RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 ROPN1BQ9BZX4 212 aaPredicted RBP9.36□□□□□ -0.91
CSMD2-209ENST00000489419 TRIM6Q9C030 488 aaPredicted RBP9.36□□□□□ -0.91
CSMD2-209ENST00000489419 INO80BQ9C086 356 aaPredicted RBP9.36□□□□□ -0.91
CSMD2-209ENST00000489419 EPB41L4BQ9H329 900 aa9.36□□□□□ -0.91
CSMD2-209ENST00000489419 ASB7Q9H672 318 aa9.36□□□□□ -0.91
CSMD2-209ENST00000489419 VRTNQ9H8Y1 702 aa9.36□□□□□ -0.91
CSMD2-209ENST00000489419 ROPN1Q9HAT0 212 aaPredicted RBP9.36□□□□□ -0.91
CSMD2-209ENST00000489419 STRIP2Q9ULQ0 834 aa9.36□□□□□ -0.91
CSMD2-209ENST00000489419 EBAG9O00559 213 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 TMOD1P28289 359 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 CCNHP51946 323 aaPredicted RBP9.35□□□□□ -0.91
CSMD2-209ENST00000489419 PPP2R2AP63151 447 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 HHATQ5VTY9 493 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 TAPT1Q6NXT6 567 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 B4GALNT4Q76KP1 1039 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 PASD1Q8IV76 773 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 TTC39CQ8N584 583 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 OR2W6PQ8NHA6 318 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 PPTC7Q8NI37 304 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 UPF1Q92900 1129 aaKnown RBP eCLIP9.35□□□□□ -0.91
CSMD2-209ENST00000489419 SNF8Q96H20 258 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 BCO2Q9BYV7 579 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 OSBPL8Q9BZF1 889 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 STMN4Q9H169 189 aaPredicted RBP9.35□□□□□ -0.91
CSMD2-209ENST00000489419 CDT1Q9H211 546 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 CYP3A43Q9HB55 503 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 SLC12A6Q9UHW9 1150 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 INSRRP14616 1297 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 ASPAP45381 313 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 KCNJ1P48048 391 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 GCLCP48506 637 aaPredicted RBP9.35□□□□□ -0.91
CSMD2-209ENST00000489419 ATP1A2P50993 1020 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 KRT17Q04695 432 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 PDCLQ13371 301 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 ODF2Q5BJF6 829 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 PPP1R15BQ5SWA1 713 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 WDR78Q5VTH9 848 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 DNAJC24Q6P3W2 148 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 RHBDF2Q6PJF5 856 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 ERICH1Q86X53 443 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 NT5DC4Q86YG4 428 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 THNSL1Q8IYQ7 743 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 CCHCR1Q8TD31 782 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 MICAL1Q8TDZ2 1067 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 C1orf54Q8WWF1 131 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 COPS5Q92905 334 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 RNF25Q96BH1 459 aaPredicted RBP9.35□□□□□ -0.91
CSMD2-209ENST00000489419 CENPTQ96BT3 561 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 NLRP4Q96MN2 994 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 PLEKHG4BQ96PX9 1271 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 RNPEPQ9H4A4 650 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 IFT122Q9HBG6 1241 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 DDX56Q9NY93 547 aaKnown RBP9.35□□□□□ -0.91
CSMD2-209ENST00000489419 LMCD1Q9NZU5 365 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 WDR35Q9P2L0 1181 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 GGA2Q9UJY4 613 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 EFR3BQ9Y2G0 817 aa9.35□□□□□ -0.91
CSMD2-209ENST00000489419 EME2A4GXA9 379 aaPredicted RBP9.34□□□□□ -0.91
CSMD2-209ENST00000489419 NDC80O14777 642 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 LGALS2P05162 132 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 RALAP11233 206 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 CETPP11597 493 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 P4HA1P13674 534 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 IVDP26440 423 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 GJA5P36382 358 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 CLCN3P51790 818 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 TAS2R40P59535 323 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 IFT88Q13099 833 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 PTGISQ16647 500 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 ZNF667Q5HYK9 610 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 EEF1DP3Q658K8 133 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 MAMDC4Q6UXC1 1216 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 POLNQ7Z5Q5 900 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 CCDC89Q8N998 374 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 FNIP1Q8TF40 1166 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 TRAPPC12Q8WVT3 735 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 C17orf50Q8WW18 174 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 TRAIPQ9BWF2 469 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 CENPHQ9H3R5 247 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 PDGFCQ9NRA1 345 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 MORF4L1Q9UBU8 362 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 NOVA2Q9UNW9 492 aaKnown RBP9.34□□□□□ -0.91
CSMD2-209ENST00000489419 PTPN22Q9Y2R2 807 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 NEU2Q9Y3R4 380 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 RIPK2O43353 540 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 TJP3O95049 919 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 STAU1O95793 577 aaKnown RBP9.34□□□□□ -0.91
CSMD2-209ENST00000489419 AGTP01019 485 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 CORO7P57737 925 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 LACTBP83111 547 aaPredicted RBP9.34□□□□□ -0.91
CSMD2-209ENST00000489419 NFX1Q12986 1120 aaKnown RBP9.34□□□□□ -0.91
CSMD2-209ENST00000489419 SLC29A2Q14542 456 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 AMHR2Q16671 573 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 DCUN1D2Q6PH85 259 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 FOXR1Q6PIV2 292 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 PNMA8AQ86V59 439 aaPredicted RBP9.34□□□□□ -0.91
CSMD2-209ENST00000489419 RELL1Q8IUW5 271 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 CCDC50Q8IVM0 306 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 WDTC1Q8N5D0 677 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 ARMC2Q8NEN0 867 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms