RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 BFSP1Q12934 665 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 VEPH1Q14D04 833 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 LMBRD2Q68DH5 695 aaPredicted RBP18.59■□□□□ 0.57
SGMS1-204ENST00000492601 SHC4Q6S5L8 630 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 ARID3BQ8IVW6 561 aaPredicted RBP18.59■□□□□ 0.57
SGMS1-204ENST00000492601 HSCBQ8IWL3 235 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 YAF2Q8IY57 180 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 GPD1LQ8N335 351 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 CSGALNACT2Q8N6G5 542 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 GIPC2Q8TF65 315 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 DEPDC1BQ8WUY9 529 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 NELL2Q99435 816 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 TRIM9Q9C026 710 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 LRRC27Q9C0I9 530 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 KBTBD4Q9NVX7 518 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 GPR179Q6PRD1 2367 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 NCAM2O15394 837 aa18.58■□□□□ 0.56
SGMS1-204ENST00000492601 CYP4F8P98187 520 aa18.58■□□□□ 0.56
SGMS1-204ENST00000492601 TSPY1Q01534 308 aa18.58■□□□□ 0.56
SGMS1-204ENST00000492601 TAF12Q16514 161 aa18.58■□□□□ 0.56
SGMS1-204ENST00000492601 GPR158Q5T848 1215 aa18.58■□□□□ 0.56
SGMS1-204ENST00000492601 STXBP4Q6ZWJ1 553 aa18.58■□□□□ 0.56
SGMS1-204ENST00000492601 DCP1BQ8IZD4 617 aaKnown RBP18.58■□□□□ 0.56
SGMS1-204ENST00000492601 PDCL2Q8N4E4 241 aa18.58■□□□□ 0.56
SGMS1-204ENST00000492601 SPRYD3Q8NCJ5 442 aa18.58■□□□□ 0.56
SGMS1-204ENST00000492601 SPPL2BQ8TCT7 592 aa18.58■□□□□ 0.56
SGMS1-204ENST00000492601 CLDN23Q96B33 292 aa18.58■□□□□ 0.56
SGMS1-204ENST00000492601 MKNK1Q9BUB5 465 aa18.58■□□□□ 0.56
SGMS1-204ENST00000492601 MTMR12Q9C0I1 747 aa18.58■□□□□ 0.56
SGMS1-204ENST00000492601 CUEDC2Q9H467 287 aa18.58■□□□□ 0.56
SGMS1-204ENST00000492601 TMLHEQ9NVH6 421 aa18.58■□□□□ 0.56
SGMS1-204ENST00000492601 L1RE1Q9UN81 338 aa18.58■□□□□ 0.56
SGMS1-204ENST00000492601 PIAS3Q9Y6X2 628 aa18.58■□□□□ 0.56
SGMS1-204ENST00000492601 PTPRDP23468 1912 aa18.58■□□□□ 0.56
SGMS1-204ENST00000492601 MAN2B1O00754 1011 aa18.57■□□□□ 0.56
SGMS1-204ENST00000492601 HUS1O60921 280 aa18.57■□□□□ 0.56
SGMS1-204ENST00000492601 FGF19O95750 216 aa18.57■□□□□ 0.56
SGMS1-204ENST00000492601 LMNAP02545 664 aaKnown RBP18.57■□□□□ 0.56
SGMS1-204ENST00000492601 TMEM191BP0C7N4 346 aa18.57■□□□□ 0.56
SGMS1-204ENST00000492601 ZSCAN22P10073 491 aaPredicted RBP18.57■□□□□ 0.56
SGMS1-204ENST00000492601 HAPLN1P10915 354 aaPredicted RBP18.57■□□□□ 0.56
SGMS1-204ENST00000492601 ACAT1P24752 427 aaKnown RBP18.57■□□□□ 0.56
SGMS1-204ENST00000492601 HOXD13P35453 343 aa18.57■□□□□ 0.56
SGMS1-204ENST00000492601 MAGEA9P43362 315 aa18.57■□□□□ 0.56
SGMS1-204ENST00000492601 AMPD3Q01432 767 aa18.57■□□□□ 0.56
SGMS1-204ENST00000492601 CSTF1Q05048 431 aaKnown RBP18.57■□□□□ 0.56
SGMS1-204ENST00000492601 FZD5Q13467 585 aa18.57■□□□□ 0.56
SGMS1-204ENST00000492601 ARHGAP15Q53QZ3 475 aa18.57■□□□□ 0.56
SGMS1-204ENST00000492601 ZC3H14Q6PJT7 736 aaKnown RBP18.57■□□□□ 0.56
SGMS1-204ENST00000492601 IQUBQ8NA54 791 aa18.57■□□□□ 0.56
SGMS1-204ENST00000492601 CXorf38Q8TB03 319 aa18.57■□□□□ 0.56
SGMS1-204ENST00000492601 C2orf15Q8WU43 125 aaKnown RBP18.57■□□□□ 0.56
SGMS1-204ENST00000492601 E2F7Q96AV8 911 aa18.57■□□□□ 0.56
SGMS1-204ENST00000492601 PI4K2AQ9BTU6 479 aa18.57■□□□□ 0.56
SGMS1-204ENST00000492601 TRPV5Q9NQA5 729 aa18.57■□□□□ 0.56
SGMS1-204ENST00000492601 SIX4Q9UIU6 781 aa18.57■□□□□ 0.56
SGMS1-204ENST00000492601 ITGA11Q9UKX5 1188 aa18.57■□□□□ 0.56
SGMS1-204ENST00000492601 PCDHB5Q9Y5E4 795 aa18.57■□□□□ 0.56
SGMS1-204ENST00000492601 PTPRJQ12913 1337 aa18.56■□□□□ 0.56
SGMS1-204ENST00000492601 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.56■□□□□ 0.56
SGMS1-204ENST00000492601 DPYSL4O14531 572 aa18.56■□□□□ 0.56
SGMS1-204ENST00000492601 POLR2DO15514 142 aaKnown RBP18.56■□□□□ 0.56
SGMS1-204ENST00000492601 F13A1P00488 732 aa18.56■□□□□ 0.56
SGMS1-204ENST00000492601 CASP1P29466 404 aa18.56■□□□□ 0.56
SGMS1-204ENST00000492601 RPS9P46781 194 aaKnown RBP18.56■□□□□ 0.56
SGMS1-204ENST00000492601 GPR15P49685 360 aa18.56■□□□□ 0.56
SGMS1-204ENST00000492601 RBP5P82980 135 aa18.56■□□□□ 0.56
SGMS1-204ENST00000492601 SMARCB1Q12824 385 aa18.56■□□□□ 0.56
SGMS1-204ENST00000492601 CBWD2Q8IUF1 395 aa18.56■□□□□ 0.56
SGMS1-204ENST00000492601 LRRC52Q8N7C0 313 aa18.56■□□□□ 0.56
SGMS1-204ENST00000492601 STKLD1Q8NE28 680 aa18.56■□□□□ 0.56
SGMS1-204ENST00000492601 CSGALNACT1Q8TDX6 532 aa18.56■□□□□ 0.56
SGMS1-204ENST00000492601 FAM3CQ92520 227 aa18.56■□□□□ 0.56
SGMS1-204ENST00000492601 LRRC3BQ96PB8 259 aa18.56■□□□□ 0.56
SGMS1-204ENST00000492601 GCNAQ96QF7 691 aa18.56■□□□□ 0.56
SGMS1-204ENST00000492601 SEMA4AQ9H3S1 761 aa18.56■□□□□ 0.56
SGMS1-204ENST00000492601 IL21Q9HBE4 155 aa18.56■□□□□ 0.56
SGMS1-204ENST00000492601 DDX43Q9NXZ2 648 aaKnown RBP18.56■□□□□ 0.56
SGMS1-204ENST00000492601 HSPBP1Q9NZL4 362 aa18.56■□□□□ 0.56
SGMS1-204ENST00000492601 FBXO4Q9UKT5 387 aa18.56■□□□□ 0.56
SGMS1-204ENST00000492601 SNX9Q9Y5X1 595 aa18.56■□□□□ 0.56
SGMS1-204ENST00000492601 DMXL1Q9Y485 3027 aa18.55■□□□□ 0.56
SGMS1-204ENST00000492601 ZNF233A6NK53 670 aa18.55■□□□□ 0.56
SGMS1-204ENST00000492601 ARNTLO00327 626 aa18.55■□□□□ 0.56
SGMS1-204ENST00000492601 CHADO15335 359 aa18.55■□□□□ 0.56
SGMS1-204ENST00000492601 HCRTO43612 131 aa18.55■□□□□ 0.56
SGMS1-204ENST00000492601 PRPF40AO75400 957 aaKnown RBP18.55■□□□□ 0.56
SGMS1-204ENST00000492601 PRAMEF12O95522 483 aa18.55■□□□□ 0.56
SGMS1-204ENST00000492601 CCNE1P24864 410 aa18.55■□□□□ 0.56
SGMS1-204ENST00000492601 CDC25CP30307 473 aa18.55■□□□□ 0.56
SGMS1-204ENST00000492601 ME1P48163 572 aa18.55■□□□□ 0.56
SGMS1-204ENST00000492601 SOX9P48436 509 aa18.55■□□□□ 0.56
SGMS1-204ENST00000492601 MTAPQ13126 283 aa18.55■□□□□ 0.56
SGMS1-204ENST00000492601 FAM26FQ5R3K3 315 aa18.55■□□□□ 0.56
SGMS1-204ENST00000492601 SDHAF4Q5VUM1 108 aa18.55■□□□□ 0.56
SGMS1-204ENST00000492601 TSSK4Q6SA08 328 aa18.55■□□□□ 0.56
SGMS1-204ENST00000492601 OSTM1Q86WC4 334 aa18.55■□□□□ 0.56
SGMS1-204ENST00000492601 ZNF687Q8N1G0 1237 aa18.55■□□□□ 0.56
SGMS1-204ENST00000492601 OR5B17Q8NGF7 314 aa18.55■□□□□ 0.56
SGMS1-204ENST00000492601 TTC8Q8TAM2 541 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms