RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 HRO43593 1189 aa12.88□□□□□ -0.35
SFXN3-207ENST00000489434 PLCG1P19174 1290 aa12.88□□□□□ -0.35
SFXN3-207ENST00000489434 AVPR1AP37288 418 aa12.88□□□□□ -0.35
SFXN3-207ENST00000489434 TSPY1Q01534 308 aa12.88□□□□□ -0.35
SFXN3-207ENST00000489434 MCM6Q14566 821 aa12.88□□□□□ -0.35
SFXN3-207ENST00000489434 POSTNQ15063 836 aa12.88□□□□□ -0.35
SFXN3-207ENST00000489434 CSRP2Q16527 193 aa12.88□□□□□ -0.35
SFXN3-207ENST00000489434 SV2CQ496J9 727 aa12.88□□□□□ -0.35
SFXN3-207ENST00000489434 CC2D1AQ6P1N0 951 aaPredicted RBP12.88□□□□□ -0.35
SFXN3-207ENST00000489434 Q6ZS52 159 aa12.88□□□□□ -0.35
SFXN3-207ENST00000489434 LARP4BQ92615 738 aaKnown RBP12.88□□□□□ -0.35
SFXN3-207ENST00000489434 EXOC4Q96A65 974 aa12.88□□□□□ -0.35
SFXN3-207ENST00000489434 TMX3Q96JJ7 454 aa12.88□□□□□ -0.35
SFXN3-207ENST00000489434 ZNF560Q96MR9 790 aa12.88□□□□□ -0.35
SFXN3-207ENST00000489434 TMEM209Q96SK2 561 aa12.88□□□□□ -0.35
SFXN3-207ENST00000489434 LPIN3Q9BQK8 851 aa12.88□□□□□ -0.35
SFXN3-207ENST00000489434 MKNK1Q9BUB5 465 aa12.88□□□□□ -0.35
SFXN3-207ENST00000489434 SEMA4GQ9NTN9 838 aa12.88□□□□□ -0.35
SFXN3-207ENST00000489434 ABI2Q9NYB9 513 aaPredicted RBP12.88□□□□□ -0.35
SFXN3-207ENST00000489434 K7ESF4 209 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 TULP1O00294 542 aaPredicted RBP12.87□□□□□ -0.35
SFXN3-207ENST00000489434 SLC30A4O14863 429 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 ATG13O75143 517 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 IL18RAPO95256 599 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 PRAMEF12O95522 483 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 DDX6P26196 483 aaKnown RBP eCLIP12.87□□□□□ -0.35
SFXN3-207ENST00000489434 NMT1P30419 496 aaKnown RBP12.87□□□□□ -0.35
SFXN3-207ENST00000489434 PNPLA4P41247 253 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 CYP4F8P98187 520 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 TNK2Q07912 1038 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 GRSF1Q12849 480 aaKnown RBP eCLIP12.87□□□□□ -0.35
SFXN3-207ENST00000489434 BFSP1Q12934 665 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 CCINQ13939 588 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 KARSQ15046 597 aaKnown RBP12.87□□□□□ -0.35
SFXN3-207ENST00000489434 WSCD1Q658N2 575 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 LARP1BQ659C4 914 aaKnown RBP12.87□□□□□ -0.35
SFXN3-207ENST00000489434 SLC39A4Q6P5W5 647 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 TXNDC11Q6PKC3 985 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 PRR23CQ6ZRP0 262 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 BRAPQ7Z569 592 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 NT5DC4Q86YG4 428 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 CMTM8Q8IZV2 173 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 GIPC2Q8TF65 315 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 POMGNT1Q8WZA1 660 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 DDX1Q92499 740 aaKnown RBP12.87□□□□□ -0.35
SFXN3-207ENST00000489434 HVCN1Q96D96 273 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 LRRC3BQ96PB8 259 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 CCSER1Q9C0I3 900 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 ST6GALNAC4Q9H4F1 302 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 UPF2Q9HAU5 1272 aaKnown RBP12.87□□□□□ -0.35
SFXN3-207ENST00000489434 GKN1Q9NS71 199 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 BLOC1S4Q9NUP1 217 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 EXOC7Q9UPT5 735 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.87□□□□□ -0.35
SFXN3-207ENST00000489434 PCDHB5Q9Y5E4 795 aa12.87□□□□□ -0.35
SFXN3-207ENST00000489434 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.87□□□□□ -0.35
SFXN3-207ENST00000489434 SOBPA7XYQ1 873 aa12.86□□□□□ -0.35
SFXN3-207ENST00000489434 KPNA7A9QM74 516 aa12.86□□□□□ -0.35
SFXN3-207ENST00000489434 ANKRD63C9JTQ0 380 aa12.86□□□□□ -0.35
SFXN3-207ENST00000489434 HAPLN1P10915 354 aaPredicted RBP12.86□□□□□ -0.35
SFXN3-207ENST00000489434 ATF6P18850 670 aa12.86□□□□□ -0.35
SFXN3-207ENST00000489434 DDIT3P35638 169 aa12.86□□□□□ -0.35
SFXN3-207ENST00000489434 DMWDQ09019 674 aa12.86□□□□□ -0.35
SFXN3-207ENST00000489434 NFE2Q16621 373 aaPredicted RBP12.86□□□□□ -0.35
SFXN3-207ENST00000489434 ZC2HC1CQ53FD0 456 aaPredicted RBP12.86□□□□□ -0.35
SFXN3-207ENST00000489434 WDR5BQ86VZ2 330 aa12.86□□□□□ -0.35
SFXN3-207ENST00000489434 FAM160A2Q8N612 972 aaPredicted RBP12.86□□□□□ -0.35
SFXN3-207ENST00000489434 MRPS31Q92665 395 aaKnown RBP12.86□□□□□ -0.35
SFXN3-207ENST00000489434 CNTNAP3BQ96NU0 1288 aa12.86□□□□□ -0.35
SFXN3-207ENST00000489434 SLC46A2Q9BY10 475 aa12.86□□□□□ -0.35
SFXN3-207ENST00000489434 CNTNAP3Q9BZ76 1288 aa12.86□□□□□ -0.35
SFXN3-207ENST00000489434 KIF9Q9HAQ2 790 aa12.86□□□□□ -0.35
SFXN3-207ENST00000489434 IL21Q9HBE4 155 aa12.86□□□□□ -0.35
SFXN3-207ENST00000489434 SLC8A2Q9UPR5 921 aa12.86□□□□□ -0.35
SFXN3-207ENST00000489434 STYXL1Q9Y6J8 313 aa12.86□□□□□ -0.35
SFXN3-207ENST00000489434 MAP1BP46821 2468 aaKnown RBP12.86□□□□□ -0.35
SFXN3-207ENST00000489434 TSC2P49815 1807 aa12.85□□□□□ -0.35
SFXN3-207ENST00000489434 KIF26AQ9ULI4 1882 aaPredicted RBP12.85□□□□□ -0.35
SFXN3-207ENST00000489434 CCDC163A0A0D9SF12 145 aa12.85□□□□□ -0.35
SFXN3-207ENST00000489434 CSH1P0DML2 217 aa12.85□□□□□ -0.35
SFXN3-207ENST00000489434 CSH2P0DML3 217 aa12.85□□□□□ -0.35
SFXN3-207ENST00000489434 TXLNAP40222 546 aa12.85□□□□□ -0.35
SFXN3-207ENST00000489434 CDR1P51861 262 aa12.85□□□□□ -0.35
SFXN3-207ENST00000489434 NLRP12P59046 1061 aa12.85□□□□□ -0.35
SFXN3-207ENST00000489434 TFAMQ00059 246 aaKnown RBP12.85□□□□□ -0.35
SFXN3-207ENST00000489434 SRSF5Q13243 272 aaKnown RBP12.85□□□□□ -0.35
SFXN3-207ENST00000489434 RUNX3Q13761 415 aa12.85□□□□□ -0.35
SFXN3-207ENST00000489434 PPM1JQ5JR12 505 aa12.85□□□□□ -0.35
SFXN3-207ENST00000489434 IL31Q6EBC2 164 aa12.85□□□□□ -0.35
SFXN3-207ENST00000489434 MAB21L3Q8N8X9 362 aa12.85□□□□□ -0.35
SFXN3-207ENST00000489434 C12orf50Q8NA57 414 aaPredicted RBP12.85□□□□□ -0.35
SFXN3-207ENST00000489434 CACTINQ8WUQ7 758 aaKnown RBP12.85□□□□□ -0.35
SFXN3-207ENST00000489434 LOXL4Q96JB6 756 aa12.85□□□□□ -0.35
SFXN3-207ENST00000489434 SMG9Q9H0W8 520 aaKnown RBP12.85□□□□□ -0.35
SFXN3-207ENST00000489434 MRPL44Q9H9J2 332 aaKnown RBP12.85□□□□□ -0.35
SFXN3-207ENST00000489434 TDP1Q9NUW8 608 aa12.85□□□□□ -0.35
SFXN3-207ENST00000489434 UXTQ9UBK9 157 aaPredicted RBP12.85□□□□□ -0.35
SFXN3-207ENST00000489434 SEL1LQ9UBV2 794 aa12.85□□□□□ -0.35
SFXN3-207ENST00000489434 STK17AQ9UEE5 414 aa12.85□□□□□ -0.35
SFXN3-207ENST00000489434 CCDC39Q9UFE4 941 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms