RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 CYP2C9P11712 490 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 AKR1A1P14550 325 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 SMPD1P17405 629 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 ACO1P21399 889 aaKnown RBP7.34□□□□□ -1.23
USP39-219ENST00000496047 EIF4BP23588 611 aaKnown RBP7.34□□□□□ -1.23
USP39-219ENST00000496047 GGCXP38435 758 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 GRM5P41594 1212 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 FNTAP49354 379 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 AARSP49588 968 aaKnown RBP eCLIP7.34□□□□□ -1.23
USP39-219ENST00000496047 MYL6P60660 151 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 RBP5P82980 135 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 LMNB2Q03252 620 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 CALCOCO2Q13137 446 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 PIGHQ14442 188 aaPredicted RBP7.34□□□□□ -1.23
USP39-219ENST00000496047 PTPROQ16827 1216 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 HADHQ16836 314 aaKnown RBP7.34□□□□□ -1.23
USP39-219ENST00000496047 SEZ6Q53EL9 994 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 SPDYCQ5MJ68 293 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 ZBTB41Q5SVQ8 909 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 RGMBQ6NW40 437 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 SLC27A1Q6PCB7 646 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 SCARA5Q6ZMJ2 495 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 LEKR1Q6ZMV7 388 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 SYDE1Q6ZW31 735 aaPredicted RBP7.34□□□□□ -1.23
USP39-219ENST00000496047 MON1BQ7L1V2 547 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 ERICH1Q86X53 443 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 PALB2Q86YC2 1186 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 PASD1Q8IV76 773 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 MREGQ8N565 214 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 LINC01465Q8N7H1 131 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 OLIG1Q8TAK6 271 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 FEZF2Q8TBJ5 459 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 CCHCR1Q8TD31 782 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 ZNF606Q8WXB4 792 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 HLA-CQ95604 372 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 PCDHB18PQ96TA0 734 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 NCAPGQ9BPX3 1015 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 USB1Q9BQ65 265 aaKnown RBP7.34□□□□□ -1.23
USP39-219ENST00000496047 AP1M1Q9BXS5 423 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 KATNBL1Q9H079 304 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 TSPYL1Q9H0U9 437 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 GOLPH3Q9H4A6 298 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 PDZD7Q9H5P4 517 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 APOBEC3GQ9HC16 384 aaKnown RBP7.34□□□□□ -1.23
USP39-219ENST00000496047 PTPRHQ9HD43 1115 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 DDX56Q9NY93 547 aaKnown RBP7.34□□□□□ -1.23
USP39-219ENST00000496047 SMARCAL1Q9NZC9 954 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 VPS18Q9P253 973 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 NXF1Q9UBU9 619 aaKnown RBP7.34□□□□□ -1.23
USP39-219ENST00000496047 DMGDHQ9UI17 866 aaKnown RBP7.34□□□□□ -1.23
USP39-219ENST00000496047 CPA4Q9UI42 421 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 NUB1Q9Y5A7 615 aa7.34□□□□□ -1.23
USP39-219ENST00000496047 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.33□□□□□ -1.24
USP39-219ENST00000496047 C17orf102A2RUQ5 167 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 LACTBL1A8MY62 500 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 ABLIM1O14639 778 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 DYNC1LI2O43237 492 aaPredicted RBP7.33□□□□□ -1.24
USP39-219ENST00000496047 B4GALT5O43286 388 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 FAM189A1O60320 539 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 TSPAN1O60635 241 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 PROSCO94903 275 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 NPTXRO95502 500 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 ECEL1O95672 775 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 ALDH1A1P00352 501 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 F2P00734 622 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 CD4P01730 458 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 ITGB3P05106 788 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 EDN1P05305 212 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 MYL3P08590 195 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 SMIM10L2AP0DMW4 78 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 SMIM10L2BP0DMW5 78 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 VDRP11473 427 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 ARF4P18085 180 aaPredicted RBP7.33□□□□□ -1.24
USP39-219ENST00000496047 RRM1P23921 792 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 PNPLA4P41247 253 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 ZNF132P52740 706 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 FCGRTP55899 365 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 PTP4A2Q12974 167 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 PPP1R7Q15435 360 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 WDR72Q3MJ13 1102 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 SGO2Q562F6 1265 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 GJC2Q5T442 439 aaPredicted RBP7.33□□□□□ -1.24
USP39-219ENST00000496047 MFSD14CQ5VZR4 134 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 EEF1DP3Q658K8 133 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 JADE1Q6IE81 842 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 CCDC137Q6PK04 289 aaKnown RBP7.33□□□□□ -1.24
USP39-219ENST00000496047 RUFY4Q6ZNE9 571 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 MMS22LQ6ZRQ5 1243 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 DNAAF5Q86Y56 855 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 SLC13A5Q86YT5 568 aaPredicted RBP7.33□□□□□ -1.24
USP39-219ENST00000496047 SCUBE3Q8IX30 993 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 GSPT2Q8IYD1 628 aaKnown RBP7.33□□□□□ -1.24
USP39-219ENST00000496047 CCDC105Q8IYK2 499 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 NME8Q8N427 588 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 BBOF1Q8ND07 529 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 NPLOC4Q8TAT6 608 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 FAM76AQ8TAV0 307 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 CPA5Q8WXQ8 436 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 EXOC4Q96A65 974 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 MAGOHBQ96A72 148 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms