RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 LMBRD1Q9NUN5 540 aa7.72□□□□□ -1.17
PDLIM1-204ENST00000492511 DDX43Q9NXZ2 648 aaKnown RBP7.72□□□□□ -1.17
PDLIM1-204ENST00000492511 EPS15L1Q9UBC2 864 aa7.72□□□□□ -1.17
PDLIM1-204ENST00000492511 POLIQ9UNA4 740 aa7.72□□□□□ -1.17
PDLIM1-204ENST00000492511 YIPF1Q9Y548 306 aa7.72□□□□□ -1.17
PDLIM1-204ENST00000492511 WDFY4Q6ZS81 3184 aa7.71□□□□□ -1.17
PDLIM1-204ENST00000492511 MYBPHLA2RUH7 354 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 ANHXE9PGG2 379 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 BIN1O00499 593 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 IKBKBO14920 756 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 ATP2C2O75185 946 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 LRG1P02750 347 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 TRIM49P0CI25 452 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 TRIM49CP0CI26 452 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 HAPLN1P10915 354 aaPredicted RBP7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 ATF6P18850 670 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 WARSP23381 471 aaKnown RBP7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 GBP2P32456 591 aaPredicted RBP7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 PSMC2P35998 433 aaKnown RBP7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 LHX1P48742 406 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 VAMP7P51809 220 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 AP3M2P53677 418 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 EPHA5P54756 1037 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 CDH8P55286 799 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 MYO1EQ12965 1108 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 NCOA4Q13772 614 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 CAMK4Q16566 473 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 WDR72Q3MJ13 1102 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 PABPC1LQ4VXU2 614 aaKnown RBP7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 INTS6LQ5JSJ4 861 aaKnown RBP7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 FAM171BQ6P995 826 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 TMC8Q8IU68 726 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 FAM186BQ8IYM0 893 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 ADGRF2Q8IZF7 708 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 SPATA18Q8TC71 538 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 FGF13Q92913 245 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 ACSF2Q96CM8 615 aaPredicted RBP7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 PRRX2Q99811 253 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 LPIN3Q9BQK8 851 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 CORO1BQ9BR76 489 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 SDCBP2Q9H190 292 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 KCNK12Q9HB15 430 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 ZNF334Q9HCZ1 680 aaPredicted RBP7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 CRTAC1Q9NQ79 661 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 HSFX1Q9UBD0 423 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 HOOK1Q9UJC3 728 aaKnown RBP7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 GTF3C4Q9UKN8 822 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 CDH7Q9ULB5 785 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 FRMD4BQ9Y2L6 1034 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 SCN1AP35498 2009 aa7.71□□□□□ -1.18
PDLIM1-204ENST00000492511 CETN3O15182 167 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 NARSO43776 548 aaKnown RBP7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 PHACTR2O75167 634 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 TACC1O75410 805 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 HLA-DRAP01903 254 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 PDGFRBP09619 1106 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 FAM163BP0C2L3 166 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 GJA1P17302 382 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 CEBPBP17676 345 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 CCNE1P24864 410 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 RPL13P26373 211 aaKnown RBP7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 ATICP31939 592 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 GCLMP48507 274 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 GPR15P49685 360 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 NHLH1Q02575 133 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 ENPEPQ07075 957 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 BIRC3Q13489 604 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 TRPC3Q13507 836 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 HTR4Q13639 388 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 SPOPLQ6IQ16 392 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 TTI2Q6NXR4 508 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 PARM1Q6UWI2 310 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 TRIM67Q6ZTA4 783 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 INTS8Q75QN2 995 aaKnown RBP7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 DNAJB7Q7Z6W7 309 aaPredicted RBP7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 NPAS3Q8IXF0 933 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 DCP1BQ8IZD4 617 aaKnown RBP7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 SLC44A3Q8N4M1 653 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 TAS1R2Q8TE23 839 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 C2orf15Q8WU43 125 aaKnown RBP7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 ING5Q8WYH8 240 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 SEMA4DQ92854 862 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 FGF14Q92915 247 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 SYAP1Q96A49 352 aaPredicted RBP7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 MCRS1Q96EZ8 462 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 ASIC4Q96FT7 647 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 DHTKD1Q96HY7 919 aaPredicted RBP7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 ZNF512Q96ME7 567 aaPredicted RBP7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 ZSWIM3Q96MP5 696 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 MED15Q96RN5 788 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 MMS19Q96T76 1030 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 PI4K2AQ9BTU6 479 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 MKNK1Q9BUB5 465 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 DPEP3Q9H4B8 488 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 SMYD3Q9H7B4 428 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 APOBEC3GQ9HC16 384 aaKnown RBP7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 KIAA1468Q9P260 1216 aa7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 NXF1Q9UBU9 619 aaKnown RBP7.7□□□□□ -1.18
PDLIM1-204ENST00000492511 SORCS3Q9UPU3 1222 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms