RNA–Protein interactions for RNA: ENST00000495588.2

GAPVD1-218, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-218ENST00000495588 PDHXO00330 501 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 NPHS1O60500 1241 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 FZD7O75084 574 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 ZBED4O75132 1171 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 CNMDO75829 334 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 ICAM1P05362 532 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 JMJD7P0C870 316 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 KRT2P35908 639 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 ACVRL1P37023 503 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 HERVK_113P62684 666 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 KIF23Q02241 960 aaPredicted RBP6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 RESTQ13127 1097 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 LSAMPQ13449 338 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 TMEM132BQ14DG7 1078 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 PCBP1Q15365 356 aaKnown RBP eCLIP6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 SEPT7Q16181 437 aaKnown RBP6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 CRB2Q5IJ48 1285 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 CDCA2Q69YH5 1023 aaPredicted RBP6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 FAM173BQ6P4H8 233 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 CNNM4Q6P4Q7 775 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 PKN3Q6P5Z2 889 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 SPRED1Q7Z699 444 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 ANKRD23Q86SG2 305 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 DIS3L2Q8IYB7 885 aaKnown RBP6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 TNPO1Q92973 898 aaKnown RBP6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 CHAMP1Q96JM3 812 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 TXNRD2Q9NNW7 524 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 HOMER2Q9NSB8 354 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 HOXC10Q9NYD6 342 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 BTBD7Q9P203 1132 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 CCPG1Q9ULG6 757 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 SLC45A1Q9Y2W3 748 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 RIPK3Q9Y572 518 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 CTDP1Q9Y5B0 961 aaPredicted RBP6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 PCDHA2Q9Y5H9 948 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 MYH15Q9Y2K3 1946 aa6.24□□□□□ -1.41
GAPVD1-218ENST00000495588 CBX4O00257 560 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 ATP2A1O14983 1001 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 SOD2P04179 222 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 ALAS1P13196 640 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 GRK2P25098 689 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 U2AF2P26368 475 aaKnown RBP eCLIP6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 PMLP29590 882 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 GNA11P29992 359 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 GRK3P35626 688 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 MECP2P51608 486 aaKnown RBP6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 ADCY7P51828 1080 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 OAZ1P54368 228 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 RPL11P62913 178 aaKnown RBP6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 PLS1Q14651 629 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 SAFBQ15424 915 aaKnown RBP eCLIP6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 UBE2SQ16763 222 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 DEFB115Q30KQ5 88 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 MUM1L1Q5H9M0 696 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 EARS2Q5JPH6 523 aaKnown RBP6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 SNRNP48Q6IEG0 339 aaKnown RBP6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 CRIP3Q6Q6R5 217 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 UBE2R2Q712K3 238 aaPredicted RBP6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 DDX53Q86TM3 631 aaKnown RBP6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 NOSTRINQ8IVI9 506 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 BLIDQ8IZY5 108 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 Q8N1X5 172 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 CCDC12Q8WUD4 166 aaPredicted RBP6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 TBC1D5Q92609 795 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 PGBD1Q96JS3 809 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 CAPNS2Q96L46 248 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 PAGR1Q9BTK6 254 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 FOXP1Q9H334 677 aaPredicted RBP6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 C6orf50Q9HD87 102 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 RIC8AQ9NPQ8 531 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 RBPJLQ9UBG7 517 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 PCDHA6Q9UN73 950 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 X6R8D5 127 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 RBBP6Q7Z6E9 1792 aaKnown RBP6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 ABCB11O95342 1321 aa6.23□□□□□ -1.41
GAPVD1-218ENST00000495588 FAM47E-STBD1D6RA91 191 aa6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 MEIS2O14770 477 aa6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 BPIP17213 487 aa6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 TACR1P25103 407 aa6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 CALML3P27482 149 aa6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 CNGA1P29973 690 aa6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 HOXA13P31271 388 aaPredicted RBP6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 SREBF2Q12772 1141 aa6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 TRAF1Q13077 416 aa6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 NOGQ13253 232 aa6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 HABP4Q5JVS0 413 aaKnown RBP6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 JAKMIP3Q5VZ66 844 aa6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 GALNT17Q6IS24 598 aa6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 USP17L6PQ6QN14 398 aa6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 GLB1LQ6UWU2 654 aa6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 PIK3AP1Q6ZUJ8 805 aa6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 C16orf59Q7L2K0 433 aa6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 STRA8Q7Z7C7 330 aa6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 DDX42Q86XP3 938 aaKnown RBP eCLIP6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 RIOX2Q8IUF8 465 aa6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 ZC3H7AQ8IWR0 971 aaKnown RBP6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 ANKRD13CQ8N6S4 541 aa6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 MB21D1Q8N884 522 aa6.22□□□□□ -1.41
GAPVD1-218ENST00000495588 PLEKHO2Q8TD55 490 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms