RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 CHRNB2P17787 502 aa15.13■□□□□ 0.01
VPS26A-209ENST00000497564 POU3F3P20264 500 aaPredicted RBP15.13■□□□□ 0.01
VPS26A-209ENST00000497564 TNFAIP3P21580 790 aa15.13■□□□□ 0.01
VPS26A-209ENST00000497564 VAV2P52735 878 aa15.13■□□□□ 0.01
VPS26A-209ENST00000497564 LILRA4P59901 499 aa15.13■□□□□ 0.01
VPS26A-209ENST00000497564 GFPT1Q06210 699 aaPredicted RBP15.13■□□□□ 0.01
VPS26A-209ENST00000497564 TUSC3Q13454 348 aa15.13■□□□□ 0.01
VPS26A-209ENST00000497564 SCARA5Q6ZMJ2 495 aa15.13■□□□□ 0.01
VPS26A-209ENST00000497564 FBXO22Q8NEZ5 403 aa15.13■□□□□ 0.01
VPS26A-209ENST00000497564 LNX1Q8TBB1 728 aaPredicted RBP15.13■□□□□ 0.01
VPS26A-209ENST00000497564 URGCPQ8TCY9 931 aa15.13■□□□□ 0.01
VPS26A-209ENST00000497564 DDX27Q96GQ7 796 aaKnown RBP15.13■□□□□ 0.01
VPS26A-209ENST00000497564 SMYD3Q9H7B4 428 aa15.13■□□□□ 0.01
VPS26A-209ENST00000497564 NAGPAQ9UK23 515 aa15.13■□□□□ 0.01
VPS26A-209ENST00000497564 BARX2Q9UMQ3 279 aaPredicted RBP15.13■□□□□ 0.01
VPS26A-209ENST00000497564 PCDHB7Q9Y5E2 793 aa15.13■□□□□ 0.01
VPS26A-209ENST00000497564 MRPL42Q9Y6G3 142 aaKnown RBP15.13■□□□□ 0.01
VPS26A-209ENST00000497564 KPNA7A9QM74 516 aa15.12■□□□□ 0.01
VPS26A-209ENST00000497564 TACC1O75410 805 aa15.12■□□□□ 0.01
VPS26A-209ENST00000497564 PAEPP09466 180 aa15.12■□□□□ 0.01
VPS26A-209ENST00000497564 AARSP49588 968 aaKnown RBP eCLIP15.12■□□□□ 0.01
VPS26A-209ENST00000497564 FMO1Q01740 532 aa15.12■□□□□ 0.01
VPS26A-209ENST00000497564 CYP27A1Q02318 531 aa15.12■□□□□ 0.01
VPS26A-209ENST00000497564 DSC1Q08554 894 aa15.12■□□□□ 0.01
VPS26A-209ENST00000497564 BTG3Q14201 252 aaPredicted RBP15.12■□□□□ 0.01
VPS26A-209ENST00000497564 UPP1Q16831 310 aa15.12■□□□□ 0.01
VPS26A-209ENST00000497564 NOMO2Q5JPE7 1267 aa15.12■□□□□ 0.01
VPS26A-209ENST00000497564 ALKBH5Q6P6C2 394 aaKnown RBP15.12■□□□□ 0.01
VPS26A-209ENST00000497564 DPH6Q7L8W6 267 aa15.12■□□□□ 0.01
VPS26A-209ENST00000497564 FIBCD1Q8N539 461 aa15.12■□□□□ 0.01
VPS26A-209ENST00000497564 TOP6BLQ8N6T0 577 aa15.12■□□□□ 0.01
VPS26A-209ENST00000497564 SLC20A1Q8WUM9 679 aa15.12■□□□□ 0.01
VPS26A-209ENST00000497564 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.12■□□□□ 0.01
VPS26A-209ENST00000497564 TRMT1Q9NXH9 659 aaKnown RBP15.12■□□□□ 0.01
VPS26A-209ENST00000497564 INTUQ9ULD6 942 aa15.12■□□□□ 0.01
VPS26A-209ENST00000497564 PCDHA13Q9Y5I0 950 aa15.12■□□□□ 0.01
VPS26A-209ENST00000497564 SNX9Q9Y5X1 595 aa15.12■□□□□ 0.01
VPS26A-209ENST00000497564 PODXLO00592 558 aa15.11■□□□□ 0.01
VPS26A-209ENST00000497564 SPTLC1O15269 473 aa15.11■□□□□ 0.01
VPS26A-209ENST00000497564 POMCP01189 267 aa15.11■□□□□ 0.01
VPS26A-209ENST00000497564 FGFR1P11362 822 aa15.11■□□□□ 0.01
VPS26A-209ENST00000497564 GZMAP12544 262 aa15.11■□□□□ 0.01
VPS26A-209ENST00000497564 CD58P19256 250 aa15.11■□□□□ 0.01
VPS26A-209ENST00000497564 GNA15P30679 374 aa15.11■□□□□ 0.01
VPS26A-209ENST00000497564 CTNNB1P35222 781 aa15.11■□□□□ 0.01
VPS26A-209ENST00000497564 ARHGAP25P42331 645 aa15.11■□□□□ 0.01
VPS26A-209ENST00000497564 MAGEA1P43355 309 aa15.11■□□□□ 0.01
VPS26A-209ENST00000497564 RAP1GAPP47736 663 aa15.11■□□□□ 0.01
VPS26A-209ENST00000497564 CDH8P55286 799 aa15.11■□□□□ 0.01
VPS26A-209ENST00000497564 TRIM72Q6ZMU5 477 aa15.11■□□□□ 0.01
VPS26A-209ENST00000497564 NYAP1Q6ZVC0 841 aa15.11■□□□□ 0.01
VPS26A-209ENST00000497564 KIAA1328Q86T90 577 aa15.11■□□□□ 0.01
VPS26A-209ENST00000497564 UNC93AQ86WB7 457 aa15.11■□□□□ 0.01
VPS26A-209ENST00000497564 GLYCTKQ8IVS8 523 aa15.11■□□□□ 0.01
VPS26A-209ENST00000497564 SPATA18Q8TC71 538 aa15.11■□□□□ 0.01
VPS26A-209ENST00000497564 WHAMMQ8TF30 809 aa15.11■□□□□ 0.01
VPS26A-209ENST00000497564 TSGA10Q9BZW7 698 aa15.11■□□□□ 0.01
VPS26A-209ENST00000497564 INPP5FQ9Y2H2 1132 aa15.11■□□□□ 0.01
VPS26A-209ENST00000497564 TMEM189-UBE2V1I3L0A0 370 aa15.1■□□□□ 0.01
VPS26A-209ENST00000497564 TUBB4AP04350 444 aa15.1■□□□□ 0.01
VPS26A-209ENST00000497564 MMEP08473 750 aa15.1■□□□□ 0.01
VPS26A-209ENST00000497564 BMPR1AP36894 532 aa15.1■□□□□ 0.01
VPS26A-209ENST00000497564 CLCNKBP51801 687 aa15.1■□□□□ 0.01
VPS26A-209ENST00000497564 RAD23BP54727 409 aa15.1■□□□□ 0.01
VPS26A-209ENST00000497564 SOWAHAQ2M3V2 549 aa15.1■□□□□ 0.01
VPS26A-209ENST00000497564 CCDC122Q5T0U0 273 aa15.1■□□□□ 0.01
VPS26A-209ENST00000497564 CLP1Q92989 425 aaKnown RBP15.1■□□□□ 0.01
VPS26A-209ENST00000497564 CASD1Q96PB1 797 aa15.1■□□□□ 0.01
VPS26A-209ENST00000497564 MMS19Q96T76 1030 aa15.1■□□□□ 0.01
VPS26A-209ENST00000497564 ISCUQ9H1K1 167 aa15.1■□□□□ 0.01
VPS26A-209ENST00000497564 ACP6Q9NPH0 428 aa15.1■□□□□ 0.01
VPS26A-209ENST00000497564 TBC1D13Q9NVG8 400 aa15.1■□□□□ 0.01
VPS26A-209ENST00000497564 KIAA1257Q9ULG3 409 aa15.1■□□□□ 0.01
VPS26A-209ENST00000497564 LRFN2Q9ULH4 789 aa15.1■□□□□ 0.01
VPS26A-209ENST00000497564 PCDHGC3Q9UN70 934 aa15.1■□□□□ 0.01
VPS26A-209ENST00000497564 ATG2AQ2TAZ0 1938 aa15.09■□□□□ 0.01
VPS26A-209ENST00000497564 RCCD1A6NED2 376 aa15.09■□□□□ 0.01
VPS26A-209ENST00000497564 CASTOR2A6NHX0 329 aa15.09■□□□□ 0.01
VPS26A-209ENST00000497564 TBKBP1A7MCY6 615 aa15.09■□□□□ 0.01
VPS26A-209ENST00000497564 BTNL10A8MVZ5 291 aa15.09■□□□□ 0.01
VPS26A-209ENST00000497564 H3BNC9 293 aa15.09■□□□□ 0.01
VPS26A-209ENST00000497564 KIF2AO00139 706 aaPredicted RBP15.09■□□□□ 0.01
VPS26A-209ENST00000497564 GRM6O15303 877 aa15.09■□□□□ 0.01
VPS26A-209ENST00000497564 KRT86O43790 486 aa15.09■□□□□ 0.01
VPS26A-209ENST00000497564 HUS1O60921 280 aa15.09■□□□□ 0.01
VPS26A-209ENST00000497564 CSPG5O95196 566 aa15.09■□□□□ 0.01
VPS26A-209ENST00000497564 WARSP23381 471 aaKnown RBP15.09■□□□□ 0.01
VPS26A-209ENST00000497564 TFF2Q03403 129 aa15.09■□□□□ 0.01
VPS26A-209ENST00000497564 KIF5AQ12840 1032 aa15.09■□□□□ 0.01
VPS26A-209ENST00000497564 GPM6BQ13491 265 aa15.09■□□□□ 0.01
VPS26A-209ENST00000497564 ARHGAP29Q52LW3 1261 aa15.09■□□□□ 0.01
VPS26A-209ENST00000497564 TAF3Q5VWG9 929 aa15.09■□□□□ 0.01
VPS26A-209ENST00000497564 PPP1R2P3Q6NXS1 205 aa15.09■□□□□ 0.01
VPS26A-209ENST00000497564 DCLRE1AQ6PJP8 1040 aa15.09■□□□□ 0.01
VPS26A-209ENST00000497564 PALB2Q86YC2 1186 aa15.09■□□□□ 0.01
VPS26A-209ENST00000497564 COLGALT2Q8IYK4 626 aa15.09■□□□□ 0.01
VPS26A-209ENST00000497564 CMTR2Q8IYT2 770 aaKnown RBP15.09■□□□□ 0.01
VPS26A-209ENST00000497564 ABI1Q8IZP0 508 aa15.09■□□□□ 0.01
VPS26A-209ENST00000497564 SLC4A11Q8NBS3 891 aa15.09■□□□□ 0.01
VPS26A-209ENST00000497564 C3orf58Q8NDZ4 430 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms