RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 STXBP5Q5T5C0 1151 aa13□□□□□ -0.33
CNOT4-211ENST00000498534 SLC39A4Q6P5W5 647 aa13□□□□□ -0.33
CNOT4-211ENST00000498534 DCP1BQ8IZD4 617 aaKnown RBP13□□□□□ -0.33
CNOT4-211ENST00000498534 SYNPOQ8N3V7 929 aa13□□□□□ -0.33
CNOT4-211ENST00000498534 TTC9BQ8N6N2 239 aa13□□□□□ -0.33
CNOT4-211ENST00000498534 OR10T2Q8NGX3 314 aa13□□□□□ -0.33
CNOT4-211ENST00000498534 TTC8Q8TAM2 541 aa13□□□□□ -0.33
CNOT4-211ENST00000498534 BPIFB1Q8TDL5 484 aa13□□□□□ -0.33
CNOT4-211ENST00000498534 POMGNT1Q8WZA1 660 aa13□□□□□ -0.33
CNOT4-211ENST00000498534 TMEM209Q96SK2 561 aa13□□□□□ -0.33
CNOT4-211ENST00000498534 PYM1Q9BRP8 204 aaKnown RBP13□□□□□ -0.33
CNOT4-211ENST00000498534 ZCWPW1Q9H0M4 648 aa13□□□□□ -0.33
CNOT4-211ENST00000498534 ST6GALNAC4Q9H4F1 302 aa13□□□□□ -0.33
CNOT4-211ENST00000498534 GTSE1Q9NYZ3 720 aa13□□□□□ -0.33
CNOT4-211ENST00000498534 CCDC39Q9UFE4 941 aa13□□□□□ -0.33
CNOT4-211ENST00000498534 NCOR2Q9Y618 2525 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 KPNA7A9QM74 516 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 CHURC1-FNTBB4DL54 471 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 IL18RAPO95256 599 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 RETP07949 1114 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 CTHP32929 405 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 SOX9P48436 509 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 FNTBP49356 437 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 SPEM2Q0P670 501 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 SF3A1Q15459 793 aaKnown RBP12.99□□□□□ -0.33
CNOT4-211ENST00000498534 SV2CQ496J9 727 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 ZNF720Q7Z2F6 126 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 LONP2Q86WA8 852 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 NT5DC4Q86YG4 428 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 SPPL2BQ8TCT7 592 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 GIPC2Q8TF65 315 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 ZFYVE19Q96K21 471 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 LRRC3BQ96PB8 259 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 RTKNQ9BST9 563 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 MKNK1Q9BUB5 465 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 CCSER1Q9C0I3 900 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 RBM12Q9NTZ6 932 aaKnown RBP12.99□□□□□ -0.33
CNOT4-211ENST00000498534 EXOC7Q9UPT5 735 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 STYXL1Q9Y6J8 313 aa12.99□□□□□ -0.33
CNOT4-211ENST00000498534 NCANO14594 1321 aa12.98□□□□□ -0.33
CNOT4-211ENST00000498534 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.98□□□□□ -0.33
CNOT4-211ENST00000498534 HRO43593 1189 aa12.98□□□□□ -0.33
CNOT4-211ENST00000498534 LRP3O75074 770 aa12.98□□□□□ -0.33
CNOT4-211ENST00000498534 PAPSS2O95340 614 aaPredicted RBP12.98□□□□□ -0.33
CNOT4-211ENST00000498534 TGM1P22735 817 aa12.98□□□□□ -0.33
CNOT4-211ENST00000498534 AVPR1AP37288 418 aa12.98□□□□□ -0.33
CNOT4-211ENST00000498534 PNPLA4P41247 253 aa12.98□□□□□ -0.33
CNOT4-211ENST00000498534 AMPD2Q01433 879 aa12.98□□□□□ -0.33
CNOT4-211ENST00000498534 TSPY1Q01534 308 aa12.98□□□□□ -0.33
CNOT4-211ENST00000498534 GAS6Q14393 721 aa12.98□□□□□ -0.33
CNOT4-211ENST00000498534 PON2Q15165 354 aa12.98□□□□□ -0.33
CNOT4-211ENST00000498534 ITPRIPL2Q3MIP1 535 aa12.98□□□□□ -0.33
CNOT4-211ENST00000498534 WSCD1Q658N2 575 aa12.98□□□□□ -0.33
CNOT4-211ENST00000498534 HEATR6Q6AI08 1181 aaKnown RBP12.98□□□□□ -0.33
CNOT4-211ENST00000498534 DYMQ7RTS9 669 aa12.98□□□□□ -0.33
CNOT4-211ENST00000498534 LRRC15Q8TF66 581 aa12.98□□□□□ -0.33
CNOT4-211ENST00000498534 CACTINQ8WUQ7 758 aaKnown RBP12.98□□□□□ -0.33
CNOT4-211ENST00000498534 HVCN1Q96D96 273 aa12.98□□□□□ -0.33
CNOT4-211ENST00000498534 FIZ1Q96SL8 496 aa12.98□□□□□ -0.33
CNOT4-211ENST00000498534 LPIN3Q9BQK8 851 aa12.98□□□□□ -0.33
CNOT4-211ENST00000498534 SLC46A2Q9BY10 475 aa12.98□□□□□ -0.33
CNOT4-211ENST00000498534 MRPL44Q9H9J2 332 aaKnown RBP12.98□□□□□ -0.33
CNOT4-211ENST00000498534 GKN1Q9NS71 199 aa12.98□□□□□ -0.33
CNOT4-211ENST00000498534 ABI2Q9NYB9 513 aaPredicted RBP12.98□□□□□ -0.33
CNOT4-211ENST00000498534 SEL1LQ9UBV2 794 aa12.98□□□□□ -0.33
CNOT4-211ENST00000498534 PCDHB5Q9Y5E4 795 aa12.98□□□□□ -0.33
CNOT4-211ENST00000498534 SOBPA7XYQ1 873 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 TISP43B9A030 160 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 FOXD2O60548 495 aaPredicted RBP12.97□□□□□ -0.33
CNOT4-211ENST00000498534 HAPLN1P10915 354 aaPredicted RBP12.97□□□□□ -0.33
CNOT4-211ENST00000498534 GAP43P17677 238 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 ATF6P18850 670 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 PDCP20941 246 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 HOXA6P31267 233 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 TXLNAP40222 546 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 CDR1P51861 262 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 CYP4F8P98187 520 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 GRIN1Q05586 938 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 TNK2Q07912 1038 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 BFSP1Q12934 665 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 NFE2Q16621 373 aaPredicted RBP12.97□□□□□ -0.33
CNOT4-211ENST00000498534 RRAGBQ5VZM2 374 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 TXNDC11Q6PKC3 985 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 CEP68Q76N32 757 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 SV2BQ7L1I2 683 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.97□□□□□ -0.33
CNOT4-211ENST00000498534 LRRTM3Q86VH5 581 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 CMTM8Q8IZV2 173 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 EPSTI1Q96J88 318 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 ZNF560Q96MR9 790 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 ACCSQ96QU6 501 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 PARD6AQ9NPB6 346 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 STK17AQ9UEE5 414 aa12.97□□□□□ -0.33
CNOT4-211ENST00000498534 SPTBN2O15020 2390 aa12.96□□□□□ -0.33
CNOT4-211ENST00000498534 DCDC2BA2VCK2 349 aa12.96□□□□□ -0.33
CNOT4-211ENST00000498534 K7ESF4 209 aa12.96□□□□□ -0.33
CNOT4-211ENST00000498534 HUS1O60921 280 aa12.96□□□□□ -0.33
CNOT4-211ENST00000498534 ATG13O75143 517 aa12.96□□□□□ -0.33
CNOT4-211ENST00000498534 PRPF40AO75400 957 aaKnown RBP12.96□□□□□ -0.33
CNOT4-211ENST00000498534 CD2BP2O95400 341 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms