RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 MEI4A8MW99 385 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 RGS20O76081 388 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 FCGR1AP12314 374 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 STAT5AP42229 794 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 STAT5BP51692 787 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 ORC2Q13416 577 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-221ENST00000493795 RCN1Q15293 331 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 PCSK7Q16549 785 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 DUOXA2Q1HG44 320 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 CCDC144BQ3MJ40 725 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 ZCCHC8Q6NZY4 707 aaKnown RBP8.18□□□□□ -1.1
BRCA1-221ENST00000493795 IZUMO1Q8IYV9 350 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 KIF2BQ8N4N8 673 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 UBASH3BQ8TF42 649 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 MIEF2Q96C03 454 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 PABPC5Q96DU9 382 aaKnown RBP8.18□□□□□ -1.1
BRCA1-221ENST00000493795 GPR63Q9BZJ6 419 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 COPRSQ9NQ92 184 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 RNF123Q5XPI4 1314 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 FAM220BPB1ANY3 271 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 H3BMM5 538 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 CYP21A2P08686 494 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 CNPP09543 421 aaKnown RBP8.18□□□□□ -1.1
BRCA1-221ENST00000493795 SYCP2LQ5T4T6 812 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 FBXO42Q6P3S6 717 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 TMEM179Q6ZVK1 233 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 VPS33AQ96AX1 596 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 FAM20AQ96MK3 541 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 RMDN3Q96TC7 470 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 HOXC10Q9NYD6 342 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 CRLS1Q9UJA2 301 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 DBR1Q9UK59 544 aaKnown RBP8.18□□□□□ -1.1
BRCA1-221ENST00000493795 ABCB11O95342 1321 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 ERBB4Q15303 1308 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 PRR23AA6NEV1 266 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 CCT8L1PA6NM43 557 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 P4HBP07237 508 aaKnown RBP8.18□□□□□ -1.1
BRCA1-221ENST00000493795 THRAP10827 490 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 SCP2P22307 547 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 OASLQ15646 514 aaKnown RBP8.18□□□□□ -1.1
BRCA1-221ENST00000493795 FAM83EQ2M2I3 478 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 FOXP4Q8IVH2 680 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-221ENST00000493795 SLC7A14Q8TBB6 771 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 S100A13Q99584 98 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 APOL4Q9BPW4 351 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 NOL6Q9H6R4 1146 aaKnown RBP8.18□□□□□ -1.1
BRCA1-221ENST00000493795 SLC40A1Q9NP59 571 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 KLHL1Q9NR64 748 aa8.18□□□□□ -1.1
BRCA1-221ENST00000493795 ZBTB39O15060 712 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 TPST1O60507 370 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 DDHD2O94830 711 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 ATP6V1B2P21281 511 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 WARSP23381 471 aaKnown RBP8.17□□□□□ -1.1
BRCA1-221ENST00000493795 CRKP46108 304 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 TWF1Q12792 350 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 PDK1Q15118 436 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 DDR2Q16832 855 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 TCEAL5Q5H9L2 206 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 TAF2Q6P1X5 1199 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 LRRC71Q8N4P6 559 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 NSUN6Q8TEA1 469 aaKnown RBP8.17□□□□□ -1.1
BRCA1-221ENST00000493795 C18orf8Q96DM3 657 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 UBE2OQ9C0C9 1292 aaKnown RBP8.17□□□□□ -1.1
BRCA1-221ENST00000493795 ZNF624Q9P2J8 865 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-221ENST00000493795 EDC4Q6P2E9 1401 aaKnown RBP8.17□□□□□ -1.1
BRCA1-221ENST00000493795 KIAA0391O15091 583 aaKnown RBP8.17□□□□□ -1.1
BRCA1-221ENST00000493795 HNMTP50135 292 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 PSMD4P55036 377 aaKnown RBP8.17□□□□□ -1.1
BRCA1-221ENST00000493795 PLIN5Q00G26 463 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 OTUD4Q01804 1114 aaKnown RBP8.17□□□□□ -1.1
BRCA1-221ENST00000493795 SPATA4Q8NEY3 305 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 CHAMP1Q96JM3 812 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 TRMT6Q9UJA5 497 aaKnown RBP8.17□□□□□ -1.1
BRCA1-221ENST00000493795 USP21Q9UK80 565 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 SH3BP1Q9Y3L3 701 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 EIF4G3O43432 1585 aaKnown RBP8.17□□□□□ -1.1
BRCA1-221ENST00000493795 FANCAO15360 1455 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 LOC100653049A0A140TA62 436 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 PNMA8CA0A1B0GUJ8 204 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 E2F8A0AVK6 867 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 KRT34O76011 436 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 ZNF24P17028 368 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 PRCPP42785 496 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 CDK8P49336 464 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 PIGHQ14442 188 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-221ENST00000493795 TSNQ15631 228 aaKnown RBP8.17□□□□□ -1.1
BRCA1-221ENST00000493795 PGS1Q32NB8 556 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 NDUFAF6Q330K2 333 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 MAML3Q96JK9 1138 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 C6orf62Q9GZU0 229 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-221ENST00000493795 STK39Q9UEW8 545 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 AGO2Q9UKV8 859 aaKnown RBP8.17□□□□□ -1.1
BRCA1-221ENST00000493795 SLC39A10Q9ULF5 831 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 DUSP12Q9UNI6 340 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 A0A1W2PRG6 482 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 ZBTB5O15062 677 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 BCL10O95999 233 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 PSMB9P28065 219 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 QARSP47897 775 aaKnown RBP8.17□□□□□ -1.1
BRCA1-221ENST00000493795 ATP1A4Q13733 1029 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms