RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 RSPO2Q6UXX9 243 aaPredicted RBP16.92■□□□□ 0.3
TRA2A-208ENST00000490942 CYP26C1Q6V0L0 522 aa16.92■□□□□ 0.3
TRA2A-208ENST00000490942 RBM23Q86U06 439 aaKnown RBP16.92■□□□□ 0.3
TRA2A-208ENST00000490942 LUZP1Q86V48 1076 aa16.92■□□□□ 0.3
TRA2A-208ENST00000490942 OR10T2Q8NGX3 314 aa16.92■□□□□ 0.3
TRA2A-208ENST00000490942 TNIP3Q96KP6 325 aa16.92■□□□□ 0.3
TRA2A-208ENST00000490942 MRPL45Q9BRJ2 306 aaKnown RBP16.92■□□□□ 0.3
TRA2A-208ENST00000490942 INTS2Q9H0H0 1204 aaKnown RBP16.92■□□□□ 0.3
TRA2A-208ENST00000490942 TAB2Q9NYJ8 693 aa16.92■□□□□ 0.3
TRA2A-208ENST00000490942 FBXW11Q9UKB1 542 aa16.92■□□□□ 0.3
TRA2A-208ENST00000490942 POLIQ9UNA4 740 aa16.92■□□□□ 0.3
TRA2A-208ENST00000490942 WDR27A2RRH5 827 aa16.91■□□□□ 0.3
TRA2A-208ENST00000490942 PER2O15055 1255 aa16.91■□□□□ 0.3
TRA2A-208ENST00000490942 ADAM12O43184 909 aa16.91■□□□□ 0.3
TRA2A-208ENST00000490942 ATP1A3P13637 1013 aa16.91■□□□□ 0.3
TRA2A-208ENST00000490942 CPB1P15086 417 aa16.91■□□□□ 0.3
TRA2A-208ENST00000490942 PON1P27169 355 aa16.91■□□□□ 0.3
TRA2A-208ENST00000490942 HOXA9P31269 272 aa16.91■□□□□ 0.3
TRA2A-208ENST00000490942 FILIP1LQ4L180 1135 aa16.91■□□□□ 0.3
TRA2A-208ENST00000490942 FAM171BQ6P995 826 aa16.91■□□□□ 0.3
TRA2A-208ENST00000490942 CCDC149Q6ZUS6 474 aa16.91■□□□□ 0.3
TRA2A-208ENST00000490942 OSTM1Q86WC4 334 aa16.91■□□□□ 0.3
TRA2A-208ENST00000490942 TCEAL8Q8IYN2 117 aa16.91■□□□□ 0.3
TRA2A-208ENST00000490942 CRYBG2Q8N1P7 616 aa16.91■□□□□ 0.3
TRA2A-208ENST00000490942 CMASQ8NFW8 434 aaPredicted RBP16.91■□□□□ 0.3
TRA2A-208ENST00000490942 OR6B3Q8NGW1 331 aa16.91■□□□□ 0.3
TRA2A-208ENST00000490942 MAFAQ8NHW3 353 aaPredicted RBP16.91■□□□□ 0.3
TRA2A-208ENST00000490942 FUBP3Q96I24 572 aaKnown RBP eCLIP16.91■□□□□ 0.3
TRA2A-208ENST00000490942 PKMYT1Q99640 499 aa16.91■□□□□ 0.3
TRA2A-208ENST00000490942 SMYD3Q9H7B4 428 aa16.91■□□□□ 0.3
TRA2A-208ENST00000490942 ABCB6Q9NP58 842 aa16.91■□□□□ 0.3
TRA2A-208ENST00000490942 APEX2Q9UBZ4 518 aa16.91■□□□□ 0.3
TRA2A-208ENST00000490942 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.9■□□□□ 0.3
TRA2A-208ENST00000490942 A8MXQ7 604 aa16.9■□□□□ 0.3
TRA2A-208ENST00000490942 LRRN2O75325 713 aa16.9■□□□□ 0.3
TRA2A-208ENST00000490942 CILPO75339 1184 aa16.9■□□□□ 0.3
TRA2A-208ENST00000490942 CSPG5O95196 566 aa16.9■□□□□ 0.3
TRA2A-208ENST00000490942 CFAP221Q4G0U5 840 aa16.9■□□□□ 0.3
TRA2A-208ENST00000490942 MICALL1Q8N3F8 863 aa16.9■□□□□ 0.3
TRA2A-208ENST00000490942 KREMEN2Q8NCW0 462 aa16.9■□□□□ 0.3
TRA2A-208ENST00000490942 SPPL2BQ8TCT7 592 aa16.9■□□□□ 0.3
TRA2A-208ENST00000490942 TATDN2Q93075 761 aa16.9■□□□□ 0.3
TRA2A-208ENST00000490942 ERGIC2Q96RQ1 377 aa16.9■□□□□ 0.3
TRA2A-208ENST00000490942 SYT15Q9BQS2 421 aa16.9■□□□□ 0.3
TRA2A-208ENST00000490942 SDCBP2Q9H190 292 aa16.9■□□□□ 0.3
TRA2A-208ENST00000490942 VPS16Q9H269 839 aa16.9■□□□□ 0.3
TRA2A-208ENST00000490942 PLCB1Q9NQ66 1216 aa16.9■□□□□ 0.3
TRA2A-208ENST00000490942 ZDHHC7Q9NXF8 308 aa16.9■□□□□ 0.3
TRA2A-208ENST00000490942 A0A1B0GTH6 734 aa16.89■□□□□ 0.29
TRA2A-208ENST00000490942 GLP2RO95838 553 aa16.89■□□□□ 0.29
TRA2A-208ENST00000490942 HNRNPA1P09651 372 aaKnown RBP eCLIP16.89■□□□□ 0.29
TRA2A-208ENST00000490942 WEE2P0C1S8 567 aa16.89■□□□□ 0.29
TRA2A-208ENST00000490942 LMO2P25791 158 aa16.89■□□□□ 0.29
TRA2A-208ENST00000490942 CDH8P55286 799 aa16.89■□□□□ 0.29
TRA2A-208ENST00000490942 LIN9Q5TKA1 542 aa16.89■□□□□ 0.29
TRA2A-208ENST00000490942 PHLDB3Q6NSJ2 640 aa16.89■□□□□ 0.29
TRA2A-208ENST00000490942 C4orf50Q6ZRC1 276 aa16.89■□□□□ 0.29
TRA2A-208ENST00000490942 PALB2Q86YC2 1186 aa16.89■□□□□ 0.29
TRA2A-208ENST00000490942 PPM1KQ8N3J5 372 aa16.89■□□□□ 0.29
TRA2A-208ENST00000490942 UBR7Q8N806 425 aa16.89■□□□□ 0.29
TRA2A-208ENST00000490942 VN1R2Q8NFZ6 395 aa16.89■□□□□ 0.29
TRA2A-208ENST00000490942 MYCBPAPQ8TBZ2 947 aa16.89■□□□□ 0.29
TRA2A-208ENST00000490942 CEP295NLQ96MC4 621 aa16.89■□□□□ 0.29
TRA2A-208ENST00000490942 NT5C1AQ9BXI3 368 aa16.89■□□□□ 0.29
TRA2A-208ENST00000490942 SFXN1Q9H9B4 322 aa16.89■□□□□ 0.29
TRA2A-208ENST00000490942 RTN4Q9NQC3 1192 aaKnown RBP16.89■□□□□ 0.29
TRA2A-208ENST00000490942 CISHQ9NSE2 258 aa16.89■□□□□ 0.29
TRA2A-208ENST00000490942 CNTN6Q9UQ52 1028 aa16.89■□□□□ 0.29
TRA2A-208ENST00000490942 A0A1W2PQC6 194 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 MTMR11A4FU01 709 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 PES1O00541 588 aaKnown RBP16.88■□□□□ 0.29
TRA2A-208ENST00000490942 ZMYND10O75800 440 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 EPCAMP16422 314 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 SLC9A1P19634 815 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 ELF1P32519 619 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 GTF2F1P35269 517 aaKnown RBP eCLIP16.88■□□□□ 0.297e-10■□□□□ 10.7
TRA2A-208ENST00000490942 TUFMP49411 452 aaKnown RBP16.88■□□□□ 0.29
TRA2A-208ENST00000490942 MFAP3P55082 362 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 KCNMA1Q12791 1236 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 PLD1Q13393 1074 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 ANKRD54Q6NXT1 300 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 SCARA5Q6ZMJ2 495 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 LRRTM3Q86VH5 581 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 B3GALNT2Q8NCR0 500 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 HLA-CQ95604 372 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 CRACR2AQ9BSW2 395 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 IGFLR1Q9H665 355 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 MAN1C1Q9NR34 630 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 CLDND1Q9NY35 253 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 CLEC1BQ9P126 229 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 KIAA1257Q9ULG3 409 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 NME7Q9Y5B8 376 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 PCDHB5Q9Y5E4 795 aa16.88■□□□□ 0.29
TRA2A-208ENST00000490942 SERPINC1P01008 464 aa16.87■□□□□ 0.29
TRA2A-208ENST00000490942 PTPN1P18031 435 aaKnown RBP16.87■□□□□ 0.29
TRA2A-208ENST00000490942 ACO1P21399 889 aaKnown RBP16.87■□□□□ 0.29
TRA2A-208ENST00000490942 LTBRP36941 435 aa16.87■□□□□ 0.29
TRA2A-208ENST00000490942 MAGEA11P43364 429 aa16.87■□□□□ 0.29
TRA2A-208ENST00000490942 RAP1GAPP47736 663 aa16.87■□□□□ 0.29
TRA2A-208ENST00000490942 NDST1P52848 882 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms