RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 BRWD3Q6RI45 1802 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 WASHC2CQ9Y4E1 1318 aa4.27□□□□□ -1.73
PTCD3-218ENST00000493430 ASXL1Q8IXJ9 1541 aa4.27□□□□□ -1.73
PTCD3-218ENST00000493430 NLRP1Q9C000 1473 aa4.27□□□□□ -1.73
PTCD3-218ENST00000493430 DNAJC9-AS1A6NH13 148 aa4.27□□□□□ -1.73
PTCD3-218ENST00000493430 SLC6A4P31645 630 aa4.27□□□□□ -1.73
PTCD3-218ENST00000493430 GRIA3P42263 894 aa4.27□□□□□ -1.73
PTCD3-218ENST00000493430 ERVK-21P61565 698 aa4.27□□□□□ -1.73
PTCD3-218ENST00000493430 PABPC1LQ4VXU2 614 aaKnown RBP4.27□□□□□ -1.73
PTCD3-218ENST00000493430 ZNF788Q6ZQV5 615 aa4.27□□□□□ -1.73
PTCD3-218ENST00000493430 KRT26Q7Z3Y9 468 aa4.27□□□□□ -1.73
PTCD3-218ENST00000493430 TOR1AIP2Q8NFQ8 470 aa4.27□□□□□ -1.73
PTCD3-218ENST00000493430 SLC30A5Q8TAD4 765 aa4.27□□□□□ -1.73
PTCD3-218ENST00000493430 SSH1Q8WYL5 1049 aa4.27□□□□□ -1.73
PTCD3-218ENST00000493430 SMG7Q92540 1137 aaKnown RBP4.27□□□□□ -1.73
PTCD3-218ENST00000493430 PGBD1Q96JS3 809 aa4.27□□□□□ -1.73
PTCD3-218ENST00000493430 TLR10Q9BXR5 811 aa4.27□□□□□ -1.73
PTCD3-218ENST00000493430 TDP1Q9NUW8 608 aa4.27□□□□□ -1.73
PTCD3-218ENST00000493430 CDYLQ9Y232 598 aa4.27□□□□□ -1.73
PTCD3-218ENST00000493430 TMA7Q9Y2S6 64 aaKnown RBP4.27□□□□□ -1.73
PTCD3-218ENST00000493430 KNDC1Q76NI1 1749 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 COL3A1P02461 1466 aaPredicted RBP4.26□□□□□ -1.73
PTCD3-218ENST00000493430 K7ESF4 209 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 GRM6O15303 877 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 CLSTN1O94985 981 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 ERBB2P04626 1255 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 GATA3P23771 443 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 MAPK10P53779 464 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 SOX10P56693 466 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 KLF1Q13351 362 aaPredicted RBP4.26□□□□□ -1.73
PTCD3-218ENST00000493430 DYRK1AQ13627 763 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 PTPRRQ15256 657 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 CLUL1Q15846 466 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 CD300EQ496F6 205 aaPredicted RBP4.26□□□□□ -1.73
PTCD3-218ENST00000493430 TSTD2Q5T7W7 516 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 TSHZ1Q6ZSZ6 1077 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 MIGA2Q7L4E1 593 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 PTF1AQ7RTS3 328 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 PEG10Q86TG7 708 aaKnown RBP4.26□□□□□ -1.73
PTCD3-218ENST00000493430 DCBLD1Q8N8Z6 715 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 IL17RDQ8NFM7 739 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 ATL2Q8NHH9 583 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 COG1Q8WTW3 980 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 TFAP2BQ92481 460 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 SARAFQ96BY9 339 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 TMX3Q96JJ7 454 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 JKAMPQ9P055 326 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 RNF7Q9UBF6 113 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 RGPD5Q99666 1765 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 ANKRD50Q9ULJ7 1429 aa4.26□□□□□ -1.73
PTCD3-218ENST00000493430 ARHGEF28Q8N1W1 1705 aaKnown RBP4.26□□□□□ -1.73
PTCD3-218ENST00000493430 MED14O60244 1454 aa4.25□□□□□ -1.73
PTCD3-218ENST00000493430 TRIM75PA6NK02 468 aa4.25□□□□□ -1.73
PTCD3-218ENST00000493430 ZFYVE9O95405 1425 aa4.25□□□□□ -1.73
PTCD3-218ENST00000493430 VIL1P09327 827 aaKnown RBP4.25□□□□□ -1.73
PTCD3-218ENST00000493430 NOS1P29475 1434 aa4.25□□□□□ -1.73
PTCD3-218ENST00000493430 ANXA11P50995 505 aaKnown RBP4.25□□□□□ -1.73
PTCD3-218ENST00000493430 CDC42EP1Q00587 391 aa4.25□□□□□ -1.73
PTCD3-218ENST00000493430 PREPLQ4J6C6 727 aaPredicted RBP4.25□□□□□ -1.73
PTCD3-218ENST00000493430 KIAA1614Q5VZ46 1190 aa4.25□□□□□ -1.73
PTCD3-218ENST00000493430 SDE2Q6IQ49 451 aa4.25□□□□□ -1.73
PTCD3-218ENST00000493430 LPIN2Q92539 896 aa4.25□□□□□ -1.73
PTCD3-218ENST00000493430 PACSIN1Q9BY11 444 aa4.25□□□□□ -1.73
PTCD3-218ENST00000493430 FMN2Q9NZ56 1722 aa4.25□□□□□ -1.73
PTCD3-218ENST00000493430 CTTNBP2NLQ9P2B4 639 aa4.25□□□□□ -1.73
PTCD3-218ENST00000493430 PCDHA13Q9Y5I0 950 aa4.25□□□□□ -1.73
PTCD3-218ENST00000493430 SHPRHQ149N8 1683 aa4.25□□□□□ -1.73
PTCD3-218ENST00000493430 TRPM2O94759 1503 aa4.25□□□□□ -1.73
PTCD3-218ENST00000493430 CPS1P31327 1500 aa4.25□□□□□ -1.73
PTCD3-218ENST00000493430 USP32Q8NFA0 1604 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 CRYBG1Q9Y4K1 1723 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 CCDC195A0A1B0GUA6 201 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 CGB1A6NKQ9 187 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 ADM5C9JUS6 153 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 SLC43A1O75387 559 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 SUN1O94901 812 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 CHRM2P08172 466 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 SBK3P0C264 359 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 PROK1P58294 105 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 TARDBPQ13148 414 aaKnown RBP eCLIP4.24□□□□□ -1.73
PTCD3-218ENST00000493430 MICALCLQ6ZW33 695 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 ADGRG5Q8IZF4 528 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 AOPEPQ8N6M6 819 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 IFI44Q8TCB0 444 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 HASPINQ8TF76 798 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 SCARB1Q8WTV0 552 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 SNX19Q92543 992 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 RAB24Q969Q5 203 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 HDAC10Q969S8 669 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 KLHL32Q96NJ5 620 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 VSX1Q9NZR4 365 aaPredicted RBP4.24□□□□□ -1.73
PTCD3-218ENST00000493430 ANKRD30AQ9BXX3 1397 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 DISP3Q9P2K9 1392 aa4.24□□□□□ -1.73
PTCD3-218ENST00000493430 DIP2AQ14689 1571 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 PLCH1Q4KWH8 1693 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 NAIPQ13075 1403 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 PTPRUQ92729 1446 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 RRBP1Q9P2E9 1410 aaKnown RBP4.23□□□□□ -1.73
PTCD3-218ENST00000493430 RIMS2Q9UQ26 1411 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 MANSC4A6NHS7 340 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms