RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 TNNC2P02585 160 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 DCNP07585 359 aaKnown RBP9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 CDR1P51861 262 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 KRT85P78386 507 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 RBP5P82980 135 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 BFSP1Q12934 665 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 CUL4BQ13620 913 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 GRM2Q14416 872 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 VEPH1Q14D04 833 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 ANGPT1Q15389 498 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 LMBRD2Q68DH5 695 aaPredicted RBP9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 DNAJB7Q7Z6W7 309 aaPredicted RBP9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 ITIH5Q86UX2 942 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 LRRTM3Q86VH5 581 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 CBWD2Q8IUF1 395 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 NELFCDQ8IXH7 590 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 GRAMD1CQ8IYS0 662 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 TMEM86AQ8N2M4 240 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 PDCL2Q8N4E4 241 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 RDH13Q8NBN7 331 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 PJA1Q8NG27 643 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 CXorf38Q8TB03 319 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 SHKBP1Q8TBC3 707 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 ZSCAN18Q8TBC5 510 aaPredicted RBP9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 FAM200AQ8TCP9 573 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 SCFD1Q8WVM8 642 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 SMARCD2Q92925 531 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 SPATA32Q96LK8 384 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 ZSWIM3Q96MP5 696 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 FOXQ1Q9C009 403 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 SLC39A2Q9NP94 309 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 AGPAT3Q9NRZ7 376 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 INTS13Q9NVM9 706 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 GDAP2Q9NXN4 497 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 ABI2Q9NYB9 513 aaPredicted RBP9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 SERTAD1Q9UHV2 236 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 SIX4Q9UIU6 781 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 L1RE1Q9UN81 338 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 SNX9Q9Y5X1 595 aa9.12□□□□□ -0.95
HMGXB4-207ENST00000498212 PTPRJQ12913 1337 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 A0A1B0GVL5 298 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 CLIC2O15247 247 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 SLFN14P0C7P3 912 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 HAPLN1P10915 354 aaPredicted RBP9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 PFKFB1P16118 471 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 PSMC3P17980 439 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 ATF6P18850 670 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 CMA1P23946 247 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 GABRR2P28476 465 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 CYP2J2P51589 502 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 SNRPFP62306 86 aaKnown RBP9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 MYL7Q01449 175 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 TSPY1Q01534 308 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 MYO1EQ12965 1108 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 UBXN2BQ14CS0 331 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 SNRNP35Q16560 246 aaKnown RBP9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 DUOXA2Q1HG44 320 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 SCARA3Q6AZY7 606 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 VITQ6UXI7 678 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 TPRG1Q6ZUI0 275 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 GAREM2Q75VX8 874 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 HS2ST1Q7LGA3 356 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 WDR49Q8IV35 697 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 TOP6BLQ8N6T0 577 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 OR5B17Q8NGF7 314 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 SPATA18Q8TC71 538 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 DEPDC1BQ8WUY9 529 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 LEO1Q8WVC0 666 aaPredicted RBP9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 DNASE1L2Q92874 299 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 FAM84AQ96KN4 292 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 LPIN3Q9BQK8 851 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 ACBD6Q9BR61 282 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 DDX23Q9BUQ8 820 aaKnown RBP9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 TRMT61BQ9BVS5 477 aaKnown RBP9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 ATXN3LQ9H3M9 355 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 BRD9Q9H8M2 597 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 TRPV4Q9HBA0 871 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 ZNF334Q9HCZ1 680 aaPredicted RBP9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 HEBP1Q9NRV9 189 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 DDX43Q9NXZ2 648 aaKnown RBP9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 DLGAP2Q9P1A6 1054 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 CGNQ9P2M7 1197 aaKnown RBP9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 ZDHHC9Q9Y397 364 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 PCDHB5Q9Y5E4 795 aa9.11□□□□□ -0.95
HMGXB4-207ENST00000498212 HEPACAM2A8MVW5 462 aa9.1□□□□□ -0.95
HMGXB4-207ENST00000498212 PROB1E7EW31 1015 aa9.1□□□□□ -0.95
HMGXB4-207ENST00000498212 ACTN4O43707 911 aaKnown RBP9.1□□□□□ -0.95
HMGXB4-207ENST00000498212 KLRC4O43908 158 aa9.1□□□□□ -0.95
HMGXB4-207ENST00000498212 LRRN2O75325 713 aa9.1□□□□□ -0.95
HMGXB4-207ENST00000498212 PRPF40AO75400 957 aaKnown RBP9.1□□□□□ -0.95
HMGXB4-207ENST00000498212 DLATP10515 647 aaKnown RBP9.1□□□□□ -0.95
HMGXB4-207ENST00000498212 TNNI1P19237 187 aa9.1□□□□□ -0.95
HMGXB4-207ENST00000498212 CD72P21854 359 aa9.1□□□□□ -0.95
HMGXB4-207ENST00000498212 ACAT1P24752 427 aaKnown RBP9.1□□□□□ -0.95
HMGXB4-207ENST00000498212 CDC25CP30307 473 aa9.1□□□□□ -0.95
HMGXB4-207ENST00000498212 GDI1P31150 447 aa9.1□□□□□ -0.95
HMGXB4-207ENST00000498212 NBL1P41271 181 aa9.1□□□□□ -0.95
HMGXB4-207ENST00000498212 VIPR2P41587 438 aa9.1□□□□□ -0.95
HMGXB4-207ENST00000498212 LHX1P48742 406 aa9.1□□□□□ -0.95
HMGXB4-207ENST00000498212 CYP24A1Q07973 514 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms