RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 SUPT20HL2P0C7V6 817 aa13.73□□□□□ -0.21
PTPN7-217ENST00000495688 SSTR1P30872 391 aa13.73□□□□□ -0.21
PTPN7-217ENST00000495688 CLNS1AP54105 237 aaKnown RBP13.73□□□□□ -0.21
PTPN7-217ENST00000495688 NRLP54845 237 aa13.73□□□□□ -0.21
PTPN7-217ENST00000495688 GPX6P59796 221 aa13.73□□□□□ -0.21
PTPN7-217ENST00000495688 SUPT20HL1Q3ZLR7 823 aa13.73□□□□□ -0.21
PTPN7-217ENST00000495688 MSS51Q4VC12 460 aa13.73□□□□□ -0.21
PTPN7-217ENST00000495688 ANKRD22Q5VYY1 191 aa13.73□□□□□ -0.21
PTPN7-217ENST00000495688 DNAJC24Q6P3W2 148 aa13.73□□□□□ -0.21
PTPN7-217ENST00000495688 WDTC1Q8N5D0 677 aa13.73□□□□□ -0.21
PTPN7-217ENST00000495688 REPS2Q8NFH8 660 aa13.73□□□□□ -0.21
PTPN7-217ENST00000495688 CGRRF1Q99675 332 aa13.73□□□□□ -0.21
PTPN7-217ENST00000495688 CYP39A1Q9NYL5 469 aa13.73□□□□□ -0.21
PTPN7-217ENST00000495688 HAO1Q9UJM8 370 aa13.73□□□□□ -0.21
PTPN7-217ENST00000495688 C15orf41Q9Y2V0 281 aa13.73□□□□□ -0.21
PTPN7-217ENST00000495688 NFASCO94856 1347 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 TCRBV5S1A1TA0A578 114 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 DKC1O60832 514 aaKnown RBP eCLIP13.72□□□□□ -0.21
PTPN7-217ENST00000495688 CETN2P41208 172 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 CDKN2BP42772 138 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 ZNF132P52740 706 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 VCPP55072 806 aaKnown RBP13.72□□□□□ -0.21
PTPN7-217ENST00000495688 MYL6P60660 151 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 LMNB2Q03252 620 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 ENPEPQ07075 957 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 MOGSQ13724 837 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 GPAT2Q6NUI2 795 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 RPAINQ86UA6 219 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 TMEM130Q8N3G9 435 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 RIBC1Q8N443 379 aaPredicted RBP13.72□□□□□ -0.21
PTPN7-217ENST00000495688 TFAP2BQ92481 460 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 SMC6Q96SB8 1091 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 PLCD4Q9BRC7 762 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 ADGRA2Q96PE1 1338 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 WDR91A4D1P6 747 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 DPEP1P16444 411 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 KRT4P19013 534 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 KCNA3P22001 575 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 TBXAS1P24557 533 aaPredicted RBP13.72□□□□□ -0.21
PTPN7-217ENST00000495688 BACE1P56817 501 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 ACVR2BQ13705 512 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 TFDP1Q14186 410 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 SPARCL1Q14515 664 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 CCDC142Q17RM4 750 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 TFDP3Q5H9I0 405 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 XRRA1Q6P2D8 792 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 SAMD7Q7Z3H4 446 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 VSIG1Q86XK7 387 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 KLF6Q99612 283 aaPredicted RBP13.72□□□□□ -0.21
PTPN7-217ENST00000495688 DHX33Q9H6R0 707 aaKnown RBP13.72□□□□□ -0.21
PTPN7-217ENST00000495688 ZWILCHQ9H900 591 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 STARD13Q9Y3M8 1113 aa13.72□□□□□ -0.21
PTPN7-217ENST00000495688 CLUHO75153 1309 aa13.71□□□□□ -0.21
PTPN7-217ENST00000495688 SPATA31C2B4DYI2 1134 aa13.71□□□□□ -0.21
PTPN7-217ENST00000495688 GOLGA8RI6L899 631 aa13.71□□□□□ -0.21
PTPN7-217ENST00000495688 ALOX15BO15296 676 aa13.71□□□□□ -0.21
PTPN7-217ENST00000495688 PRPF4O43172 522 aaKnown RBP eCLIP13.71□□□□□ -0.21
PTPN7-217ENST00000495688 NAMPTP43490 491 aa13.71□□□□□ -0.21
PTPN7-217ENST00000495688 TGFB2P61812 414 aa13.71□□□□□ -0.21
PTPN7-217ENST00000495688 MORF4L2Q15014 288 aa13.71□□□□□ -0.21
PTPN7-217ENST00000495688 FNBP1LQ5T0N5 605 aa13.71□□□□□ -0.21
PTPN7-217ENST00000495688 ZNF449Q6P9G9 518 aa13.71□□□□□ -0.21
PTPN7-217ENST00000495688 GRAMD1AQ96CP6 724 aa13.71□□□□□ -0.21
PTPN7-217ENST00000495688 WDR83Q9BRX9 315 aaKnown RBP13.71□□□□□ -0.21
PTPN7-217ENST00000495688 ZNF302Q9NR11 478 aa13.71□□□□□ -0.21
PTPN7-217ENST00000495688 CISHQ9NSE2 258 aa13.71□□□□□ -0.21
PTPN7-217ENST00000495688 NUMBLQ9Y6R0 609 aa13.71□□□□□ -0.21
PTPN7-217ENST00000495688 PARP14Q460N5 1801 aa13.71□□□□□ -0.21
PTPN7-217ENST00000495688 TCRBV7S3A2A0A539 114 aa13.71□□□□□ -0.22
PTPN7-217ENST00000495688 H0YCG3 227 aa13.71□□□□□ -0.22
PTPN7-217ENST00000495688 MAGEB2O15479 319 aa13.71□□□□□ -0.22
PTPN7-217ENST00000495688 TYROBPO43914 113 aa13.71□□□□□ -0.22
PTPN7-217ENST00000495688 CBX6O95503 412 aa13.71□□□□□ -0.22
PTPN7-217ENST00000495688 ASS1P00966 412 aaKnown RBP13.71□□□□□ -0.22
PTPN7-217ENST00000495688 OATP04181 439 aa13.71□□□□□ -0.22
PTPN7-217ENST00000495688 RFC1P35251 1148 aaPredicted RBP13.71□□□□□ -0.22
PTPN7-217ENST00000495688 ARL2P36404 184 aa13.71□□□□□ -0.22
PTPN7-217ENST00000495688 HIRAP54198 1017 aaPredicted RBP13.71□□□□□ -0.22
PTPN7-217ENST00000495688 CAPSQ13938 189 aa13.71□□□□□ -0.22
PTPN7-217ENST00000495688 SYCP2LQ5T4T6 812 aa13.71□□□□□ -0.22
PTPN7-217ENST00000495688 DRICH1Q6PGQ1 229 aaPredicted RBP13.71□□□□□ -0.22
PTPN7-217ENST00000495688 LVRNQ6Q4G3 990 aa13.71□□□□□ -0.22
PTPN7-217ENST00000495688 TDRPQ86YL5 185 aa13.71□□□□□ -0.22
PTPN7-217ENST00000495688 KIAA0319LQ8IZA0 1049 aa13.71□□□□□ -0.22
PTPN7-217ENST00000495688 UBR7Q8N806 425 aa13.71□□□□□ -0.22
PTPN7-217ENST00000495688 FBF1Q8TES7 1133 aa13.71□□□□□ -0.22
PTPN7-217ENST00000495688 SLC7A3Q8WY07 619 aa13.71□□□□□ -0.22
PTPN7-217ENST00000495688 ZNF570Q96NI8 536 aa13.71□□□□□ -0.22
PTPN7-217ENST00000495688 LRRC37BQ96QE4 947 aa13.71□□□□□ -0.22
PTPN7-217ENST00000495688 TCHPQ9BT92 498 aa13.71□□□□□ -0.22
PTPN7-217ENST00000495688 NOP53Q9NZM5 478 aaKnown RBP13.71□□□□□ -0.22
PTPN7-217ENST00000495688 EDF1O60869 148 aaKnown RBP13.7□□□□□ -0.22
PTPN7-217ENST00000495688 CD48P09326 243 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 IL1R2P27930 398 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 CTCFP49711 727 aaPredicted RBP13.7□□□□□ -0.22
PTPN7-217ENST00000495688 YARSP54577 528 aaKnown RBP13.7□□□□□ -0.22
PTPN7-217ENST00000495688 CNTN2Q02246 1040 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 ORC1Q13415 861 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 NAA25Q14CX7 972 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 PDK4Q16654 411 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms