RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 ERVFC1P60507 584 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 GCNT1Q02742 428 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 CTXN3Q4LDR2 81 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 ZNF394Q53GI3 561 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 TMEM31Q5JXX7 168 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 PLPP4Q5VZY2 271 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 DPH6Q7L8W6 267 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 GLYCTKQ8IVS8 523 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 VSTM4Q8IW00 320 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 THEM5Q8N1Q8 247 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 TMEM86AQ8N2M4 240 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 TCF25Q9BQ70 676 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 ZBP1Q9H171 429 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 TLR9Q9NR96 1032 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 DDX43Q9NXZ2 648 aaKnown RBP18.36■□□□□ 0.53
LIME1-208ENST00000493265 HMGXB4Q9UGU5 601 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 HCN4Q9Y3Q4 1203 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 PCDHGC5Q9Y5F6 944 aa18.36■□□□□ 0.53
LIME1-208ENST00000493265 TACC1O75410 805 aa18.35■□□□□ 0.53
LIME1-208ENST00000493265 CXCL14O95715 111 aa18.35■□□□□ 0.53
LIME1-208ENST00000493265 CYP11A1P05108 521 aa18.35■□□□□ 0.53
LIME1-208ENST00000493265 WARSP23381 471 aaKnown RBP18.35■□□□□ 0.53
LIME1-208ENST00000493265 NDST1P52848 882 aa18.35■□□□□ 0.53
LIME1-208ENST00000493265 YWHAEP62258 255 aaKnown RBP18.35■□□□□ 0.53
LIME1-208ENST00000493265 DRAP1Q14919 205 aaPredicted RBP18.35■□□□□ 0.53
LIME1-208ENST00000493265 PSMD5Q16401 504 aa18.35■□□□□ 0.53
LIME1-208ENST00000493265 SPECC1LQ69YQ0 1117 aa18.35■□□□□ 0.53
LIME1-208ENST00000493265 ENOSF1Q7L5Y1 443 aa18.35■□□□□ 0.53
LIME1-208ENST00000493265 LIMS2Q7Z4I7 341 aa18.35■□□□□ 0.53
LIME1-208ENST00000493265 RNF168Q8IYW5 571 aaPredicted RBP18.35■□□□□ 0.53
LIME1-208ENST00000493265 MRFAP1L1Q96HT8 127 aa18.35■□□□□ 0.53
LIME1-208ENST00000493265 SPAG5Q96R06 1193 aa18.35■□□□□ 0.53
LIME1-208ENST00000493265 CD320Q9NPF0 282 aa18.35■□□□□ 0.53
LIME1-208ENST00000493265 MRPL17Q9NRX2 175 aaKnown RBP18.35■□□□□ 0.53
LIME1-208ENST00000493265 CHST7Q9NS84 486 aa18.35■□□□□ 0.53
LIME1-208ENST00000493265 LZTS1Q9Y250 596 aa18.35■□□□□ 0.53
LIME1-208ENST00000493265 TSC2P49815 1807 aa18.35■□□□□ 0.53
LIME1-208ENST00000493265 VWA8A3KMH1 1905 aa18.34■□□□□ 0.53
LIME1-208ENST00000493265 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.34■□□□□ 0.53
LIME1-208ENST00000493265 H7C4K7 107 aa18.34■□□□□ 0.53
LIME1-208ENST00000493265 KCNA5P22460 613 aa18.34■□□□□ 0.53
LIME1-208ENST00000493265 LHX1P48742 406 aa18.34■□□□□ 0.53
LIME1-208ENST00000493265 PSMC1P62191 440 aaKnown RBP18.34■□□□□ 0.53
LIME1-208ENST00000493265 DSG1Q02413 1049 aa18.34■□□□□ 0.53
LIME1-208ENST00000493265 UBE3AQ05086 875 aa18.34■□□□□ 0.53
LIME1-208ENST00000493265 KIAA0319Q5VV43 1072 aa18.34■□□□□ 0.53
LIME1-208ENST00000493265 ZNF280DQ6N043 979 aa18.34■□□□□ 0.53
LIME1-208ENST00000493265 TMEM270Q6UE05 265 aa18.34■□□□□ 0.53
LIME1-208ENST00000493265 ANKS3Q6ZW76 656 aa18.34■□□□□ 0.53
LIME1-208ENST00000493265 PPFIBP1Q86W92 1011 aa18.34■□□□□ 0.53
LIME1-208ENST00000493265 LNX1Q8TBB1 728 aaPredicted RBP18.34■□□□□ 0.53
LIME1-208ENST00000493265 FAM81BQ96LP2 452 aa18.34■□□□□ 0.53
LIME1-208ENST00000493265 TMEM209Q96SK2 561 aa18.34■□□□□ 0.53
LIME1-208ENST00000493265 LPIN3Q9BQK8 851 aa18.34■□□□□ 0.53
LIME1-208ENST00000493265 DPEP3Q9H4B8 488 aa18.34■□□□□ 0.53
LIME1-208ENST00000493265 CEP72Q9P209 647 aa18.34■□□□□ 0.53
LIME1-208ENST00000493265 STK39Q9UEW8 545 aa18.34■□□□□ 0.53
LIME1-208ENST00000493265 BARX2Q9UMQ3 279 aaPredicted RBP18.34■□□□□ 0.53
LIME1-208ENST00000493265 NME7Q9Y5B8 376 aa18.34■□□□□ 0.53
LIME1-208ENST00000493265 ITIH6Q6UXX5 1313 aa18.33■□□□□ 0.53
LIME1-208ENST00000493265 FOXN3O00409 490 aaPredicted RBP18.33■□□□□ 0.52
LIME1-208ENST00000493265 ATP2C2O75185 946 aa18.33■□□□□ 0.52
LIME1-208ENST00000493265 CALCAP01258 141 aa18.33■□□□□ 0.52
LIME1-208ENST00000493265 OR4Q2P0C623 313 aa18.33■□□□□ 0.52
LIME1-208ENST00000493265 CTSAP10619 480 aa18.33■□□□□ 0.52
LIME1-208ENST00000493265 ACO1P21399 889 aaKnown RBP18.33■□□□□ 0.52
LIME1-208ENST00000493265 RFX1P22670 979 aa18.33■□□□□ 0.52
LIME1-208ENST00000493265 IRS1P35568 1242 aa18.33■□□□□ 0.52
LIME1-208ENST00000493265 BMS1Q14692 1282 aaKnown RBP18.33■□□□□ 0.52
LIME1-208ENST00000493265 PTPN14Q15678 1187 aa18.33■□□□□ 0.52
LIME1-208ENST00000493265 ACOT1Q86TX2 421 aa18.33■□□□□ 0.52
LIME1-208ENST00000493265 SPC24Q8NBT2 197 aa18.33■□□□□ 0.52
LIME1-208ENST00000493265 RBBP8NLQ8NC74 664 aaPredicted RBP18.33■□□□□ 0.52
LIME1-208ENST00000493265 OR10T2Q8NGX3 314 aa18.33■□□□□ 0.52
LIME1-208ENST00000493265 PIK3R5Q8WYR1 880 aa18.33■□□□□ 0.52
LIME1-208ENST00000493265 FAXDC2Q96IV6 333 aa18.33■□□□□ 0.52
LIME1-208ENST00000493265 TWNKQ96RR1 684 aa18.33■□□□□ 0.52
LIME1-208ENST00000493265 RTP3Q9BQQ7 232 aa18.33■□□□□ 0.52
LIME1-208ENST00000493265 SYT15Q9BQS2 421 aa18.33■□□□□ 0.52
LIME1-208ENST00000493265 NUP58Q9BVL2 599 aa18.33■□□□□ 0.52
LIME1-208ENST00000493265 NAA15Q9BXJ9 866 aaKnown RBP18.33■□□□□ 0.52
LIME1-208ENST00000493265 STK33Q9BYT3 514 aa18.33■□□□□ 0.52
LIME1-208ENST00000493265 ELOVL4Q9GZR5 314 aa18.33■□□□□ 0.52
LIME1-208ENST00000493265 C11orf16Q9NQ32 467 aa18.33■□□□□ 0.52
LIME1-208ENST00000493265 FBXL5Q9UKA1 691 aa18.33■□□□□ 0.52
LIME1-208ENST00000493265 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.33■□□□□ 0.52
LIME1-208ENST00000493265 RNF225M0QZC1 329 aaPredicted RBP18.32■□□□□ 0.52
LIME1-208ENST00000493265 GABRDO14764 452 aa18.32■□□□□ 0.52
LIME1-208ENST00000493265 CILPO75339 1184 aa18.32■□□□□ 0.52
LIME1-208ENST00000493265 GFPT2O94808 682 aa18.32■□□□□ 0.52
LIME1-208ENST00000493265 OAZ2O95190 189 aa18.32■□□□□ 0.52
LIME1-208ENST00000493265 PCSK1P29120 753 aa18.32■□□□□ 0.52
LIME1-208ENST00000493265 ARID5AQ03989 594 aa18.32■□□□□ 0.52
LIME1-208ENST00000493265 GOLGA8FQ08AF8 430 aa18.32■□□□□ 0.52
LIME1-208ENST00000493265 GOLGA8DPQ0D2H9 430 aa18.32■□□□□ 0.52
LIME1-208ENST00000493265 INCA1Q0VD86 236 aa18.32■□□□□ 0.52
LIME1-208ENST00000493265 CAMK1Q14012 370 aa18.32■□□□□ 0.52
LIME1-208ENST00000493265 SMC1AQ14683 1233 aaKnown RBP18.32■□□□□ 0.52
LIME1-208ENST00000493265 CCDC142Q17RM4 750 aa18.32■□□□□ 0.52
LIME1-208ENST00000493265 RSPO2Q6UXX9 243 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms