RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 CALB1P05937 261 aa25.9■■□□□ 1.74
PPP1R3F-205ENST00000495799 GNL1P36915 607 aaPredicted RBP25.9■■□□□ 1.74
PPP1R3F-205ENST00000495799 CLLU1OSQ5K130 101 aa25.9■■□□□ 1.74
PPP1R3F-205ENST00000495799 UBE2Q2Q8WVN8 375 aa25.9■■□□□ 1.74
PPP1R3F-205ENST00000495799 TNIP3Q96KP6 325 aa25.9■■□□□ 1.74
PPP1R3F-205ENST00000495799 L2HGDHQ9H9P8 463 aa25.9■■□□□ 1.74
PPP1R3F-205ENST00000495799 CNOT8Q9UFF9 292 aaKnown RBP25.9■■□□□ 1.74
PPP1R3F-205ENST00000495799 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.9■■□□□ 1.74
PPP1R3F-205ENST00000495799 MTA2O94776 668 aa25.89■■□□□ 1.74
PPP1R3F-205ENST00000495799 AARSP49588 968 aaKnown RBP eCLIP25.89■■□□□ 1.74
PPP1R3F-205ENST00000495799 LRRC26Q2I0M4 334 aa25.89■■□□□ 1.74
PPP1R3F-205ENST00000495799 CNKSR3Q6P9H4 555 aa25.89■■□□□ 1.74
PPP1R3F-205ENST00000495799 DCLRE1AQ6PJP8 1040 aa25.89■■□□□ 1.74
PPP1R3F-205ENST00000495799 MON1BQ7L1V2 547 aa25.89■■□□□ 1.74
PPP1R3F-205ENST00000495799 PDCL2Q8N4E4 241 aa25.89■■□□□ 1.74
PPP1R3F-205ENST00000495799 KBTBD7Q8WVZ9 684 aa25.89■■□□□ 1.74
PPP1R3F-205ENST00000495799 SENP8Q96LD8 212 aa25.89■■□□□ 1.74
PPP1R3F-205ENST00000495799 FAM193BQ96PV7 902 aaPredicted RBP25.89■■□□□ 1.74
PPP1R3F-205ENST00000495799 ZSWIM1Q9BR11 485 aa25.89■■□□□ 1.74
PPP1R3F-205ENST00000495799 PRDM10Q9NQV6 1147 aa25.89■■□□□ 1.74
PPP1R3F-205ENST00000495799 SCN5AQ14524 2016 aa25.89■■□□□ 1.73
PPP1R3F-205ENST00000495799 GRID2IPA4D2P6 1211 aa25.88■■□□□ 1.73
PPP1R3F-205ENST00000495799 O00370 1275 aa25.88■■□□□ 1.73
PPP1R3F-205ENST00000495799 CFHP08603 1231 aa25.88■■□□□ 1.73
PPP1R3F-205ENST00000495799 ORC1Q13415 861 aa25.88■■□□□ 1.73
PPP1R3F-205ENST00000495799 PAPD7Q5XG87 772 aaKnown RBP25.88■■□□□ 1.73
PPP1R3F-205ENST00000495799 LCLAT1Q6UWP7 414 aa25.88■■□□□ 1.73
PPP1R3F-205ENST00000495799 MRPL47Q9HD33 250 aaKnown RBP25.88■■□□□ 1.73
PPP1R3F-205ENST00000495799 DSEQ9UL01 958 aa25.88■■□□□ 1.73
PPP1R3F-205ENST00000495799 STXBP5LQ9Y2K9 1186 aa25.88■■□□□ 1.73
PPP1R3F-205ENST00000495799 SCINQ9Y6U3 715 aa25.88■■□□□ 1.73
PPP1R3F-205ENST00000495799 MICAL2O94851 1124 aa25.88■■□□□ 1.73
PPP1R3F-205ENST00000495799 ODC1P11926 461 aa25.88■■□□□ 1.73
PPP1R3F-205ENST00000495799 LHX1P48742 406 aa25.88■■□□□ 1.73
PPP1R3F-205ENST00000495799 RNASELQ05823 741 aaKnown RBP25.88■■□□□ 1.73
PPP1R3F-205ENST00000495799 ACOT1Q86TX2 421 aa25.88■■□□□ 1.73
PPP1R3F-205ENST00000495799 NPAS4Q8IUM7 802 aa25.88■■□□□ 1.73
PPP1R3F-205ENST00000495799 CRYBG2Q8N1P7 616 aa25.88■■□□□ 1.73
PPP1R3F-205ENST00000495799 C1orf131Q8NDD1 294 aaKnown RBP25.88■■□□□ 1.73
PPP1R3F-205ENST00000495799 MRPL9Q9BYD2 267 aaKnown RBP25.88■■□□□ 1.73
PPP1R3F-205ENST00000495799 OSGEPQ9NPF4 335 aa25.88■■□□□ 1.73
PPP1R3F-205ENST00000495799 STRIP2Q9ULQ0 834 aa25.88■■□□□ 1.73
PPP1R3F-205ENST00000495799 MYH10P35580 1976 aa25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 M0QYV0 167 aa25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 CAPN15O75808 1086 aa25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 B3GAT3O94766 335 aa25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 ATP1A1P05023 1023 aaKnown RBP25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 FGFR1P11362 822 aa25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 MMP8P22894 467 aa25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 SSTR3P32745 418 aaPredicted RBP25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 IKBKEQ14164 716 aa25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 ARHGAP17Q68EM7 881 aa25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 DENND1BQ6P3S1 775 aa25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 DEFB128Q7Z7B8 93 aa25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 ERICH1Q86X53 443 aa25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 METTL23Q86XA0 190 aa25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 ZNF564Q8TBZ8 553 aaPredicted RBP25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 C11orf70Q9BRQ4 267 aa25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 NUP85Q9BW27 656 aa25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 MIS12Q9H081 205 aa25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 HESX1Q9UBX0 185 aa25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 CDC23Q9UJX2 597 aa25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 MRFAP1Q9Y605 127 aa25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 SAR1BQ9Y6B6 198 aa25.87■■□□□ 1.73
PPP1R3F-205ENST00000495799 ENC1O14682 589 aa25.86■■□□□ 1.73
PPP1R3F-205ENST00000495799 RIOK3O14730 519 aaKnown RBP25.86■■□□□ 1.73
PPP1R3F-205ENST00000495799 DSC1Q08554 894 aa25.86■■□□□ 1.73
PPP1R3F-205ENST00000495799 DAAM2Q86T65 1068 aa25.86■■□□□ 1.73
PPP1R3F-205ENST00000495799 LRRC57Q8N9N7 239 aa25.86■■□□□ 1.73
PPP1R3F-205ENST00000495799 TBC1D13Q9NVG8 400 aa25.86■■□□□ 1.73
PPP1R3F-205ENST00000495799 TSPAN16Q9UKR8 245 aa25.86■■□□□ 1.73
PPP1R3F-205ENST00000495799 HYOU1Q9Y4L1 999 aa25.86■■□□□ 1.73
PPP1R3F-205ENST00000495799 TMEM189-UBE2V1I3L0A0 370 aa25.85■■□□□ 1.73
PPP1R3F-205ENST00000495799 TIMP1P01033 207 aa25.85■■□□□ 1.73
PPP1R3F-205ENST00000495799 SETSIPP0DME0 302 aa25.85■■□□□ 1.73
PPP1R3F-205ENST00000495799 PRLRP16471 622 aa25.85■■□□□ 1.73
PPP1R3F-205ENST00000495799 TERF1P54274 439 aa25.85■■□□□ 1.73
PPP1R3F-205ENST00000495799 C11orf63Q6NUN7 778 aa25.85■■□□□ 1.73
PPP1R3F-205ENST00000495799 MMS22LQ6ZRQ5 1243 aa25.85■■□□□ 1.73
PPP1R3F-205ENST00000495799 SLFN11Q7Z7L1 901 aa25.85■■□□□ 1.73
PPP1R3F-205ENST00000495799 C3orf58Q8NDZ4 430 aa25.85■■□□□ 1.73
PPP1R3F-205ENST00000495799 GABRDO14764 452 aa25.84■■□□□ 1.73
PPP1R3F-205ENST00000495799 KIAA0355O15063 1070 aa25.84■■□□□ 1.73
PPP1R3F-205ENST00000495799 ATMINO43313 823 aaPredicted RBP25.84■■□□□ 1.73
PPP1R3F-205ENST00000495799 TCP1P17987 556 aaKnown RBP25.84■■□□□ 1.73
PPP1R3F-205ENST00000495799 SNX16P57768 344 aa25.84■■□□□ 1.73
PPP1R3F-205ENST00000495799 AMPD2Q01433 879 aa25.84■■□□□ 1.73
PPP1R3F-205ENST00000495799 GOLGA7BQ2TAP0 167 aa25.84■■□□□ 1.73
PPP1R3F-205ENST00000495799 MEI1Q5TIA1 1274 aa25.84■■□□□ 1.73
PPP1R3F-205ENST00000495799 WSCD1Q658N2 575 aa25.84■■□□□ 1.73
PPP1R3F-205ENST00000495799 PEX26Q7Z412 305 aa25.84■■□□□ 1.73
PPP1R3F-205ENST00000495799 MCOLN1Q9GZU1 580 aa25.84■■□□□ 1.73
PPP1R3F-205ENST00000495799 PARVAQ9NVD7 372 aa25.84■■□□□ 1.73
PPP1R3F-205ENST00000495799 CACNG4Q9UBN1 327 aa25.84■■□□□ 1.73
PPP1R3F-205ENST00000495799 LCMT1Q9UIC8 334 aa25.84■■□□□ 1.73
PPP1R3F-205ENST00000495799 AMFRQ9UKV5 643 aa25.84■■□□□ 1.73
PPP1R3F-205ENST00000495799 SNX12Q9UMY4 172 aa25.84■■□□□ 1.73
PPP1R3F-205ENST00000495799 COG5Q9UP83 839 aa25.84■■□□□ 1.73
PPP1R3F-205ENST00000495799 MICAL3Q7RTP6 2002 aa25.84■■□□□ 1.73
PPP1R3F-205ENST00000495799 CEP350Q5VT06 3117 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms