP26.83■■□□□ 1.88
LSM6-202ENST00000502781 HSP90AA4PQ58FG1 418 aa26.83■■□□□ 1.88
LSM6-202ENST00000502781 TCP11X2Q5H9J9 407 aa26.83■■□□□ 1.88
LSM6-202ENST00000502781 MIIPQ5JXC2 388 aa26.83■■□□□ 1.88
LSM6-202ENST00000502781 CREBRFQ8IUR6 639 aa26.83■■□□□ 1.88
LSM6-202ENST00000502781 SPPL2BQ8TCT7 592 aa26.83■■□□□ 1.88
LSM6-202ENST00000502781 FAM124BQ9H5Z6 455 aaPredicted RBP26.83■■□□□ 1.88
LSM6-202ENST00000502781 CRTAC1Q9NQ79 661 aa26.83■■□□□ 1.88
LSM6-202ENST00000502781 FANCLQ9NW38 375 aa26.83■■□□□ 1.88
LSM6-202ENST00000502781 FAM50BQ9Y247 325 aa26.83■■□□□ 1.88
LSM6-202ENST00000502781 MYBPHLA2RUH7 354 aa26.82■■□□□ 1.88
LSM6-202ENST00000502781 A8MXQ7 604 aa26.82■■□□□ 1.88
LSM6-202ENST00000502781 PRRG1O14668 218 aa26.82■■□□□ 1.88
LSM6-202ENST00000502781 ATP2C2O75185 946 aa26.82■■□□□ 1.88
LSM6-202ENST00000502781 PDGFRBP09619 1106 aa26.82■■□□□ 1.88
LSM6-202ENST00000502781 IL9P15248 144 aa26.82■■□□□ 1.88
LSM6-202ENST00000502781 CCDC142Q17RM4 750 aa26.82■■□□□ 1.88
LSM6-202ENST00000502781 UNC93AQ86WB7 457 aa26.82■■□□□ 1.88
LSM6-202ENST00000502781 EHBP1Q8NDI1 1231 aa26.82■■□□□ 1.88
LSM6-202ENST00000502781 TUBGCP2Q9BSJ2 902 aa26.82■■□□□ 1.88
LSM6-202ENST00000502781 HSD3B7Q9H2F3 369 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms