RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 SATB1Q01826 763 aa16.91■□□□□ 0.3
NUP58-213ENST00000490231 WSCD1Q658N2 575 aa16.91■□□□□ 0.3
NUP58-213ENST00000490231 LRRTM3Q86VH5 581 aa16.91■□□□□ 0.3
NUP58-213ENST00000490231 GPIHBP1Q8IV16 184 aa16.91■□□□□ 0.3
NUP58-213ENST00000490231 DCP1BQ8IZD4 617 aaKnown RBP16.91■□□□□ 0.3
NUP58-213ENST00000490231 BPIFB1Q8TDL5 484 aa16.91■□□□□ 0.3
NUP58-213ENST00000490231 ZNF560Q96MR9 790 aa16.91■□□□□ 0.3
NUP58-213ENST00000490231 IKZF4Q9H2S9 585 aa16.91■□□□□ 0.3
NUP58-213ENST00000490231 MRPL44Q9H9J2 332 aaKnown RBP16.91■□□□□ 0.3
NUP58-213ENST00000490231 GMEB2Q9UKD1 530 aa16.91■□□□□ 0.3
NUP58-213ENST00000490231 TSC2P49815 1807 aa16.91■□□□□ 0.3
NUP58-213ENST00000490231 MED19A0JLT2 244 aaPredicted RBP16.9■□□□□ 0.3
NUP58-213ENST00000490231 MYMKA6NI61 221 aa16.9■□□□□ 0.3
NUP58-213ENST00000490231 PRAMEF12O95522 483 aa16.9■□□□□ 0.3
NUP58-213ENST00000490231 HAPLN1P10915 354 aaPredicted RBP16.9■□□□□ 0.3
NUP58-213ENST00000490231 TGM1P22735 817 aa16.9■□□□□ 0.3
NUP58-213ENST00000490231 TXLNAP40222 546 aa16.9■□□□□ 0.3
NUP58-213ENST00000490231 CYP4F8P98187 520 aa16.9■□□□□ 0.3
NUP58-213ENST00000490231 LMNB2Q03252 620 aa16.9■□□□□ 0.3
NUP58-213ENST00000490231 TAF12Q16514 161 aa16.9■□□□□ 0.3
NUP58-213ENST00000490231 WDR44Q5JSH3 913 aa16.9■□□□□ 0.3
NUP58-213ENST00000490231 L1TD1Q5T7N2 865 aaKnown RBP16.9■□□□□ 0.3
NUP58-213ENST00000490231 RRAGBQ5VZM2 374 aa16.9■□□□□ 0.3
NUP58-213ENST00000490231 LAIR1Q6GTX8 287 aa16.9■□□□□ 0.3
NUP58-213ENST00000490231 TXNDC11Q6PKC3 985 aa16.9■□□□□ 0.3
NUP58-213ENST00000490231 SV2BQ7L1I2 683 aa16.9■□□□□ 0.3
NUP58-213ENST00000490231 SYNPOQ8N3V7 929 aa16.9■□□□□ 0.3
NUP58-213ENST00000490231 DNAJC19Q96DA6 116 aa16.9■□□□□ 0.3
NUP58-213ENST00000490231 ZFYVE19Q96K21 471 aa16.9■□□□□ 0.3
NUP58-213ENST00000490231 ACCSQ96QU6 501 aa16.9■□□□□ 0.3
NUP58-213ENST00000490231 SLC46A2Q9BY10 475 aa16.9■□□□□ 0.3
NUP58-213ENST00000490231 OLFML3Q9NRN5 406 aa16.9■□□□□ 0.3
NUP58-213ENST00000490231 RBM12Q9NTZ6 932 aaKnown RBP16.9■□□□□ 0.3
NUP58-213ENST00000490231 THG1LQ9NWX6 298 aaKnown RBP16.9■□□□□ 0.3
NUP58-213ENST00000490231 GTSE1Q9NYZ3 720 aa16.9■□□□□ 0.3
NUP58-213ENST00000490231 RAB23Q9ULC3 237 aa16.9■□□□□ 0.3
NUP58-213ENST00000490231 LDHAP00338 332 aaKnown RBP16.89■□□□□ 0.29
NUP58-213ENST00000490231 CNR2P34972 360 aa16.89■□□□□ 0.29
NUP58-213ENST00000490231 KCNA1Q09470 495 aa16.89■□□□□ 0.29
NUP58-213ENST00000490231 BRSK2Q8IWQ3 736 aa16.89■□□□□ 0.29
NUP58-213ENST00000490231 CMTM8Q8IZV2 173 aa16.89■□□□□ 0.29
NUP58-213ENST00000490231 GIPC2Q8TF65 315 aa16.89■□□□□ 0.29
NUP58-213ENST00000490231 FAM213AQ9BRX8 229 aa16.89■□□□□ 0.29
NUP58-213ENST00000490231 ABI2Q9NYB9 513 aaPredicted RBP16.89■□□□□ 0.29
NUP58-213ENST00000490231 PCDHB5Q9Y5E4 795 aa16.89■□□□□ 0.29
NUP58-213ENST00000490231 PCDHB13Q9Y5F0 798 aa16.89■□□□□ 0.29
NUP58-213ENST00000490231 MORC2Q9Y6X9 1032 aaPredicted RBP16.89■□□□□ 0.29
NUP58-213ENST00000490231 SOBPA7XYQ1 873 aa16.88■□□□□ 0.29
NUP58-213ENST00000490231 K7ESF4 209 aa16.88■□□□□ 0.29
NUP58-213ENST00000490231 HMGA1P17096 107 aaKnown RBP16.88■□□□□ 0.29
NUP58-213ENST00000490231 GARTP22102 1010 aa16.88■□□□□ 0.29
NUP58-213ENST00000490231 DDX6P26196 483 aaKnown RBP eCLIP16.88■□□□□ 0.29
NUP58-213ENST00000490231 TSPY1Q01534 308 aa16.88■□□□□ 0.29
NUP58-213ENST00000490231 ALCAMQ13740 583 aa16.88■□□□□ 0.29
NUP58-213ENST00000490231 CCINQ13939 588 aa16.88■□□□□ 0.29
NUP58-213ENST00000490231 NFE2Q16621 373 aaPredicted RBP16.88■□□□□ 0.29
NUP58-213ENST00000490231 Q6ZS52 159 aa16.88■□□□□ 0.29
NUP58-213ENST00000490231 LONP2Q86WA8 852 aa16.88■□□□□ 0.29
NUP58-213ENST00000490231 TTC8Q8TAM2 541 aa16.88■□□□□ 0.29
NUP58-213ENST00000490231 LEO1Q8WVC0 666 aaPredicted RBP16.88■□□□□ 0.29
NUP58-213ENST00000490231 CLIC6Q96NY7 704 aa16.88■□□□□ 0.29
NUP58-213ENST00000490231 USP18Q9UMW8 372 aa16.88■□□□□ 0.29
NUP58-213ENST00000490231 GPR179Q6PRD1 2367 aa16.88■□□□□ 0.29
NUP58-213ENST00000490231 FRMD3A2A2Y4 597 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 LRP3O75074 770 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 GCNT3O95395 438 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 F11P03951 625 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 ITGB3P05106 788 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 RETP07949 1114 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 POLR2BP30876 1174 aaKnown RBP16.87■□□□□ 0.29
NUP58-213ENST00000490231 HOXA6P31267 233 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 AVPR1AP37288 418 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 CDR1P51861 262 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 WNT7BP56706 349 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 NLRP12P59046 1061 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 TFAMQ00059 246 aaKnown RBP16.87■□□□□ 0.29
NUP58-213ENST00000490231 TNK2Q07912 1038 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 RESTQ13127 1097 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 PON2Q15165 354 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 ITPRIPL2Q3MIP1 535 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 CCDC73Q6ZRK6 1079 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 TMEM150AQ86TG1 271 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 TMEM86AQ8N2M4 240 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 PDCL2Q8N4E4 241 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 LRRC52Q8N7C0 313 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 C1orf127Q8N9H9 656 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 CACTINQ8WUQ7 758 aaKnown RBP16.87■□□□□ 0.29
NUP58-213ENST00000490231 SAAL1Q96ER3 474 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 FAM83CQ9BQN1 747 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 ACBD6Q9BR61 282 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 KIF9Q9HAQ2 790 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 ABCB6Q9NP58 842 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 PARD6AQ9NPB6 346 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 TMLHEQ9NVH6 421 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 RBAKQ9NYW8 714 aaPredicted RBP16.87■□□□□ 0.29
NUP58-213ENST00000490231 TBC1D7Q9P0N9 293 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 AGAP1Q9UPQ3 857 aa16.87■□□□□ 0.29
NUP58-213ENST00000490231 NUP210Q8TEM1 1887 aaPredicted RBP16.86■□□□□ 0.29
NUP58-213ENST00000490231 CHURC1-FNTBB4DL54 471 aa16.86■□□□□ 0.29
NUP58-213ENST00000490231 HRO43593 1189 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms