RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 ERVFC1P60507 584 aa8.97□□□□□ -0.97
RIF1-211ENST00000494333 DLX2Q07687 328 aaPredicted RBP8.97□□□□□ -0.97
RIF1-211ENST00000494333 LAMTOR4Q0VGL1 99 aa8.97□□□□□ -0.97
RIF1-211ENST00000494333 EMC2Q15006 297 aa8.97□□□□□ -0.97
RIF1-211ENST00000494333 RABEP1Q15276 862 aa8.97□□□□□ -0.97
RIF1-211ENST00000494333 LONRF3Q496Y0 759 aa8.97□□□□□ -0.97
RIF1-211ENST00000494333 SRGAP1Q7Z6B7 1085 aa8.97□□□□□ -0.97
RIF1-211ENST00000494333 FERMT3Q86UX7 667 aa8.97□□□□□ -0.97
RIF1-211ENST00000494333 COLGALT1Q8NBJ5 622 aa8.97□□□□□ -0.97
RIF1-211ENST00000494333 RNF149Q8NC42 400 aa8.97□□□□□ -0.97
RIF1-211ENST00000494333 PIGOQ8TEQ8 1089 aa8.97□□□□□ -0.97
RIF1-211ENST00000494333 PPP2R3CQ969Q6 453 aa8.97□□□□□ -0.97
RIF1-211ENST00000494333 UPF2Q9HAU5 1272 aaKnown RBP8.97□□□□□ -0.97
RIF1-211ENST00000494333 ANKEF1Q9NU02 776 aa8.97□□□□□ -0.97
RIF1-211ENST00000494333 GMIPQ9P107 970 aa8.97□□□□□ -0.97
RIF1-211ENST00000494333 PPT2Q9UMR5 302 aa8.97□□□□□ -0.97
RIF1-211ENST00000494333 PIN4Q9Y237 131 aaKnown RBP8.97□□□□□ -0.97
RIF1-211ENST00000494333 MYH9P35579 1960 aaKnown RBP8.97□□□□□ -0.97
RIF1-211ENST00000494333 EVPLQ92817 2033 aa8.97□□□□□ -0.97
RIF1-211ENST00000494333 PER2O15055 1255 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 LINC01565O15544 149 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 CYP26A1O43174 497 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 XRCC6P12956 609 aaKnown RBP eCLIP8.96□□□□□ -0.98
RIF1-211ENST00000494333 ATF7P17544 494 aaPredicted RBP8.96□□□□□ -0.98
RIF1-211ENST00000494333 PBX3P40426 434 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 SOX9P48436 509 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 RARRES1P49788 294 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 KRT17Q04695 432 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 UBE3AQ05086 875 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 ADAM15Q13444 863 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 COL9A2Q14055 689 aaPredicted RBP8.96□□□□□ -0.98
RIF1-211ENST00000494333 MXD4Q14582 209 aaPredicted RBP8.96□□□□□ -0.98
RIF1-211ENST00000494333 CLLU1OSQ5K130 101 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 TTC38Q5R3I4 469 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 OVOS1Q6IE37 1185 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 KCNT2Q6UVM3 1135 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 ADGRD2Q7Z7M1 963 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 CATSPER3Q86XQ3 398 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 NOSTRINQ8IVI9 506 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 LRRC43Q8N309 656 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 LPPQ93052 612 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 HEXIM2Q96MH2 286 aaKnown RBP8.96□□□□□ -0.98
RIF1-211ENST00000494333 CCDC43Q96MW1 224 aaKnown RBP8.96□□□□□ -0.98
RIF1-211ENST00000494333 FERD3LQ96RJ6 166 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 MINDY3Q9H8M7 445 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 LRRC4CQ9HCJ2 640 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 XPNPEP1Q9NQW7 623 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 TLR9Q9NR96 1032 aa8.96□□□□□ -0.98
RIF1-211ENST00000494333 PUF60Q9UHX1 559 aaKnown RBP8.96□□□□□ -0.98
RIF1-211ENST00000494333 COL4A4P53420 1690 aaPredicted RBP8.96□□□□□ -0.98
RIF1-211ENST00000494333 MEIS3P2A8K0S8 358 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 NT5C1B-RDH14C9J2C7 533 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 ZNF623O75123 536 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 MED24O75448 989 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 OR52Z1P0C646 297 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 FOSL1P15407 271 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 U2AF2P26368 475 aaKnown RBP eCLIP8.95□□□□□ -0.985e-6■■□□□ 11.9
RIF1-211ENST00000494333 HOXA11P31270 313 aaPredicted RBP8.95□□□□□ -0.98
RIF1-211ENST00000494333 NRIP1P48552 1158 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 TRAPPC10P48553 1259 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 ALDH7A1P49419 539 aaKnown RBP8.95□□□□□ -0.98
RIF1-211ENST00000494333 NDUFV1P49821 464 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 RAB27AP51159 221 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 NCBP1Q09161 790 aaKnown RBP8.95□□□□□ -0.98
RIF1-211ENST00000494333 ORC2Q13416 577 aaPredicted RBP8.95□□□□□ -0.98
RIF1-211ENST00000494333 TFDP1Q14186 410 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 CLUL1Q15846 466 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 ARSHQ5FYA8 562 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 GLB1LQ6UWU2 654 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 MAEAQ7L5Y9 396 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 CDH24Q86UP0 819 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 FAM178BQ8IXR5 827 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 CYB5D2Q8WUJ1 264 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 MRPS27Q92552 414 aaKnown RBP8.95□□□□□ -0.98
RIF1-211ENST00000494333 PGBD4Q96DM1 585 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 ZNF558Q96NG5 402 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 MRPL9Q9BYD2 267 aaKnown RBP8.95□□□□□ -0.98
RIF1-211ENST00000494333 TLE6Q9H808 572 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 TUFT1Q9NNX1 390 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 CD320Q9NPF0 282 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 AGPAT5Q9NUQ2 364 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 SPG21Q9NZD8 308 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 NOL7Q9UMY1 257 aaKnown RBP8.95□□□□□ -0.98
RIF1-211ENST00000494333 FAM50BQ9Y247 325 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 PCDHB2Q9Y5E7 798 aa8.95□□□□□ -0.98
RIF1-211ENST00000494333 CUL9Q8IWT3 2517 aa8.94□□□□□ -0.98
RIF1-211ENST00000494333 INO80B-WBP1J3KQ70 363 aa8.94□□□□□ -0.98
RIF1-211ENST00000494333 USO1O60763 962 aaKnown RBP8.94□□□□□ -0.98
RIF1-211ENST00000494333 TBX10O75333 385 aa8.94□□□□□ -0.98
RIF1-211ENST00000494333 OFD1O75665 1012 aa8.94□□□□□ -0.98
RIF1-211ENST00000494333 ERLIN2O94905 339 aa8.94□□□□□ -0.98
RIF1-211ENST00000494333 GLRA2P23416 452 aa8.94□□□□□ -0.98
RIF1-211ENST00000494333 RPA1P27694 616 aa8.94□□□□□ -0.98
RIF1-211ENST00000494333 PPM1AP35813 382 aa8.94□□□□□ -0.98
RIF1-211ENST00000494333 ARL2P36404 184 aa8.94□□□□□ -0.98
RIF1-211ENST00000494333 NASPP49321 788 aaPredicted RBP8.94□□□□□ -0.98
RIF1-211ENST00000494333 TOB1P50616 345 aaPredicted RBP8.94□□□□□ -0.98
RIF1-211ENST00000494333 BCAR1P56945 870 aa8.94□□□□□ -0.98
RIF1-211ENST00000494333 PTENP60484 403 aa8.94□□□□□ -0.98
RIF1-211ENST00000494333 RNASELQ05823 741 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms