RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 ITIH5Q86UX2 942 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 KBTBD6Q86V97 674 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 CAMKK1Q8N5S9 505 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 TMEM161BQ8NDZ6 487 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 COL26A1Q96A83 441 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 CHFRQ96EP1 664 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 TSPAN18Q96SJ8 248 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 FAM83CQ9BQN1 747 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 ATXN3LQ9H3M9 355 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 IL21Q9HBE4 155 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 SH2B1Q9NRF2 756 aaPredicted RBP8.91□□□□□ -0.98
USP39-216ENST00000490193 VPS45Q9NRW7 570 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 UBQLN1Q9UMX0 589 aaKnown RBP8.91□□□□□ -0.98
USP39-216ENST00000490193 DNM3Q9UQ16 869 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 TIMM13Q9Y5L4 95 aaPredicted RBP8.91□□□□□ -0.98
USP39-216ENST00000490193 PKD1L2Q7Z442 2459 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 ATG2BQ96BY7 2078 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 TCHHQ07283 1943 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 WDFY3Q8IZQ1 3526 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 SOBPA7XYQ1 873 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 E9PMD0 336 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 TRDMT1O14717 391 aaKnown RBP8.9□□□□□ -0.98
USP39-216ENST00000490193 SLC16A4O15374 487 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 CLDN3O15551 220 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 XPOTO43592 962 aaKnown RBP8.9□□□□□ -0.98
USP39-216ENST00000490193 CYP11A1P05108 521 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 CCDC192P0DO97 292 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 MAPTP10636 758 aaKnown RBP8.9□□□□□ -0.98
USP39-216ENST00000490193 HARSP12081 509 aaKnown RBP8.9□□□□□ -0.98
USP39-216ENST00000490193 CDC25CP30307 473 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 STRN3Q13033 797 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 CCDC6Q16204 474 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 KYAT1Q16773 422 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 PLK5Q496M5 336 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 SEZ6Q53EL9 994 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 FSTL4Q6MZW2 842 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 TTC9BQ8N6N2 239 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 ATAD1Q8NBU5 361 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 TTC8Q8TAM2 541 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 SNX29Q8TEQ0 813 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 RUSC1Q9BVN2 902 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 RAB34Q9BZG1 259 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 HAPLN2Q9GZV7 340 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 HPS4Q9NQG7 708 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 THG1LQ9NWX6 298 aaKnown RBP8.9□□□□□ -0.98
USP39-216ENST00000490193 ANKFY1Q9P2R3 1169 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 SLC8A2Q9UPR5 921 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 WASF3Q9UPY6 502 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 SLC27A5Q9Y2P5 690 aa8.9□□□□□ -0.98
USP39-216ENST00000490193 SCN1AP35498 2009 aa8.9□□□□□ -0.99
USP39-216ENST00000490193 IGF2RP11717 2491 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 FAM189A1O60320 539 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 ODC1P11926 461 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 PLS3P13797 630 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 ATF6P18850 670 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 PXNP49023 591 aaPredicted RBP8.89□□□□□ -0.99
USP39-216ENST00000490193 TUFMP49411 452 aaKnown RBP8.89□□□□□ -0.99
USP39-216ENST00000490193 LILRA4P59901 499 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 CYP4F8P98187 520 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 GUCY1B3Q02153 619 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 PPP2R3AQ06190 1150 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 SMARCB1Q12824 385 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 GRSF1Q12849 480 aaKnown RBP eCLIP8.89□□□□□ -0.99
USP39-216ENST00000490193 RUNX3Q13761 415 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 VEPH1Q14D04 833 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 KARSQ15046 597 aaKnown RBP8.89□□□□□ -0.99
USP39-216ENST00000490193 FBXO43Q4G163 708 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 HYIQ5T013 277 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 SPATA1Q5VX52 437 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 RNF43Q68DV7 783 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 ARMCX5Q6P1M9 558 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 DSTYKQ6XUX3 929 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 KCNK18Q7Z418 384 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 GPIHBP1Q8IV16 184 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 CMTM8Q8IZV2 173 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 TMEM130Q8N3G9 435 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 KCTD17Q8N5Z5 321 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 KDF1Q8NAX2 398 aaPredicted RBP8.89□□□□□ -0.99
USP39-216ENST00000490193 FBXO18Q8NFZ0 1043 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 C8orf76Q96K31 380 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 SENP8Q96LD8 212 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 GCNAQ96QF7 691 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 MMTAG2Q9BU76 263 aaKnown RBP8.89□□□□□ -0.99
USP39-216ENST00000490193 SLC46A2Q9BY10 475 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 DUSP15Q9H1R2 295 aaPredicted RBP8.89□□□□□ -0.99
USP39-216ENST00000490193 KIF9Q9HAQ2 790 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 GKN1Q9NS71 199 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 EBF1Q9UH73 591 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 AKAP13Q12802 2813 aa8.89□□□□□ -0.99
USP39-216ENST00000490193 ZFYVE26Q68DK2 2539 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 PTPRDP23468 1912 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 HELZP42694 1942 aaKnown RBP8.88□□□□□ -0.99
USP39-216ENST00000490193 ANO9A1A5B4 782 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 BCLAF3A2AJT9 711 aaKnown RBP8.88□□□□□ -0.99
USP39-216ENST00000490193 TMEM8BA6NDV4 472 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 OTOL1A6NHN0 477 aaPredicted RBP8.88□□□□□ -0.99
USP39-216ENST00000490193 SFI1A8K8P3 1242 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 LACTBL1A8MY62 500 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 H0YCG3 227 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 LAD1O00515 517 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms