RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 GPIHBP1Q8IV16 184 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 NLRP7Q8WX94 980 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 SREK1Q8WXA9 508 aaKnown RBP7.8□□□□□ -1.16
PDGFC-203ENST00000502773 SEMA4DQ92854 862 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 CDCA5Q96FF9 252 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 DCLK3Q9C098 648 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 VRTNQ9H8Y1 702 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 CISHQ9NSE2 258 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 CPSF3Q9UKF6 684 aaKnown RBP7.8□□□□□ -1.16
PDGFC-203ENST00000502773 SHOC2Q9UQ13 582 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 IGKV6-21A0A0C4DH24 114 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 ESYT3A0FGR9 886 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 SIGLEC16A6NMB1 481 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 AP3B1O00203 1094 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 PRPSAP2O60256 369 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 TCEA3O75764 348 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 ATP5HO75947 161 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 SUN1O94901 812 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 STBD1O95210 358 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 GSTA2P09210 222 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 MMP8P22894 467 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 CDH5P33151 784 aaPredicted RBP7.8□□□□□ -1.16
PDGFC-203ENST00000502773 POLE2P56282 527 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 PPARDQ03181 441 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 ZNF211Q13398 564 aaPredicted RBP7.8□□□□□ -1.16
PDGFC-203ENST00000502773 SETDB1Q15047 1291 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 MFSD5Q6N075 450 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 MON1BQ7L1V2 547 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 NLRP14Q86W24 1093 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 RELL1Q8IUW5 271 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 PDIK1LQ8N165 341 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 NME8Q8N427 588 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 TRPM4Q8TD43 1214 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 BSNDQ8WZ55 320 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 DDX27Q96GQ7 796 aaKnown RBP7.8□□□□□ -1.16
PDGFC-203ENST00000502773 L3MBTL3Q96JM7 780 aaPredicted RBP7.8□□□□□ -1.16
PDGFC-203ENST00000502773 NT5C1AQ9BXI3 368 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 UBAP1Q9NZ09 502 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 RRM1P23921 792 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 RASSF2P50749 326 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 GSCP56915 257 aaPredicted RBP7.8□□□□□ -1.16
PDGFC-203ENST00000502773 PSMC1P62191 440 aaKnown RBP7.8□□□□□ -1.16
PDGFC-203ENST00000502773 CNGA2Q16280 664 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 PTGISQ16647 500 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 C1orf220Q5T0J3 134 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 PRELID2Q8N945 189 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 KCTD6Q8NC69 237 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 GABPB2Q8TAK5 448 aaPredicted RBP7.8□□□□□ -1.16
PDGFC-203ENST00000502773 CD101Q93033 1021 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 ITFG2Q969R8 447 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 CHMP6Q96FZ7 201 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 TNIP3Q96KP6 325 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 TSC22D3Q99576 134 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 KIFC3Q9BVG8 833 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 IQCGQ9H095 443 aaKnown RBP7.8□□□□□ -1.16
PDGFC-203ENST00000502773 PHIPQ8WWQ0 1821 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 ADAMTSL1Q8N6G6 1762 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 SLC15A5A6NIM6 579 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 MAMLD1Q13495 774 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 NOTUMQ6P988 496 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 LRRC31Q6UY01 552 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 TRIM74Q86UV6 250 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 TRIM73Q86UV7 250 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 GSPT2Q8IYD1 628 aaKnown RBP7.79□□□□□ -1.16
PDGFC-203ENST00000502773 CPA5Q8WXQ8 436 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 CYFIP2Q96F07 1278 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 HEXIM2Q96MH2 286 aaKnown RBP7.79□□□□□ -1.16
PDGFC-203ENST00000502773 PCDHB18PQ96TA0 734 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 FETUBQ9UGM5 382 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 SLC24A2Q9UI40 661 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 UBQLN1Q9UMX0 589 aaKnown RBP7.79□□□□□ -1.16
PDGFC-203ENST00000502773 RBBP6Q7Z6E9 1792 aaKnown RBP7.79□□□□□ -1.16
PDGFC-203ENST00000502773 MYH11P35749 1972 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 AGPSO00116 658 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 SNUPNO95149 360 aaKnown RBP7.79□□□□□ -1.16
PDGFC-203ENST00000502773 PYGMP11217 842 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 SCNN1AP37088 669 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 CNTN2Q02246 1040 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 KRT81Q14533 505 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 TRIM68Q6AZZ1 485 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 SESTD1Q86VW0 696 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 KLHL23Q8NBE8 558 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 OPTNQ96CV9 577 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 SNX25Q9H3E2 840 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 PCDH9Q9HC56 1237 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 SLC38A7Q9NVC3 462 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 BARX2Q9UMQ3 279 aaPredicted RBP7.79□□□□□ -1.16
PDGFC-203ENST00000502773 CNTNAP2Q9UHC6 1331 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 LRRD1A4D1F6 860 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 SOWAHBA6NEL2 793 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 TTC4O95801 387 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 RARAP10276 462 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 CPT1AP50416 773 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 MAGOHP61326 146 aaKnown RBP7.79□□□□□ -1.16
PDGFC-203ENST00000502773 ZNF844Q08AG5 666 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 ILF2Q12905 390 aaKnown RBP7.79□□□□□ -1.16
PDGFC-203ENST00000502773 SNCBQ16143 134 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 FYB2Q5VWT5 728 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 KCTD16Q68DU8 428 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 GPAT2Q6NUI2 795 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms