RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 WDR49Q8IV35 697 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 HAUS1Q96CS2 278 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 WRNIP1Q96S55 665 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 PCYT2Q99447 389 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 PITPNM3Q9BZ71 974 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 KIF9Q9HAQ2 790 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 ARHGEF3Q9NR81 526 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 POC1B-GALNT4F8VUJ3 575 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 ALOX15BO15296 676 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 ITGAVP06756 1048 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 SLC18A1P54219 525 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 STXBP2Q15833 593 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 PKN2Q16513 984 aaKnown RBP17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 DCAF15Q66K64 600 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 FAM47EQ6ZV65 393 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 KIF2BQ8N4N8 673 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 NIPA2Q8N8Q9 360 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 TMEM35BQ8NCS4 154 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 KLHL29Q96CT2 875 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 TBC1D31Q96DN5 1066 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 MTMR12Q9C0I1 747 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 TRABDQ9H4I3 376 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 CISHQ9NSE2 258 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 KRT16P08779 473 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 IBSPP21815 317 aaPredicted RBP17■□□□□ 0.31
SEMA4D-220ENST00000492386 RFC5P40937 340 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 AP3M2P53677 418 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 CCDC15Q0P6D6 951 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 PIGHQ14442 188 aaPredicted RBP17■□□□□ 0.31
SEMA4D-220ENST00000492386 GPAT2Q6NUI2 795 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 ZPBP2Q6X784 338 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 TFAP2BQ92481 460 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 PRCCQ92733 491 aaPredicted RBP17■□□□□ 0.31
SEMA4D-220ENST00000492386 PAIP2Q9BPZ3 127 aaKnown RBP17■□□□□ 0.31
SEMA4D-220ENST00000492386 TMEM121Q9BTD3 319 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 SHOC2Q9UQ13 582 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 LRRD1A4D1F6 860 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 C3orf70A6NLC5 250 aaPredicted RBP17■□□□□ 0.31
SEMA4D-220ENST00000492386 CCNB1P14635 433 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 RPS12P25398 132 aaKnown RBP17■□□□□ 0.31
SEMA4D-220ENST00000492386 CDH5P33151 784 aaPredicted RBP17■□□□□ 0.31
SEMA4D-220ENST00000492386 GRM1Q13255 1194 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 ZNF394Q53GI3 561 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 MICALL2Q8IY33 904 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 ZBED8Q8IZ13 594 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 SLC35B2Q8TB61 432 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 ZNF518BQ9C0D4 1074 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 NIF3L1Q9GZT8 377 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 VPS37BQ9H9H4 285 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 PCDH9Q9HC56 1237 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 DDX56Q9NY93 547 aaKnown RBP17■□□□□ 0.31
SEMA4D-220ENST00000492386 GRID1Q9ULK0 1009 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 TRIM33Q9UPN9 1127 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 STARD13Q9Y3M8 1113 aa17■□□□□ 0.31
SEMA4D-220ENST00000492386 C19orf81C9J6K1 198 aa16.99■□□□□ 0.31
SEMA4D-220ENST00000492386 MSCO60682 206 aa16.99■□□□□ 0.31
SEMA4D-220ENST00000492386 CNTN2Q02246 1040 aa16.99■□□□□ 0.31
SEMA4D-220ENST00000492386 TAP1Q03518 808 aa16.99■□□□□ 0.31
SEMA4D-220ENST00000492386 PDE4CQ08493 712 aa16.99■□□□□ 0.31
SEMA4D-220ENST00000492386 CYP4A22Q5TCH4 519 aa16.99■□□□□ 0.31
SEMA4D-220ENST00000492386 RGS9BPQ6ZS82 235 aa16.99■□□□□ 0.31
SEMA4D-220ENST00000492386 ZBTB33Q86T24 672 aa16.99■□□□□ 0.31
SEMA4D-220ENST00000492386 GPATCH11Q8N954 259 aa16.99■□□□□ 0.31
SEMA4D-220ENST00000492386 SPOCK2Q92563 424 aa16.99■□□□□ 0.31
SEMA4D-220ENST00000492386 SPDYE16A6NNV3 312 aaPredicted RBP16.99■□□□□ 0.31
SEMA4D-220ENST00000492386 DNAJC3Q13217 504 aa16.99■□□□□ 0.31
SEMA4D-220ENST00000492386 PRAMEF18Q5VWM3 479 aa16.99■□□□□ 0.31
SEMA4D-220ENST00000492386 CAPN12Q6ZSI9 719 aa16.99■□□□□ 0.31
SEMA4D-220ENST00000492386 CENPUQ71F23 418 aa16.99■□□□□ 0.31
SEMA4D-220ENST00000492386 MAF1Q9H063 256 aa16.99■□□□□ 0.31
SEMA4D-220ENST00000492386 PCDHGC3Q9UN70 934 aa16.99■□□□□ 0.31
SEMA4D-220ENST00000492386 FARP1Q9Y4F1 1045 aaPredicted RBP16.99■□□□□ 0.31
SEMA4D-220ENST00000492386 SGK1O00141 431 aa16.98■□□□□ 0.31
SEMA4D-220ENST00000492386 HGSO14964 777 aaPredicted RBP16.98■□□□□ 0.31
SEMA4D-220ENST00000492386 KRT15P19012 456 aa16.98■□□□□ 0.31
SEMA4D-220ENST00000492386 UBA1P22314 1058 aaKnown RBP16.98■□□□□ 0.31
SEMA4D-220ENST00000492386 EIF4BP23588 611 aaKnown RBP16.98■□□□□ 0.31
SEMA4D-220ENST00000492386 RPA3P35244 121 aaPredicted RBP16.98■□□□□ 0.31
SEMA4D-220ENST00000492386 SKIV2L2P42285 1042 aaKnown RBP16.98■□□□□ 0.31
SEMA4D-220ENST00000492386 GMPSP49915 693 aaPredicted RBP16.98■□□□□ 0.31
SEMA4D-220ENST00000492386 IRX3P78415 501 aaPredicted RBP16.98■□□□□ 0.31
SEMA4D-220ENST00000492386 PDIA2Q13087 525 aaKnown RBP16.98■□□□□ 0.31
SEMA4D-220ENST00000492386 SPARCL1Q14515 664 aa16.98■□□□□ 0.31
SEMA4D-220ENST00000492386 RASA2Q15283 850 aa16.98■□□□□ 0.31
SEMA4D-220ENST00000492386 ACCSLQ4AC99 568 aa16.98■□□□□ 0.31
SEMA4D-220ENST00000492386 TLDC1Q6P9B6 456 aa16.98■□□□□ 0.31
SEMA4D-220ENST00000492386 ERICH1Q86X53 443 aa16.98■□□□□ 0.31
SEMA4D-220ENST00000492386 C4orf33Q8N1A6 199 aa16.98■□□□□ 0.31
SEMA4D-220ENST00000492386 DNERQ8NFT8 737 aa16.98■□□□□ 0.31
SEMA4D-220ENST00000492386 AGAP11Q8TF27 550 aa16.98■□□□□ 0.31
SEMA4D-220ENST00000492386 PRPF31Q8WWY3 499 aaKnown RBP16.98■□□□□ 0.31
SEMA4D-220ENST00000492386 SENP1Q9P0U3 644 aa16.98■□□□□ 0.31
SEMA4D-220ENST00000492386 SMG5Q9UPR3 1016 aaKnown RBP16.98■□□□□ 0.31
SEMA4D-220ENST00000492386 MGAMO43451 1857 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 BANF1O75531 89 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 TOM1L1O75674 476 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 FARP2O94887 1054 aaPredicted RBP16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 IFNB1P01574 187 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 WEE2P0C1S8 567 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 PSMC4P43686 418 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms