RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 AGAP1Q9UPQ3 857 aa13.96□□□□□ -0.17
FN1-226ENST00000496542 DPYSL4O14531 572 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 EXTL3O43909 919 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 KRT19P08727 400 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 RPS9P46781 194 aaKnown RBP13.95□□□□□ -0.18
FN1-226ENST00000496542 CYP4F8P98187 520 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 TSPY1Q01534 308 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 ZNF528Q3MIS6 628 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 ARID3BQ8IVW6 561 aaPredicted RBP13.95□□□□□ -0.18
FN1-226ENST00000496542 DCP1BQ8IZD4 617 aaKnown RBP13.95□□□□□ -0.18
FN1-226ENST00000496542 GLIS3Q8NEA6 775 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 SPPL2BQ8TCT7 592 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 CSGALNACT1Q8TDX6 532 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 GIPC2Q8TF65 315 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 C2orf15Q8WU43 125 aaKnown RBP13.95□□□□□ -0.18
FN1-226ENST00000496542 FAM3CQ92520 227 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 HPS3Q969F9 1004 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 DHX58Q96C10 678 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 GCNAQ96QF7 691 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 MKNK1Q9BUB5 465 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 MTMR12Q9C0I1 747 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 TNMDQ9H2S6 317 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 TMEM206Q9H813 350 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 PDE11AQ9HCR9 933 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 TRPV5Q9NQA5 729 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 FBXO4Q9UKT5 387 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 CACNA1AO00555 2505 aa13.95□□□□□ -0.18
FN1-226ENST00000496542 DMXL1Q9Y485 3027 aa13.94□□□□□ -0.18
FN1-226ENST00000496542 DENND4CQ5VZ89 1909 aa13.94□□□□□ -0.18
FN1-226ENST00000496542 KINO60870 393 aaKnown RBP13.94□□□□□ -0.18
FN1-226ENST00000496542 PRAMEF12O95522 483 aa13.94□□□□□ -0.18
FN1-226ENST00000496542 TMEM191BP0C7N4 346 aa13.94□□□□□ -0.18
FN1-226ENST00000496542 HAPLN1P10915 354 aaPredicted RBP13.94□□□□□ -0.18
FN1-226ENST00000496542 CCNE1P24864 410 aa13.94□□□□□ -0.18
FN1-226ENST00000496542 CDC25CP30307 473 aa13.94□□□□□ -0.18
FN1-226ENST00000496542 ASIC1P78348 528 aa13.94□□□□□ -0.18
FN1-226ENST00000496542 SMARCB1Q12824 385 aa13.94□□□□□ -0.18
FN1-226ENST00000496542 MTAPQ13126 283 aa13.94□□□□□ -0.18
FN1-226ENST00000496542 FZD5Q13467 585 aa13.94□□□□□ -0.18
FN1-226ENST00000496542 E2F4Q16254 413 aa13.94□□□□□ -0.18
FN1-226ENST00000496542 FOXD4L6Q3SYB3 417 aaPredicted RBP13.94□□□□□ -0.18
FN1-226ENST00000496542 LMBRD2Q68DH5 695 aaPredicted RBP13.94□□□□□ -0.18
FN1-226ENST00000496542 TSSK4Q6SA08 328 aa13.94□□□□□ -0.18
FN1-226ENST00000496542 FOXD4L3Q6VB84 417 aaPredicted RBP13.94□□□□□ -0.18
FN1-226ENST00000496542 STXBP4Q6ZWJ1 553 aa13.94□□□□□ -0.18
FN1-226ENST00000496542 GPD1LQ8N335 351 aa13.94□□□□□ -0.18
FN1-226ENST00000496542 PDCL2Q8N4E4 241 aa13.94□□□□□ -0.18
FN1-226ENST00000496542 CSGALNACT2Q8N6G5 542 aa13.94□□□□□ -0.18
FN1-226ENST00000496542 LRRC27Q9C0I9 530 aa13.94□□□□□ -0.18
FN1-226ENST00000496542 TMLHEQ9NVH6 421 aa13.94□□□□□ -0.18
FN1-226ENST00000496542 ITGA11Q9UKX5 1188 aa13.94□□□□□ -0.18
FN1-226ENST00000496542 L1RE1Q9UN81 338 aa13.94□□□□□ -0.18
FN1-226ENST00000496542 PCDHB5Q9Y5E4 795 aa13.94□□□□□ -0.18
FN1-226ENST00000496542 SLC38A8A6NNN8 435 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 ARNTLO00327 626 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 CHADO15335 359 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 CUTAO60888 179 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 HUS1O60921 280 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 PPP6R2O75170 966 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 YEATS4O95619 227 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 ACAT1P24752 427 aaKnown RBP13.93□□□□□ -0.18
FN1-226ENST00000496542 SOX9P48436 509 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 KPNA1P52294 538 aaPredicted RBP13.93□□□□□ -0.18
FN1-226ENST00000496542 FCHO2Q0JRZ9 810 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 SCARA3Q6AZY7 606 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 HSCBQ8IWL3 235 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 ZNF687Q8N1G0 1237 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 LRRC52Q8N7C0 313 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 STKLD1Q8NE28 680 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 TTC8Q8TAM2 541 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 ATRIPQ8WXE1 791 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 ZFYVE19Q96K21 471 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 LRRC3BQ96PB8 259 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 PI4K2AQ9BTU6 479 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 TRIM9Q9C026 710 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 SMG9Q9H0W8 520 aaKnown RBP13.93□□□□□ -0.18
FN1-226ENST00000496542 CHRDQ9H2X0 955 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 CUEDC2Q9H467 287 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 TASP1Q9H6P5 420 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 IL21Q9HBE4 155 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 PRMT8Q9NR22 394 aaPredicted RBP13.93□□□□□ -0.18
FN1-226ENST00000496542 KBTBD4Q9NVX7 518 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 DDX43Q9NXZ2 648 aaKnown RBP13.93□□□□□ -0.18
FN1-226ENST00000496542 SIX4Q9UIU6 781 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 PCDHGA2Q9Y5H1 932 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 OBSL1O75147 1896 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 KIF26AQ9ULI4 1882 aaPredicted RBP13.93□□□□□ -0.18
FN1-226ENST00000496542 SPTBN2O15020 2390 aa13.93□□□□□ -0.18
FN1-226ENST00000496542 KIAA0391O15091 583 aaKnown RBP13.92□□□□□ -0.18
FN1-226ENST00000496542 PRPF40AO75400 957 aaKnown RBP13.92□□□□□ -0.18
FN1-226ENST00000496542 HSP90AA1P07900 732 aaKnown RBP13.92□□□□□ -0.18
FN1-226ENST00000496542 GPR15P49685 360 aa13.92□□□□□ -0.18
FN1-226ENST00000496542 RBP5P82980 135 aa13.92□□□□□ -0.18
FN1-226ENST00000496542 AMPD3Q01432 767 aa13.92□□□□□ -0.18
FN1-226ENST00000496542 MYL7Q01449 175 aa13.92□□□□□ -0.18
FN1-226ENST00000496542 NFE2Q16621 373 aaPredicted RBP13.92□□□□□ -0.18
FN1-226ENST00000496542 SDHAF4Q5VUM1 108 aa13.92□□□□□ -0.18
FN1-226ENST00000496542 SHC4Q6S5L8 630 aa13.92□□□□□ -0.18
FN1-226ENST00000496542 OSTM1Q86WC4 334 aa13.92□□□□□ -0.18
FN1-226ENST00000496542 CBWD2Q8IUF1 395 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms