RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 MCAMP43121 646 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 CCL23P55773 120 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 SEPT2Q15019 361 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 ELAVL1Q15717 326 aaKnown RBP5.2□□□□□ -1.58
CLIP4-212ENST00000493551 ABCB5Q2M3G0 1257 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 TMEM31Q5JXX7 168 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 KIAA1755Q5JYT7 1200 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 TMEM240Q5SV17 173 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.2□□□□□ -1.58
CLIP4-212ENST00000493551 KCNV1Q6PIU1 500 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 OLFML1Q6UWY5 402 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 CATSPERGQ6ZRH7 1159 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 C16orf59Q7L2K0 433 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 WDR63Q8IWG1 891 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 THAP3Q8WTV1 239 aaPredicted RBP5.2□□□□□ -1.58
CLIP4-212ENST00000493551 CHMP4CQ96CF2 233 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 MAML3Q96JK9 1138 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 ALG1Q9BT22 464 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 PIH1D3Q9NQM4 214 aaKnown RBP5.2□□□□□ -1.58
CLIP4-212ENST00000493551 STARD7Q9NQZ5 370 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 SMC4Q9NTJ3 1288 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 TRPS1Q9UHF7 1281 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 MSRAQ9UJ68 235 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 ZHX1Q9UKY1 873 aaPredicted RBP5.2□□□□□ -1.58
CLIP4-212ENST00000493551 COX11Q9Y6N1 276 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 SPTBN5Q9NRC6 3674 aaKnown RBP5.19□□□□□ -1.58
CLIP4-212ENST00000493551 A0A1W2PRG0 241 aa5.19□□□□□ -1.58
CLIP4-212ENST00000493551 PROB1E7EW31 1015 aa5.19□□□□□ -1.58
CLIP4-212ENST00000493551 IDH1O75874 414 aaKnown RBP5.19□□□□□ -1.58
CLIP4-212ENST00000493551 FLOT1O75955 427 aa5.19□□□□□ -1.58
CLIP4-212ENST00000493551 CYP2D6P10635 497 aa5.19□□□□□ -1.58
CLIP4-212ENST00000493551 ACLYP53396 1101 aa5.19□□□□□ -1.58
CLIP4-212ENST00000493551 GPR19Q15760 415 aa5.19□□□□□ -1.58
CLIP4-212ENST00000493551 FXNQ16595 210 aa5.19□□□□□ -1.58
CLIP4-212ENST00000493551 CERKLQ49MI3 558 aaPredicted RBP5.19□□□□□ -1.58
CLIP4-212ENST00000493551 FIGNQ5HY92 759 aa5.19□□□□□ -1.58
CLIP4-212ENST00000493551 TTC39AQ5SRH9 613 aa5.19□□□□□ -1.58
CLIP4-212ENST00000493551 HECTD2Q5U5R9 776 aa5.19□□□□□ -1.58
CLIP4-212ENST00000493551 LRRC55Q6ZSA7 311 aa5.19□□□□□ -1.58
CLIP4-212ENST00000493551 RNF180Q86T96 592 aa5.19□□□□□ -1.58
CLIP4-212ENST00000493551 ANKS1AQ92625 1134 aa5.19□□□□□ -1.58
CLIP4-212ENST00000493551 C1QTNF1Q9BXJ1 281 aa5.19□□□□□ -1.58
CLIP4-212ENST00000493551 SPATC1LQ9H0A9 340 aa5.19□□□□□ -1.58
CLIP4-212ENST00000493551 SYNPO2LQ9H987 977 aa5.19□□□□□ -1.58
CLIP4-212ENST00000493551 SLC28A3Q9HAS3 691 aa5.19□□□□□ -1.58
CLIP4-212ENST00000493551 FBXO28Q9NVF7 368 aa5.19□□□□□ -1.58
CLIP4-212ENST00000493551 VWA7Q9Y334 891 aa5.19□□□□□ -1.58
CLIP4-212ENST00000493551 CTDP1Q9Y5B0 961 aaPredicted RBP5.19□□□□□ -1.58
CLIP4-212ENST00000493551 DDX49Q9Y6V7 483 aaKnown RBP5.19□□□□□ -1.58
CLIP4-212ENST00000493551 SYNRGQ9UMZ2 1314 aa5.19□□□□□ -1.58
CLIP4-212ENST00000493551 PRAMEF25A6NGN4 478 aa5.18□□□□□ -1.58
CLIP4-212ENST00000493551 EPOPA6NHQ4 379 aa5.18□□□□□ -1.58
CLIP4-212ENST00000493551 GOLGA6L6A8MZA4 724 aa5.18□□□□□ -1.58
CLIP4-212ENST00000493551 SMIM22K7EJ46 135 aa5.18□□□□□ -1.58
CLIP4-212ENST00000493551 BAG3O95817 575 aa5.18□□□□□ -1.58
CLIP4-212ENST00000493551 MPIG6BO95866 241 aa5.18□□□□□ -1.58
CLIP4-212ENST00000493551 TIMP1P01033 207 aa5.18□□□□□ -1.58
CLIP4-212ENST00000493551 HOXC6P09630 235 aa5.18□□□□□ -1.58
CLIP4-212ENST00000493551 C6orf222P0C671 652 aaPredicted RBP5.18□□□□□ -1.58
CLIP4-212ENST00000493551 GUCY1A2P33402 732 aa5.18□□□□□ -1.58
CLIP4-212ENST00000493551 PLCD1P51178 756 aa5.18□□□□□ -1.58
CLIP4-212ENST00000493551 BEX3Q00994 111 aa5.18□□□□□ -1.58
CLIP4-212ENST00000493551 PPIGQ13427 754 aaKnown RBP eCLIP5.18□□□□□ -1.58
CLIP4-212ENST00000493551 OS9Q13438 667 aaPredicted RBP5.18□□□□□ -1.58
CLIP4-212ENST00000493551 AKNAD1Q5T1N1 836 aa5.18□□□□□ -1.58
CLIP4-212ENST00000493551 ARHGAP36Q6ZRI8 547 aa5.18□□□□□ -1.58
CLIP4-212ENST00000493551 NOL8Q76FK4 1167 aaKnown RBP5.18□□□□□ -1.58
CLIP4-212ENST00000493551 FOXP4Q8IVH2 680 aaPredicted RBP5.18□□□□□ -1.58
CLIP4-212ENST00000493551 ARNTL2Q8WYA1 636 aa5.18□□□□□ -1.58
CLIP4-212ENST00000493551 SCLYQ96I15 445 aa5.18□□□□□ -1.58
CLIP4-212ENST00000493551 C12orf42Q96LP6 360 aa5.18□□□□□ -1.58
CLIP4-212ENST00000493551 AMNQ9BXJ7 453 aa5.18□□□□□ -1.58
CLIP4-212ENST00000493551 DHX36Q9H2U1 1008 aaKnown RBP5.18□□□□□ -1.58
CLIP4-212ENST00000493551 CABP5Q9NP86 173 aa5.18□□□□□ -1.58
CLIP4-212ENST00000493551 TNNQ9UQP3 1299 aa5.18□□□□□ -1.58
CLIP4-212ENST00000493551 PTPRCP08575 1304 aa5.18□□□□□ -1.58
CLIP4-212ENST00000493551 LAMA2P24043 3122 aaKnown RBP5.17□□□□□ -1.58
CLIP4-212ENST00000493551 CACNA1FO60840 1977 aa5.17□□□□□ -1.58
CLIP4-212ENST00000493551 E9PSI1 815 aa5.17□□□□□ -1.58
CLIP4-212ENST00000493551 ADCY6O43306 1168 aa5.17□□□□□ -1.58
CLIP4-212ENST00000493551 CA3P07451 260 aa5.17□□□□□ -1.58
CLIP4-212ENST00000493551 FCER1AP12319 257 aa5.17□□□□□ -1.58
CLIP4-212ENST00000493551 SHMT1P34896 483 aa5.17□□□□□ -1.58
CLIP4-212ENST00000493551 STAT3P40763 770 aa5.17□□□□□ -1.58
CLIP4-212ENST00000493551 ADCY7P51828 1080 aa5.17□□□□□ -1.58
CLIP4-212ENST00000493551 USP14P54578 494 aa5.17□□□□□ -1.58
CLIP4-212ENST00000493551 PSMC6P62333 389 aa5.17□□□□□ -1.58
CLIP4-212ENST00000493551 HSP90AA2PQ14568 343 aaPredicted RBP5.17□□□□□ -1.58
CLIP4-212ENST00000493551 COG2Q14746 738 aa5.17□□□□□ -1.58
CLIP4-212ENST00000493551 TMEM132BQ14DG7 1078 aa5.17□□□□□ -1.58
CLIP4-212ENST00000493551 RAB30Q15771 203 aa5.17□□□□□ -1.58
CLIP4-212ENST00000493551 NTRK3Q16288 839 aa5.17□□□□□ -1.58
CLIP4-212ENST00000493551 MFSD5Q6N075 450 aa5.17□□□□□ -1.58
CLIP4-212ENST00000493551 FAM111BQ6SJ93 734 aa5.17□□□□□ -1.58
CLIP4-212ENST00000493551 LRSAM1Q6UWE0 723 aa5.17□□□□□ -1.58
CLIP4-212ENST00000493551 ATF7IPQ6VMQ6 1270 aa5.17□□□□□ -1.58
CLIP4-212ENST00000493551 EP400NLQ6ZTU2 488 aa5.17□□□□□ -1.58
CLIP4-212ENST00000493551 HTR3DQ70Z44 454 aa5.17□□□□□ -1.58
CLIP4-212ENST00000493551 RD3Q7Z3Z2 195 aa5.17□□□□□ -1.58
CLIP4-212ENST00000493551 TMCO2Q7Z6W1 182 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms